GE213432
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of GE213432 vs. ExPASy Swiss-Prot
Match: PSBR_ARATH (Photosystem II 10 kDa polypeptide, chloroplastic OS=Arabidopsis thaliana GN=PSBR PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.232e-18 Identity = 43/58 (74.14%), Postives = 45/58 (77.59%), Query Frame = -2 Query: 95 RYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTXXXXXXXXXXLVYNTSALAQ 268 +YGANVDGYSPIYNEN+WS SGDVY GG TGLAIWAVT LVYNTSALAQ Sbjct: 83 KYGANVDGYSPIYNENEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNTSALAQ 140
BLAST of GE213432 vs. ExPASy Swiss-Prot
Match: PSBR_TOBAC (Photosystem II 10 kDa polypeptide, chloroplastic OS=Nicotiana tabacum GN=PSBR PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.063e-17 Identity = 42/58 (72.41%), Postives = 45/58 (77.59%), Query Frame = -2 Query: 95 RYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTXXXXXXXXXXLVYNTSALAQ 268 +YGANVDGYSPIYN +DWSPSGDVY GG TGLAIWAVT LV+NTSALAQ Sbjct: 79 KYGANVDGYSPIYNTDDWSPSGDVYVGGTTGLAIWAVTLVGILAGGALLVFNTSALAQ 136
BLAST of GE213432 vs. ExPASy Swiss-Prot
Match: PSBR_SOLTU (Photosystem II 10 kDa polypeptide, chloroplastic OS=Solanum tuberosum GN=PSBR PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.063e-17 Identity = 42/58 (72.41%), Postives = 45/58 (77.59%), Query Frame = -2 Query: 95 RYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTXXXXXXXXXXLVYNTSALAQ 268 +YGANVDGYSPIYN ++WSPSGDVY GG TGLAIWAVT LVYNTSALAQ Sbjct: 81 KYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTLVGILAGGALLVYNTSALAQ 138
BLAST of GE213432 vs. ExPASy Swiss-Prot
Match: PSBR_SOLLC (Photosystem II 10 kDa polypeptide, chloroplastic OS=Solanum lycopersicum GN=PSBR PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.063e-17 Identity = 42/58 (72.41%), Postives = 45/58 (77.59%), Query Frame = -2 Query: 95 RYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTXXXXXXXXXXLVYNTSALAQ 268 +YGANVDGYSPIYN ++WSPSGDVY GG TGLAIWAVT LVYNTSALAQ Sbjct: 81 KYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTLLGILAGGALLVYNTSALAQ 138
BLAST of GE213432 vs. ExPASy Swiss-Prot
Match: PSBR_BRACM (Photosystem II 10 kDa polypeptide, chloroplastic OS=Brassica campestris GN=PSBR PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.368e-17 Identity = 42/58 (72.41%), Postives = 45/58 (77.59%), Query Frame = -2 Query: 95 RYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTXXXXXXXXXXLVYNTSALAQ 268 +YGANVDGYSPIYNE++WS SGDVY GG TGLAIWAVT LVYNTSALAQ Sbjct: 84 KYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNTSALAQ 141
BLAST of GE213432 vs. ExPASy Swiss-Prot
Match: PSBR_SPIOL (Photosystem II 10 kDa polypeptide, chloroplastic OS=Spinacia oleracea GN=PSBR PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.275e-17 Identity = 40/58 (68.97%), Postives = 44/58 (75.86%), Query Frame = -2 Query: 95 RYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTXXXXXXXXXXLVYNTSALAQ 268 +YGANVDGYSPIYNE +W+P+GDVY GG TGL IWAVT LVYNTSALAQ Sbjct: 83 KYGANVDGYSPIYNEEEWAPTGDVYAGGTTGLLIWAVTLAGLLAGGALLVYNTSALAQ 140
BLAST of GE213432 vs. ExPASy Swiss-Prot
Match: PSBR_HORVU (Photosystem II 10 kDa polypeptide, chloroplastic OS=Hordeum vulgare GN=PSBR PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.100e-14 Identity = 37/57 (64.91%), Postives = 41/57 (71.93%), Query Frame = -2 Query: 98 RYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTXXXXXXXXXXLVYNTSALA 268 +YGANVDGYSPIY +WSPSGDVY GG TGL +WAVT LVY+TSALA Sbjct: 81 KYGANVDGYSPIYTPEEWSPSGDVYVGGKTGLFLWAVTLAGILLGGALLVYSTSALA 137 The following BLAST results are available for this feature:
BLAST of GE213432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
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