GE213370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of GE213370 vs. ExPASy Swiss-Prot
Match: PSB1_PETHY (Proteasome subunit beta type-1 OS=Petunia hybrida GN=PBF1 PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 6.730e-50 Identity = 93/106 (87.74%), Postives = 98/106 (92.45%), Query Frame = -1 Query: 13 MTKQHPAWSPYDNNGGTCVAIAGADYCVIAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYLGR 330 MTKQ WSPYDNNGGTCVA+AGADYCVIAADTRMSTGY+ILTRDYSKI KLADKCVMASSGFQADV+ALQK+LA+RHLIYQHQHNKQMSCP M QLLSNTLY R Sbjct: 1 MTKQQANWSPYDNNGGTCVAVAGADYCVIAADTRMSTGYNILTRDYSKIIKLADKCVMASSGFQADVRALQKVLASRHLIYQHQHNKQMSCPAMGQLLSNTLYYKR 106
BLAST of GE213370 vs. ExPASy Swiss-Prot
Match: PSB1_ARATH (Proteasome subunit beta type-1 OS=Arabidopsis thaliana GN=PBF1 PE=1 SV=2) HSP 1 Score: 191.045 bits (484), Expect = 1.658e-48 Identity = 91/106 (85.85%), Postives = 98/106 (92.45%), Query Frame = -1 Query: 13 MTKQHPAWSPYDNNGGTCVAIAGADYCVIAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYLGR 330 MTKQH WSPYDNNGGTCVAIAG+DYCVIAADTRMSTGYSIL+RDYSKI KLAD+ V++SSGFQADVKALQK+L +RHLIYQHQHNKQMSCP MAQLLSNTLY R Sbjct: 1 MTKQHANWSPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVKALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKR 106
BLAST of GE213370 vs. ExPASy Swiss-Prot
Match: PSB1_ORYSJ (Proteasome subunit beta type-1 OS=Oryza sativa subsp. japonica GN=PBF1 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 3.348e-41 Identity = 77/96 (80.21%), Postives = 87/96 (90.62%), Query Frame = -1 Query: 13 YDNNGGTCVAIAGADYCVIAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYLGR 300 Y+NNGGTCVAIAGADYCV+AADTR+S GY+ILTRD+SKIC+LADKC +ASSGFQ D+KAL K LAAR L+YQHQHNK+MSCP MAQLLSNTLY R Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSGFQGDIKALHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKR 104
BLAST of GE213370 vs. ExPASy Swiss-Prot
Match: PSB1_DICDI (Proteasome subunit beta type-1 OS=Dictyostelium discoideum GN=psmB1 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 8.284e-24 Identity = 57/103 (55.34%), Postives = 70/103 (67.96%), Query Frame = -1 Query: 13 HPAWSPYDNNGGTCVAIAGADYCVIAADTRMSTG-YSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYLGR 318 H + Y +NGGT +A+AG DYCVIA DTRMS G Y I TR Y+KI +L KCV+A+SG QAD ALQK L + ++ +H K MS P +AQ LSNTLY R Sbjct: 20 HGRFEAYVDNGGTVLAVAGKDYCVIAGDTRMSDGGYGIQTRKYTKIFQLTKKCVLATSGMQADTIALQKRLKSMLESFEKEHGKPMSTPAIAQFLSNTLYYKR 122
BLAST of GE213370 vs. ExPASy Swiss-Prot
Match: PSB1_RAT (Proteasome subunit beta type-1 OS=Rattus norvegicus GN=Psmb1 PE=1 SV=3) HSP 1 Score: 95.5153 bits (236), Expect = 9.479e-20 Identity = 48/99 (48.48%), Postives = 65/99 (65.66%), Query Frame = -1 Query: 13 WSPYDNNGGTCVAIAGADYCVIAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYLGR 309 +SPY NGGT +AIAG D+ ++A+DTR+S G+SI TRD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ +A +LS LY R Sbjct: 29 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRR 127
BLAST of GE213370 vs. ExPASy Swiss-Prot
Match: PSB1_MOUSE (Proteasome subunit beta type-1 OS=Mus musculus GN=Psmb1 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 9.479e-20 Identity = 48/99 (48.48%), Postives = 65/99 (65.66%), Query Frame = -1 Query: 13 WSPYDNNGGTCVAIAGADYCVIAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYLGR 309 +SPY NGGT +AIAG D+ ++A+DTR+S G+SI TRD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ +A +LS LY R Sbjct: 29 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRR 127
BLAST of GE213370 vs. ExPASy Swiss-Prot
Match: PSB1_HUMAN (Proteasome subunit beta type-1 OS=Homo sapiens GN=PSMB1 PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 9.479e-20 Identity = 48/99 (48.48%), Postives = 65/99 (65.66%), Query Frame = -1 Query: 13 WSPYDNNGGTCVAIAGADYCVIAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYLGR 309 +SPY NGGT +AIAG D+ ++A+DTR+S G+SI TRD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ +A +LS LY R Sbjct: 30 FSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRR 128
BLAST of GE213370 vs. ExPASy Swiss-Prot
Match: PSB1_BOVIN (Proteasome subunit beta type-1 OS=Bos taurus GN=PSMB1 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 9.479e-20 Identity = 48/99 (48.48%), Postives = 65/99 (65.66%), Query Frame = -1 Query: 13 WSPYDNNGGTCVAIAGADYCVIAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLYLGR 309 +SPY NGGT +AIAG D+ ++A+DTR+S G+SI TRD K KL DK V+ SGF D L K++ AR +Y+H +NK M+ +A +LS LY R Sbjct: 30 FSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRR 128
BLAST of GE213370 vs. ExPASy Swiss-Prot
Match: PSB1_DROME (Proteasome subunit beta type-1 OS=Drosophila melanogaster GN=Pros26 PE=1 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 2.758e-19 Identity = 46/100 (46.00%), Postives = 69/100 (69.00%), Query Frame = -1 Query: 22 QHPAWSPYDNNGGTCVAIAGADYCVIAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLY 321 +HP +SPY++NGG+ VAIAG D+ VIAADTR+S+GY+I +R SK+ KL+ + V+ S+G AD +L + R Y+H H + M+ +AQ+LS +Y Sbjct: 18 KHPDFSPYESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLTGSIKVRMQSYEHTHLRTMTTEAVAQMLSIAMY 117
BLAST of GE213370 vs. ExPASy Swiss-Prot
Match: PSB1B_CARAU (Proteasome subunit beta type-1-B OS=Carassius auratus GN=psmb1-B PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 8.024e-19 Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = -1 Query: 22 WSPYDNNGGTCVAIAGADYCVIAADTRMSTGYSILTRDYSKICKLADKCVMASSGFQADVKALQKLLAARHLIYQHQHNKQMSCPGMAQLLSNTLY 309 +SPY NGGT +A+AG D+ ++A+DTR+S GYSI +RD K KL D V+ SGF D L K++ AR +Y+H +NK M+ +A +LS LY Sbjct: 26 FSPYAFNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILY 121 The following BLAST results are available for this feature:
BLAST of GE213370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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