GE213362

Overview
NameGE213362
Unique NameGE213362
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1908 contig Csv1_Contig1908:989..1426. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GE213362 vs. ExPASy Swiss-Prot
Match: ADT1_ARATH (ADP,ATP carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=ANT1 PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 1.265e-19
Identity = 50/65 (76.92%), Postives = 52/65 (80.00%), Query Frame = -3
Query:  243 SSGRPGRYKSSLDAFSQILKNEGAKSLFKGAGANILRXXXXXXXXXGYDKLQLIVFGKKYGSGGA 437
            +SG   +YKSSLDAF QILKNEGAKSLFKGAGANILR         GYDKLQLIVFGKKYGSGGA
Sbjct:  317 TSGEAVKYKSSLDAFKQILKNEGAKSLFKGAGANILRAVAGAGVLSGYDKLQLIVFGKKYGSGGA 381          
BLAST of GE213362 vs. ExPASy Swiss-Prot
Match: ADT1_GOSHI (ADP,ATP carrier protein 1, mitochondrial OS=Gossypium hirsutum GN=ANT1 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.653e-19
Identity = 49/65 (75.38%), Postives = 53/65 (81.54%), Query Frame = -3
Query:  243 SSGRPGRYKSSLDAFSQILKNEGAKSLFKGAGANILRXXXXXXXXXGYDKLQLIVFGKKYGSGGA 437
            +SG+  +YKSSLDAFSQILKNEG KSLFKGAG+NILR         GYDKLQLIVFGKKYGSGGA
Sbjct:  322 TSGKAVKYKSSLDAFSQILKNEGGKSLFKGAGSNILRAIAGAGVLAGYDKLQLIVFGKKYGSGGA 386          
BLAST of GE213362 vs. ExPASy Swiss-Prot
Match: ADT2_ARATH (ADP,ATP carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=ANT2 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 1.399e-18
Identity = 48/65 (73.85%), Postives = 51/65 (78.46%), Query Frame = -3
Query:  243 SSGRPGRYKSSLDAFSQILKNEGAKSLFKGAGANILRXXXXXXXXXGYDKLQLIVFGKKYGSGGA 437
            +SG   +YKSS DAFSQI+K EGAKSLFKGAGANILR         GYDKLQLIVFGKKYGSGGA
Sbjct:  321 TSGEAVKYKSSFDAFSQIVKKEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLIVFGKKYGSGGA 385          
BLAST of GE213362 vs. ExPASy Swiss-Prot
Match: ADT_ORYSJ (ADP,ATP carrier protein, mitochondrial OS=Oryza sativa subsp. japonica GN=Os02g0718900 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.386e-18
Identity = 46/65 (70.77%), Postives = 52/65 (80.00%), Query Frame = -3
Query:  243 SSGRPGRYKSSLDAFSQILKNEGAKSLFKGAGANILRXXXXXXXXXGYDKLQLIVFGKKYGSGGA 437
            +SG   +YKSS+DAFSQILKNEGAKSLFKGAGANILR         GYD+LQ++ FGKKYGSGGA
Sbjct:  318 TSGEAVKYKSSMDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLSGYDQLQILFFGKKYGSGGA 382          
BLAST of GE213362 vs. ExPASy Swiss-Prot
Match: ADT2_SOLTU (ADP,ATP carrier protein, mitochondrial (Fragment) OS=Solanum tuberosum GN=ANT1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 9.068e-18
Identity = 45/64 (70.31%), Postives = 50/64 (78.12%), Query Frame = -3
Query:  246 SSGRPGRYKSSLDAFSQILKNEGAKSLFKGAGANILRXXXXXXXXXGYDKLQLIVFGKKYGSGG 437
            +SG   +YKSS DAF+QILKNEG KSLFKGAGAN+LR         GYDKLQ+IVFGKKYGSGG
Sbjct:  322 TSGEAVKYKSSFDAFNQILKNEGPKSLFKGAGANVLRAVAGAGVLAGYDKLQVIVFGKKYGSGG 385          
BLAST of GE213362 vs. ExPASy Swiss-Prot
Match: ADT1_WHEAT (ADP,ATP carrier protein 1, mitochondrial OS=Triticum aestivum GN=ANT-G1 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.020e-17
Identity = 45/65 (69.23%), Postives = 50/65 (76.92%), Query Frame = -3
Query:  243 SSGRPGRYKSSLDAFSQILKNEGAKSLFKGAGANILRXXXXXXXXXGYDKLQLIVFGKKYGSGGA 437
            +SG   +YKSSLDAF QILK EGAKSLFKGAGANILR         GYD+LQ++ FGKKYGSGGA
Sbjct:  267 TSGEAVKYKSSLDAFQQILKKEGAKSLFKGAGANILRAIAGAGVLSGYDQLQILFFGKKYGSGGA 331          
BLAST of GE213362 vs. ExPASy Swiss-Prot
Match: ADT1_SOLTU (ADP,ATP carrier protein, mitochondrial OS=Solanum tuberosum GN=ANT PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.020e-17
Identity = 45/65 (69.23%), Postives = 51/65 (78.46%), Query Frame = -3
Query:  243 SSGRPGRYKSSLDAFSQILKNEGAKSLFKGAGANILRXXXXXXXXXGYDKLQLIVFGKKYGSGGA 437
            +SG   +YKSSLDAFSQI+KNEG KSLFKGAGANILR         GYDKLQ++V GKK+GSGGA
Sbjct:  322 TSGEAVKYKSSLDAFSQIVKNEGPKSLFKGAGANILRAVAGAGVLAGYDKLQVLVLGKKFGSGGA 386          
BLAST of GE213362 vs. ExPASy Swiss-Prot
Match: ADT2_MAIZE (ADP,ATP carrier protein 2, mitochondrial OS=Zea mays GN=ANT2 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 7.677e-17
Identity = 44/65 (67.69%), Postives = 49/65 (75.38%), Query Frame = -3
Query:  243 SSGRPGRYKSSLDAFSQILKNEGAKSLFKGAGANILRXXXXXXXXXGYDKLQLIVFGKKYGSGGA 437
            +SG   +YKSSLDAF QILK EG KSLFKGAGANILR         GYD+LQ++ FGKKYGSGGA
Sbjct:  323 TSGEAVKYKSSLDAFQQILKKEGPKSLFKGAGANILRAIAGAGVLSGYDQLQILFFGKKYGSGGA 387          
BLAST of GE213362 vs. ExPASy Swiss-Prot
Match: ADT1_MAIZE (ADP,ATP carrier protein 1, mitochondrial OS=Zea mays GN=ANT1 PE=2 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 7.677e-17
Identity = 44/65 (67.69%), Postives = 49/65 (75.38%), Query Frame = -3
Query:  243 SSGRPGRYKSSLDAFSQILKNEGAKSLFKGAGANILRXXXXXXXXXGYDKLQLIVFGKKYGSGGA 437
            +SG   +YKSSLDAF QILK EG KSLFKGAGANILR         GYD+LQ++ FGKKYGSGGA
Sbjct:  323 TSGEAVKYKSSLDAFQQILKKEGPKSLFKGAGANILRAIAGAGVLSGYDQLQILFFGKKYGSGGA 387          
BLAST of GE213362 vs. ExPASy Swiss-Prot
Match: ADT2_WHEAT (ADP,ATP carrier protein 2, mitochondrial OS=Triticum aestivum GN=ANT-G2 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 6.499e-16
Identity = 43/65 (66.15%), Postives = 48/65 (73.85%), Query Frame = -3
Query:  243 SSGRPGRYKSSLDAFSQILKNEGAKSLFKGAGANILRXXXXXXXXXGYDKLQLIVFGKKYGSGGA 437
            +SG   +YKSSLDAF QI   EGAKSLFKGAGANILR         GYD+LQ++ FGKKYGSGGA
Sbjct:  267 TSGEAVKYKSSLDAFQQIPAKEGAKSLFKGAGANILRAIAGAGVLSGYDQLQILFFGKKYGSGGA 331          
The following BLAST results are available for this feature:
BLAST of GE213362 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
ADT1_ARATH1.265e-1976.92ADP,ATP carrier protein 1, mitochondrial OS=Arabid... [more]
ADT1_GOSHI1.653e-1975.38ADP,ATP carrier protein 1, mitochondrial OS=Gossyp... [more]
ADT2_ARATH1.399e-1873.85ADP,ATP carrier protein 2, mitochondrial OS=Arabid... [more]
ADT_ORYSJ2.386e-1870.77ADP,ATP carrier protein, mitochondrial OS=Oryza sa... [more]
ADT2_SOLTU9.068e-1870.31ADP,ATP carrier protein, mitochondrial (Fragment) ... [more]
ADT1_WHEAT2.020e-1769.23ADP,ATP carrier protein 1, mitochondrial OS=Tritic... [more]
ADT1_SOLTU2.020e-1769.23ADP,ATP carrier protein, mitochondrial OS=Solanum ... [more]
ADT2_MAIZE7.677e-1767.69ADP,ATP carrier protein 2, mitochondrial OS=Zea ma... [more]
ADT1_MAIZE7.677e-1767.69ADP,ATP carrier protein 1, mitochondrial OS=Zea ma... [more]
ADT2_WHEAT6.499e-1666.15ADP,ATP carrier protein 2, mitochondrial OS=Tritic... [more]

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Properties
Property NameValue
Genbank description229 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.