GE213408

Overview
NameGE213408
Unique NameGE213408
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig269 contig Csv1_Contig269:1..474. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GE213408 vs. ExPASy Swiss-Prot
Match: BLH1_ARATH (BEL1-like homeodomain protein 1 OS=Arabidopsis thaliana GN=BLH1 PE=1 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 6.694e-66
Identity = 126/156 (80.77%), Postives = 133/156 (85.26%), Query Frame = 3
Query:    3 SSFEQAAGIESAKTYTALALKTISKQFRCLKDAITGQIKAANKMLGEEDCVGS--KIEGSRLKFVDHHXXXXXXXXXXGMIQH---NAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKQMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYL 455
            SSFEQAAGI SAK+YT+LALKTIS+QFRCLK+AI GQIKAANK LGEED V    + EGSRLKFVDHH          GMIQH   NAWRPQRGLPER+VSVLRAWLFEHFLHPYPKDSDK MLAKQTGLTRSQVSNWFINARVRLWKPMVEEMY+
Sbjct:  298 SSFEQAAGIGSAKSYTSLALKTISRQFRCLKEAIAGQIKAANKSLGEEDSVSGVGRFEGSRLKFVDHHLRQQRALQQLGMIQHPSNNAWRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYM 453          
BLAST of GE213408 vs. ExPASy Swiss-Prot
Match: BLH7_ARATH (BEL1-like homeodomain protein 7 OS=Arabidopsis thaliana GN=BLH7 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 2.826e-48
Identity = 98/152 (64.47%), Postives = 112/152 (73.68%), Query Frame = 3
Query:    3 SSFEQAAGIESAKTYTALALKTISKQFRCLKDAITGQIKAANKMLGEED--CVGSKIEGSRLKFVDHHXXXXXXXXXXGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKQMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMY 452
            SSF+  AG  +AK YTALAL+TIS+ FRCL+DAI+GQI    K LG E     G  +  SRL+ VD            G++Q + WRPQRGLP+ SV VLRAWLFEHFLHPYPKDSDK MLA+QTGL+R QVSNWFINARVRLWKPMVEEMY
Sbjct:  201 SSFDVIAGCGAAKPYTALALQTISRHFRCLRDAISGQILVIRKSLGGEQDGSDGRGVGISRLRNVDQQVRQQRALQRLGVMQPHTWRPQRGLPDSSVLVLRAWLFEHFLHPYPKDSDKIMLARQTGLSRGQVSNWFINARVRLWKPMVEEMY 352          
BLAST of GE213408 vs. ExPASy Swiss-Prot
Match: BLH6_ARATH (BEL1-like homeodomain protein 6 OS=Arabidopsis thaliana GN=BLH6 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 3.690e-48
Identity = 101/153 (66.01%), Postives = 114/153 (74.51%), Query Frame = 3
Query:    3 SSFEQAAGIESAKTYTALALKTISKQFRCLKDAITGQIKAANKMLGEE-DCVGSKIEG--SRLKFVDHHXXXXXXXXXXGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKQMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMY 452
            SSF+  AG  +AK YTALAL+TIS+ FR L+DAI+GQI    K LGE+ D    K  G  SRLK+VD H          G +Q  AWRPQRGLPE SV +LRAWLFEHFLHPYPKDSDK MLA+QTGL+R QVSNWFINARVRLWKPMVEE+Y
Sbjct:  234 SSFDVIAGYGAAKPYTALALQTISRHFRSLRDAISGQILVLRKCLGEQQDGSDGKRVGIISRLKYVDQHLRQQR-----GFMQPQAWRPQRGLPENSVLILRAWLFEHFLHPYPKDSDKIMLARQTGLSRGQVSNWFINARVRLWKPMVEEIY 381          
BLAST of GE213408 vs. ExPASy Swiss-Prot
Match: BLH4_ARATH (BEL1-like homeodomain protein 4 OS=Arabidopsis thaliana GN=BLH4 PE=2 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 7.695e-46
Identity = 87/156 (55.77%), Postives = 114/156 (73.08%), Query Frame = 3
Query:    3 SSFEQAAGIESAKTYTALALKTISKQFRCLKDAITGQIKAANKMLGEEDCVGS------KIEGSRLKFVDHHXXXXXXXXXXGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKQMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMY 452
            +SF+Q  G  +A  YT LA K +S+ FRCLKDA+  Q+K + ++LG+++  G+      K E  RL+ ++            GM++  AWRPQRGLPERSV++LRAWLFEHFL+PYP D+DK +LA+QTGL+R+QVSNWFINARVRLWKPMVEEMY
Sbjct:  336 NSFDQVMGYGAAVPYTTLAQKAMSRHFRCLKDAVAVQLKRSCELLGDKEAAGAASSGLTKGETPRLRLLEQSLRQQRAFHHMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLNPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEEMY 491          
BLAST of GE213408 vs. ExPASy Swiss-Prot
Match: BLH5_ARATH (BEL1-like homeodomain protein 5 OS=Arabidopsis thaliana GN=BLH5 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.005e-45
Identity = 93/150 (62.00%), Postives = 113/150 (75.33%), Query Frame = 3
Query:    3 SSFEQAAGIESAKTYTALALKTISKQFRCLKDAITGQIKAANKMLGEEDCVGSKIEGSRLKFVDHHXXXXXXXXXXGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKQMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMY 452
            SSFEQAAG+ SA +YT +AL+TISKQFR +KD I+ QIK  NK+LG+++      +  +L  + HH               NAWRPQRGLPE+ VSVLR+WLFEHFLHPYP+D DK MLAKQTGLT+SQVSNWFINARVR+WKP+VEE+Y
Sbjct:  162 SSFEQAAGLGSANSYTHMALQTISKQFRAVKDMISLQIKQINKLLGQKEF---DEQLKKLGKMAHH-------------HSNAWRPQRGLPEKVVSVLRSWLFEHFLHPYPRDLDKVMLAKQTGLTKSQVSNWFINARVRMWKPLVEELY 295          
BLAST of GE213408 vs. ExPASy Swiss-Prot
Match: BLH2_ARATH (BEL1-like homeodomain protein 2 OS=Arabidopsis thaliana GN=BLH2 PE=1 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 2.924e-45
Identity = 90/156 (57.69%), Postives = 113/156 (72.44%), Query Frame = 3
Query:    3 SSFEQAAGIESAKTYTALALKTISKQFRCLKDAITGQIKAANKMLGEEDCVG------SKIEGSRLKFVDHHXXXXXXXXXXGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKQMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMY 452
            +SF+   G  +A  YTALA K +S+ FRCLKDA+  Q+K + ++LG++D  G      +K E  RL+ ++            GM Q  AWRPQRGLPERSV++LRAWLFEHFLHPYP D+DK +LA+QTGL+R+QVSNWFINARVRLWKPMVEEMY
Sbjct:  410 NSFDIVMGHGAALPYTALAQKAMSRHFRCLKDAVAAQLKQSCELLGDKDAAGISSSGLTKGETPRLRLLEQSLRQNRAFHQMGMEQE-AWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEEMY 564          
BLAST of GE213408 vs. ExPASy Swiss-Prot
Match: BEL1_ARATH (Homeobox protein BEL1 homolog OS=Arabidopsis thaliana GN=BEL1 PE=1 SV=2)

HSP 1 Score: 179.489 bits (454), Expect = 6.514e-45
Identity = 85/156 (54.49%), Postives = 111/156 (71.15%), Query Frame = 3
Query:    3 SSFEQAAGIESAKTYTALALKTISKQFRCLKDAITGQIKAANKMLGEED------CVGSKIEGSRLKFVDHHXXXXXXXXXXGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKQMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMY 452
            ++FE A G+  A+ YTALA + +S+ FRCLKD + GQI+A ++ LGE +       + ++ E  RL+ +D             ++  + WRPQRGLPER+V+ LRAWLFEHFLHPYP D DK +LA+QTGL+RSQVSNWFINARVRLWKPM+EEMY
Sbjct:  303 AAFEAAVGLGGAEIYTALASRAMSRHFRCLKDGLVGQIQATSQALGEREEDNRAVSIAARGETPRLRLLDQALRQQKSYRQMTLVDAHPWRPQRGLPERAVTTLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMIEEMY 458          
BLAST of GE213408 vs. ExPASy Swiss-Prot
Match: BLH3_ARATH (BEL1-like homeodomain protein 3 OS=Arabidopsis thaliana GN=BLH3 PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 2.096e-43
Identity = 86/151 (56.95%), Postives = 108/151 (71.52%), Query Frame = 3
Query:    3 SSFEQAAGIESAKTYTALALKTISKQFRCLKDAITGQIKAANKMLGEEDCVGSKIEG-SRLKFVDHHXXXXXXXXXXGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKQMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMY 452
            SSFE   G+ +AK YT++AL  IS+ FRCL+DAI  QI+     LGE +    + E   RL+++D              +   AWRPQRGLPE SVS+LRAWLFEHFLHPYPK+S+K ML+KQTGL+++QV+NWFINARVRLWKPM+EEMY
Sbjct:  263 SSFEMVTGLGAAKPYTSVALNRISRHFRCLRDAIKEQIQVIRGKLGERETSDEQGERIPRLRYLDQRLRQQRALHQQLGMVRPAWRPQRGLPENSVSILRAWLFEHFLHPYPKESEKIMLSKQTGLSKNQVANWFINARVRLWKPMIEEMY 413          
BLAST of GE213408 vs. ExPASy Swiss-Prot
Match: BLH10_ARATH (BEL1-like homeodomain protein 10 OS=Arabidopsis thaliana GN=BLH10 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 4.668e-43
Identity = 90/156 (57.69%), Postives = 111/156 (71.15%), Query Frame = 3
Query:    3 SSFEQAAGIESAKTYTALALKTISKQFRCLKDAITGQIKAANKMLGE------EDCVGSKIEGSRLKFVDHHXXXXXXXXXXGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKQMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMY 452
            SSFE  AG+ SAK YT++AL  IS+ FR L+DAI  QI+   + LGE      ++  G +I   RL+++D              +   AWRPQRGLPE SVSVLRAWLFEHFLHPYPK+S+K MLAKQTGL+++QV+NWFINARVRLWKPM+EEMY
Sbjct:  265 SSFEIVAGLGSAKPYTSVALNRISRHFRALRDAIKEQIQIVREKLGEKGGESLDEQQGERIP--RLRYLDQRLRQQRALHQQLGMVRPAWRPQRGLPENSVSVLRAWLFEHFLHPYPKESEKIMLAKQTGLSKNQVANWFINARVRLWKPMIEEMY 418          
BLAST of GE213408 vs. ExPASy Swiss-Prot
Match: BLH9_ARATH (BEL1-like homeodomain protein 9 OS=Arabidopsis thaliana GN=BLH9 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 6.309e-40
Identity = 86/159 (54.09%), Postives = 111/159 (69.81%), Query Frame = 3
Query:    6 SFEQAAGIESAKTYTALALKTISKQFRCLKDAITGQIKAA--NKMLGEEDC---VGSKIEGSRLKF--VDHHXXXXXXXXXXGMIQHNA--WRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKQMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYL 455
            SFE  AG+  A  Y  LALK +SK F+CLK+AIT Q++ +  NK+  ++ C   + S+ +   L+F   D            G   H+A  WRP RGLPER+V+VLRAWLF+HFLHPYP D+DK MLAKQTGL+R+QVSNWFINARVR+WKPMVEE+++
Sbjct:  258 SFECVAGLGHAAPYANLALKALSKHFKCLKNAITDQLQFSHNNKIQQQQQCGHPMNSENKTDSLRFGGSDSSRGLCSAGQRHGFPDHHAPVWRPHRGLPERAVTVLRAWLFDHFLHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVRVWKPMVEEIHM 416          
The following BLAST results are available for this feature:
BLAST of GE213408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
BLH1_ARATH6.694e-6680.77BEL1-like homeodomain protein 1 OS=Arabidopsis tha... [more]
BLH7_ARATH2.826e-4864.47BEL1-like homeodomain protein 7 OS=Arabidopsis tha... [more]
BLH6_ARATH3.690e-4866.01BEL1-like homeodomain protein 6 OS=Arabidopsis tha... [more]
BLH4_ARATH7.695e-4655.77BEL1-like homeodomain protein 4 OS=Arabidopsis tha... [more]
BLH5_ARATH1.005e-4562.00BEL1-like homeodomain protein 5 OS=Arabidopsis tha... [more]
BLH2_ARATH2.924e-4557.69BEL1-like homeodomain protein 2 OS=Arabidopsis tha... [more]
BEL1_ARATH6.514e-4554.49Homeobox protein BEL1 homolog OS=Arabidopsis thali... [more]
BLH3_ARATH2.096e-4356.95BEL1-like homeodomain protein 3 OS=Arabidopsis tha... [more]
BLH10_ARATH4.668e-4357.69BEL1-like homeodomain protein 10 OS=Arabidopsis th... [more]
BLH9_ARATH6.309e-4054.09BEL1-like homeodomain protein 9 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank description278 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.