GE213404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of GE213404 vs. ExPASy Swiss-Prot
Match: MDHC_MAIZE (Malate dehydrogenase, cytoplasmic OS=Zea mays PE=2 SV=2) HSP 1 Score: 309.301 bits (791), Expect = 7.136e-84 Identity = 155/167 (92.81%), Postives = 159/167 (95.21%), Query Frame = -2 Query: 24 RGRGRGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQAFALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQY 524 RG G DQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTD VEACTGVN+AVMVGGFPRKEGMERKDVMSKNVSIYK+QA ALE HAAPNCKVLVVANPANTNALILKEFAPSIP KN+TCLTRLDHNRALGQISE+LNVQVSDVKNVIIWGNHSSSQY Sbjct: 27 RGVMLGADQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDVVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEAHAAPNCKVLVVANPANTNALILKEFAPSIPEKNVTCLTRLDHNRALGQISERLNVQVSDVKNVIIWGNHSSSQY 193
BLAST of GE213404 vs. ExPASy Swiss-Prot
Match: MDHC_MESCR (Malate dehydrogenase, cytoplasmic OS=Mesembryanthemum crystallinum GN=MDH PE=2 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 6.041e-83 Identity = 154/167 (92.22%), Postives = 159/167 (95.21%), Query Frame = -2 Query: 24 RGRGRGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQAFALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQY 524 RG G +QPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDA EAC GVN+AVMVGGFPRKEGMERKDVMSKNVSIYKAQA ALEQHAAPNCKVLVVANPANTNALILKEFAPSIP KNI+CLTRLDHNRALGQISE+LNVQVSDVKNVIIWGNHSS+QY Sbjct: 27 RGIMLGANQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAAEACKGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQISERLNVQVSDVKNVIIWGNHSSTQY 193
BLAST of GE213404 vs. ExPASy Swiss-Prot
Match: MDHC1_ARATH (Malate dehydrogenase, cytoplasmic 1 OS=Arabidopsis thaliana GN=At1g04410 PE=1 SV=2) HSP 1 Score: 304.294 bits (778), Expect = 2.296e-82 Identity = 152/167 (91.02%), Postives = 159/167 (95.21%), Query Frame = -2 Query: 24 RGRGRGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQAFALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQY 524 RG G DQPVILHMLDIPPAAEALNGVKMEL+DAAFPLLKGVVATTDAVE CTGVN+AVMVGGFPRKEGMERKDVMSKNVSIYK+QA ALE+HAAPNCKVLVVANPANTNALILKEFAPSIP KNI+CLTRLDHNRALGQISE+L+V VSDVKNVIIWGNHSSSQY Sbjct: 27 RGIMLGADQPVILHMLDIPPAAEALNGVKMELIDAAFPLLKGVVATTDAVEGCTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQAAALEKHAAPNCKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQISERLSVPVSDVKNVIIWGNHSSSQY 193
BLAST of GE213404 vs. ExPASy Swiss-Prot
Match: MDHC_ORYSJ (Malate dehydrogenase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os10g0478200 PE=1 SV=3) HSP 1 Score: 302.753 bits (774), Expect = 6.680e-82 Identity = 150/167 (89.82%), Postives = 157/167 (94.01%), Query Frame = -2 Query: 24 RGRGRGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQAFALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQY 524 RG G DQPVILHMLDIPPA E+LNG+KMELVDAAFPLLKG+VATTD VEACTGVN+AVMVGGFPRKEGMERKDVMSKNVSIYK+QA ALE HAAPNCKVLVVANPANTNALILKEFAPSIP KNITCLTRLDHNRALGQISEKLNVQV+DVKN IIWGNHSS+QY Sbjct: 27 RGVMLGADQPVILHMLDIPPATESLNGLKMELVDAAFPLLKGIVATTDVVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEAHAAPNCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQISEKLNVQVTDVKNAIIWGNHSSTQY 193
BLAST of GE213404 vs. ExPASy Swiss-Prot
Match: MDHC2_ARATH (Malate dehydrogenase, cytoplasmic 2 OS=Arabidopsis thaliana GN=At5g43330 PE=2 SV=1) HSP 1 Score: 301.982 bits (772), Expect = 1.139e-81 Identity = 152/167 (91.02%), Postives = 159/167 (95.21%), Query Frame = -2 Query: 24 RGRGRGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQAFALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQY 524 RG G DQPVILHMLDIP AAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVN+AVMVGGFPRKEGMERKDVMSKNVSIYK+QA ALE+HAAPNCKVLVVANPANTNALILKEFAPSIP KNITCLTRLDHNRALGQ+SE+L+V VSDVKNVIIWGNHSS+QY Sbjct: 27 RGIMLGADQPVILHMLDIPFAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAAPNCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQVSERLSVPVSDVKNVIIWGNHSSTQY 193
BLAST of GE213404 vs. ExPASy Swiss-Prot
Match: MDHC_BETVU (Malate dehydrogenase, cytoplasmic OS=Beta vulgaris GN=NR1 PE=1 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 3.315e-81 Identity = 151/167 (90.42%), Postives = 156/167 (93.41%), Query Frame = -2 Query: 24 RGRGRGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQAFALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQY 524 RG G +QPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTD EAC GVN+AVMVGGFPRKEGMERKDVM KNVSIYK+QA ALEQ+AAPNCKVLVVANPANTNALILKEFAPSIP KNITCLTRLDHNRALGQISE+LN QVSDVKNVIIWGNHSSSQY Sbjct: 27 RGVMLGANQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDVAEACKGVNVAVMVGGFPRKEGMERKDVMPKNVSIYKSQASALEQYAAPNCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQISERLNAQVSDVKNVIIWGNHSSSQY 193
BLAST of GE213404 vs. ExPASy Swiss-Prot
Match: MDHC_MEDSA (Malate dehydrogenase, cytoplasmic OS=Medicago sativa GN=CMDH PE=2 SV=1) HSP 1 Score: 299.286 bits (765), Expect = 7.385e-81 Identity = 151/167 (90.42%), Postives = 158/167 (94.61%), Query Frame = -2 Query: 24 RGRGRGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQAFALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQY 524 RG G DQPVILHMLDI PAAE+LNGVKMELVDAAFPLLKGVVATTD VEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYK+QA ALE+HAA NCKVLVVANPANTNALILKEFAPSIP +NI+CLTRLDHNRALGQISE+LNVQVSDVKNVIIWGNHSS+QY Sbjct: 27 RGVMLGPDQPVILHMLDIAPAAESLNGVKMELVDAAFPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAAANCKVLVVANPANTNALILKEFAPSIPERNISCLTRLDHNRALGQISERLNVQVSDVKNVIIWGNHSSTQY 193
BLAST of GE213404 vs. ExPASy Swiss-Prot
Match: MDHC_XENTR (Malate dehydrogenase, cytoplasmic OS=Xenopus tropicalis GN=mdh1 PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 3.132e-47 Identity = 94/162 (58.02%), Postives = 117/162 (72.22%), Query Frame = -2 Query: 24 GTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQAFALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQY 509 G DQP+IL +LDI P L GV MEL D A PLLK V+AT A +++A++VG PR+EGMERKD++ NV I+K+Q AL +++ + KV+VV NPANTN L + APSIP +N +CLTRLDHNRA GQI+ KLNV DVKNVIIWGNHSS+QY Sbjct: 31 GKDQPLILVLLDITPMMTVLEGVVMELQDCALPLLKEVIATDKEDVAFKDLDVAILVGSMPRREGMERKDLLKANVKIFKSQGAALNKYSKKSVKVIVVGNPANTNCLTAMKSAPSIPKENFSCLTRLDHNRAKGQIALKLNVASDDVKNVIIWGNHSSTQY 192
BLAST of GE213404 vs. ExPASy Swiss-Prot
Match: MDHC_RAT (Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus GN=Mdh1 PE=1 SV=3) HSP 1 Score: 187.578 bits (475), Expect = 3.132e-47 Identity = 94/162 (58.02%), Postives = 117/162 (72.22%), Query Frame = -2 Query: 24 GTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQAFALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQY 509 G DQP+IL +LDI P L+GV MEL D A PLL+ V+AT A +++AV+VG PR+EGMERKD++ NV I+K+Q ALE++A + KV+VV NPANTN L + APSIP +N +CLTRLDHNRA QI+ KL V DVKNVIIWGNHSS+QY Sbjct: 31 GKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLQDVIATDKEEVAFKDLDVAVLVGSMPRREGMERKDLLKANVKIFKSQGAALEKYAKKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKSQIALKLGVTADDVKNVIIWGNHSSTQY 192
BLAST of GE213404 vs. ExPASy Swiss-Prot
Match: MDHC_HUMAN (Malate dehydrogenase, cytoplasmic OS=Homo sapiens GN=MDH1 PE=1 SV=4) HSP 1 Score: 187.578 bits (475), Expect = 3.132e-47 Identity = 93/162 (57.41%), Postives = 118/162 (72.84%), Query Frame = -2 Query: 24 GTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQAFALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQY 509 G DQP+IL +LDI P L+GV MEL D A PLLK V+AT A +++A++VG PR+EGMERKD++ NV I+K+Q AL+++A + KV+VV NPANTN L + APSIP +N +CLTRLDHNRA QI+ KL V +DVKNVIIWGNHSS+QY Sbjct: 31 GKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEDVAFKDLDVAILVGSMPRREGMERKDLLKANVKIFKSQGAALDKYAKKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTANDVKNVIIWGNHSSTQY 192 The following BLAST results are available for this feature:
BLAST of GE213404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 187
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