GE213360
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of GE213360 vs. ExPASy Swiss-Prot
Match: TAF10_MOUSE (Transcription initiation factor TFIID subunit 10 OS=Mus musculus GN=Taf10 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.980e-19 Identity = 48/104 (46.15%), Postives = 66/104 (63.46%), Query Frame = -2 Query: 238 LTEFLSSLMGYTPTIPDELVEHYLAKSGFQCPDVRLIRLVAVATQKFVAEVATDALQQCKARQAAVVXXXXXXXXXXXRLILTMEDLSKALREYGVNVKHQEYF 549 L +FL L YTPTIPD + +YL ++GF+ D R+IRL+++A QKF++++A DALQ CK + A + LTMEDL+ AL EYG+NVK YF Sbjct: 116 LVDFLMQLEDYTPTIPDAVTGYYLNRAGFEASDPRIIRLISLAAQKFISDIANDALQHCKMKGTA--SGSSRSKSKDRKYTLTMEDLTPALSEYGINVKKPHYF 217
BLAST of GE213360 vs. ExPASy Swiss-Prot
Match: TAF10_HUMAN (Transcription initiation factor TFIID subunit 10 OS=Homo sapiens GN=TAF10 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.980e-19 Identity = 48/104 (46.15%), Postives = 66/104 (63.46%), Query Frame = -2 Query: 238 LTEFLSSLMGYTPTIPDELVEHYLAKSGFQCPDVRLIRLVAVATQKFVAEVATDALQQCKARQAAVVXXXXXXXXXXXRLILTMEDLSKALREYGVNVKHQEYF 549 L +FL L YTPTIPD + +YL ++GF+ D R+IRL+++A QKF++++A DALQ CK + A + LTMEDL+ AL EYG+NVK YF Sbjct: 116 LVDFLMQLEDYTPTIPDAVTGYYLNRAGFEASDPRIIRLISLAAQKFISDIANDALQHCKMKGTA--SGSSRSKSKDRKYTLTMEDLTPALSEYGINVKKPHYF 217
BLAST of GE213360 vs. ExPASy Swiss-Prot
Match: TAFAB_DROME (Transcription initiation factor TFIID subunit 10b OS=Drosophila melanogaster GN=Taf10b PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.808e-16 Identity = 43/104 (41.35%), Postives = 62/104 (59.62%), Query Frame = -2 Query: 241 LTEFLSSLMGYTPTIPDELVEHYLAKSGFQCPDVRLIRLVAVATQKFVAEVATDALQQCKAR-QAAVVXXXXXXXXXXXRLILTMEDLSKALREYGVNVKHQEY 549 L++F+S L YTP IPD + HYL GFQ D R++RL+++A QK+++++ DALQ KAR + LTMEDL AL +YG+NV+ +Y Sbjct: 41 LSDFMSQLEDYTPLIPDAVTSHYLNMGGFQSDDKRIVRLISLAAQKYMSDIIDDALQHSKARTHMQTTNTPGGSKAKDRKFTLTMEDLQPALADYGINVRKVDY 144
BLAST of GE213360 vs. ExPASy Swiss-Prot
Match: TAF10_SCHPO (Transcription initiation factor TFIID subunit 10 OS=Schizosaccharomyces pombe GN=taf10 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.770e-14 Identity = 44/125 (35.20%), Postives = 66/125 (52.80%), Query Frame = -2 Query: 238 DAALTEFLSSLMGYTPTIPDELVEHYLAKSGFQCPDVRLIRLVAVATQKFVAEVATDALQQCKARQ------------------AAVVXXXXXXXXXXXRLILTMEDLSKALREYGVNVKHQEYF 558 D L FL+ + Y+P IPD L+++YL+ SGF+C D RL +L+ + QKF+++VA DA Q K R A + +LT++DLS AL EYG+N+K ++F Sbjct: 90 DKTLENFLAQMDDYSPLIPDVLLDYYLSLSGFKCVDPRLKKLLGLTAQKFISDVAQDAYQYSKIRTGSSNASSTTFGAQNFGAGGASGIGSSGRRGDRGKTVLTVDDLSAALNEYGINLKRPDFF 214
BLAST of GE213360 vs. ExPASy Swiss-Prot
Match: TAF10_DROME (Transcription initiation factor TFIID subunit 10 OS=Drosophila melanogaster GN=Taf10 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.097e-13 Identity = 39/114 (34.21%), Postives = 63/114 (55.26%), Query Frame = -2 Query: 238 DDAALTEFLSSLMGYTPTIPDELVEHYLAKSGFQCPDVRLIRLVAVATQKFVAEVATDALQQCKARQAAV------VXXXXXXXXXXXRLILTMEDLSKALREYGVNVKHQEYF 561 +++ + E + L Y+PTIPD L H L +GF D +++RLV+V+ QKF++++A DALQ CK R + + L MEDL AL ++G+ ++ +YF Sbjct: 53 EESEMDELIKQLEDYSPTIPDALTMHILKTAGFCTVDPKIVRLVSVSAQKFISDIANDALQHCKTRTTNIQHSSGHSSSKDKKNPKDRKYTLAMEDLVPALADHGITMRKPQYF 166
BLAST of GE213360 vs. ExPASy Swiss-Prot
Match: TAF10_YEAST (Transcription initiation factor TFIID subunit 10 OS=Saccharomyces cerevisiae GN=TAF10 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.861e-12 Identity = 41/135 (30.37%), Postives = 65/135 (48.15%), Query Frame = -2 Query: 238 DAALTEFLSSLMGYTPTIPDELVEHYLAKSGFQCPDVRLIRLVAVATQKFVAEVATDALQQCKARQAAVVXXXXXXXXXXXRL----------------------------ILTMEDLSKALREYGVNVKHQEYF 558 D L E L + P IPD ++++YL K+GF DVR+ RL+A+ATQKFV+++A DA + + R + V +L +LT+ DLS A+ EYG+N+ +++ Sbjct: 71 DKTLEEILEMMDSTPPIIPDAVIDYYLTKNGFNVADVRVKRLLALATQKFVSDIAKDAYEYSRIRSSVAVSNANNSQARARQLLQGQQQPGVQQISQQQHQQNEKTTASKVVLTVNDLSSAVAEYGLNIGRPDFY 205 The following BLAST results are available for this feature:
BLAST of GE213360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
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