GE213314
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GE213314 vs. ExPASy Swiss-Prot
Match: CSF2_BOVIN (Granulocyte-macrophage colony-stimulating factor OS=Bos taurus GN=CSF2 PE=2 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 2.347e-67 Identity = 127/143 (88.81%), Postives = 127/143 (88.81%), Query Frame = -3 Query: 13 MWLQNLLLLGTVVCSFSXXXXXXXXXXXPWQHVDAIKEALSLQNHSSDTDAVMNDTEVVSEKFDSQEPTCLQTCLKLYKNGLQGSLTSLMGSLTMMATQYEKHCPPTPETSCGTQFISFKNFKEDLKEFLFIISFD*WEPAQK 441 MWLQNLLLLGTVVCSFS PWQHVDAIKEALSL NHSSDTDAVMNDTEVVSEKFDSQEPTCLQT LKLYKNGLQGSLTSLMGSLTMMAT YEKHCPPTPETSCGTQFISFKNFKEDLKEFLFII FD WEPAQK Sbjct: 1 MWLQNLLLLGTVVCSFSAPTRPPNTATRPWQHVDAIKEALSLLNHSSDTDAVMNDTEVVSEKFDSQEPTCLQTRLKLYKNGLQGSLTSLMGSLTMMATHYEKHCPPTPETSCGTQFISFKNFKEDLKEFLFIIPFDCWEPAQK 143
BLAST of GE213314 vs. ExPASy Swiss-Prot
Match: CSF2_CEREL (Granulocyte-macrophage colony-stimulating factor OS=Cervus elaphus GN=CSF2 PE=2 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 3.179e-56 Identity = 112/144 (77.78%), Postives = 119/144 (82.64%), Query Frame = -3 Query: 13 MWLQNLLLLGTVVCSFSXXXXXXXXXXXPWQHVDAIKEALSLQNHSSDTDAVMNDT-EVVSEKFDSQEPTCLQTCLKLYKNGLQGSLTSLMGSLTMMATQYEKHCPPTPETSCGTQFISFKNFKEDLKEFLFIISFD*WEPAQK 441 MWLQNLLLLGTVVCSFS PWQHVDAIKEALSL NHSSDT AVMN+T EVVSE FDSQEPTCLQT LKLYK GL+GSLTSL GSLTMMA YE+HCPPT ETSC TQ I+FK+FKE+LK+FLFII FD WEPAQK Sbjct: 1 MWLQNLLLLGTVVCSFSAPTRPASPVTRPWQHVDAIKEALSLLNHSSDTAAVMNETVEVVSEMFDSQEPTCLQTRLKLYKQGLRGSLTSLSGSLTMMARHYEQHCPPTQETSCETQTITFKSFKENLKDFLFIIPFDCWEPAQK 144
BLAST of GE213314 vs. ExPASy Swiss-Prot
Match: CSF2_SHEEP (Granulocyte-macrophage colony-stimulating factor OS=Ovis aries GN=CSF2 PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 8.658e-54 Identity = 107/144 (74.31%), Postives = 118/144 (81.94%), Query Frame = -3 Query: 13 MWLQNLLLLGTVVCSFSXXXXXXXXXXXPWQHVDAIKEALSLQNHSSDTDAVMNDT-EVVSEKFDSQEPTCLQTCLKLYKNGLQGSLTSLMGSLTMMATQYEKHCPPTPETSCGTQFISFKNFKEDLKEFLFIISFD*WEPAQK 441 MWLQNLLLLGTVVCSFS PWQHVDAIKEALSL N S+DT AVM++T EVVSE FDSQEPTCLQT L+LYK GL+GSLTSL GSLTMMA+ Y+KHCPPT ETSC TQ I+FK+FKE+LK+FLFII FD WEP QK Sbjct: 1 MWLQNLLLLGTVVCSFSAPTRQPSPVTRPWQHVDAIKEALSLLNDSTDTAAVMDETVEVVSEMFDSQEPTCLQTRLELYKQGLRGSLTSLTGSLTMMASHYKKHCPPTQETSCETQIITFKSFKENLKDFLFIIPFDCWEPVQK 144
BLAST of GE213314 vs. ExPASy Swiss-Prot
Match: CSF2_HUMAN (Granulocyte-macrophage colony-stimulating factor OS=Homo sapiens GN=CSF2 PE=1 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 6.645e-46 Identity = 91/144 (63.19%), Postives = 109/144 (75.69%), Query Frame = -3 Query: 13 MWLQNLLLLGTVVCSFSXXXXXXXXXXXPWQHVDAIKEALSLQNHSSDTDAVMNDT-EVVSEKFDSQEPTCLQTCLKLYKNGLQGSLTSLMGSLTMMATQYEKHCPPTPETSCGTQFISFKNFKEDLKEFLFIISFD*WEPAQK 441 MWLQ+LLLLGTV CS S PW+HV+AI+EA L N S DT A MN+T EV+SE FD QEPTCLQT L+LYK GL+GSLT L G LTMMA+ Y++HCPPTPETSC TQ I+F++FKE+LK+FL +I FD WEP Q+ Sbjct: 1 MWLQSLLLLGTVACSISAPARSPSPSTQPWEHVNAIQEARRLLNLSRDTAAEMNETVEVISEMFDLQEPTCLQTRLELYKQGLRGSLTKLKGPLTMMASHYKQHCPPTPETSCATQIITFESFKENLKDFLLVIPFDCWEPVQE 144
BLAST of GE213314 vs. ExPASy Swiss-Prot
Match: CSF2_CERAE (Granulocyte-macrophage colony-stimulating factor OS=Cercopithecus aethiops GN=CSF2 PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 1.480e-45 Identity = 92/144 (63.89%), Postives = 107/144 (74.31%), Query Frame = -3 Query: 13 MWLQNLLLLGTVVCSFSXXXXXXXXXXXPWQHVDAIKEALSLQNHSSDTDAVMNDT-EVVSEKFDSQEPTCLQTCLKLYKNGLQGSLTSLMGSLTMMATQYEKHCPPTPETSCGTQFISFKNFKEDLKEFLFIISFD*WEPAQK 441 MWLQ LLLLGTV CS S PW+HV+AI+EA L N S DT A MN T EVVSE FD QEP+CLQT L+LYK GLQGSLT L G LTMMA+ Y++HCPPTPETSC TQ I+F++FKE+LK+FL +I FD WEP Q+ Sbjct: 1 MWLQGLLLLGTVACSISAPARSPSPGTQPWEHVNAIQEARRLLNLSRDTAAEMNKTVEVVSEMFDLQEPSCLQTRLELYKQGLQGSLTKLKGPLTMMASHYKQHCPPTPETSCATQMITFQSFKENLKDFLLVIPFDCWEPVQE 144
BLAST of GE213314 vs. ExPASy Swiss-Prot
Match: CSF2_PIG (Granulocyte-macrophage colony-stimulating factor OS=Sus scrofa GN=CSF2 PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 9.595e-45 Identity = 92/144 (63.89%), Postives = 106/144 (73.61%), Query Frame = -3 Query: 13 MWLQNLLLLGTVVCSFSXXXXXXXXXXXPWQHVDAIKEALSLQNHSSDTDAVMNDT-EVVSEKFDSQEPTCLQTCLKLYKNGLQGSLTSLMGSLTMMATQYEKHCPPTPETSCGTQFISFKNFKEDLKEFLFIISFD*WEPAQK 441 MWLQNLLLLGTVVCS S PWQHVDAIKEALSL N+S+DT AVMN+T +VV E FD QEPTC+QT L LYK GL+GSLT L LT++A YE+HCP T ETSC TQ I+FK+FK+ L +FLF I FD W P +K Sbjct: 1 MWLQNLLLLGTVVCSISAPTRPPSPVTRPWQHVDAIKEALSLLNNSNDTAAVMNETVDVVCEMFDPQEPTCVQTRLNLYKQGLRGSLTRLKSPLTLLAKHYEQHCPLTEETSCETQSITFKSFKDSLNKFLFTIPFDCWGPVKK 144
BLAST of GE213314 vs. ExPASy Swiss-Prot
Match: CSF2_CANFA (Granulocyte-macrophage colony-stimulating factor OS=Canis familiaris GN=CSF2 PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 6.219e-44 Identity = 91/144 (63.19%), Postives = 107/144 (74.31%), Query Frame = -3 Query: 13 MWLQNLLLLGTVVCSFSXXXXXXXXXXXPWQHVDAIKEALSLQNHSSDTDAVMNDT-EVVSEKFDSQEPTCLQTCLKLYKNGLQGSLTSLMGSLTMMATQYEKHCPPTPETSCGTQFISFKNFKEDLKEFLFIISFD*WEPAQK 441 MWLQNLL LGTVVCS S P QHVDAI+EALSL N+S+D AVMN +VVSE FD + PTCL+T L+LYK GLQGSLTSL LTMMA Y++HCPPTPE+ C TQ I+FK+FKE+LK+FLF I FD W+P +K Sbjct: 1 MWLQNLLFLGTVVCSISAPTRSPTLVTRPSQHVDAIQEALSLLNNSNDVTAVMNKAVKVVSEVFDPEGPTCLETRLQLYKEGLQGSLTSLKNPLTMMANHYKQHCPPTPESPCATQNINFKSFKENLKDFLFNIPFDCWKPVKK 144
BLAST of GE213314 vs. ExPASy Swiss-Prot
Match: CSF2_FELCA (Granulocyte-macrophage colony-stimulating factor OS=Felis catus GN=CSF2 PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 3.087e-43 Identity = 92/144 (63.89%), Postives = 103/144 (71.53%), Query Frame = -3 Query: 13 MWLQNLLLLGTVVCSFSXXXXXXXXXXXPWQHVDAIKEALSLQNHSSDTDAVMNDT-EVVSEKFDSQEPTCLQTCLKLYKNGLQGSLTSLMGSLTMMATQYEKHCPPTPETSCGTQFISFKNFKEDLKEFLFIISFD*WEPAQK 441 MWLQNLL L TVVCS S PWQHVDA+KEALSL N+SS+ AVMN+T EVVSE FD +EP CLQT LKLY+ GL+GSL SL L MMA Y++HCP TPET C TQ I+FKNFKE LK+FLF FD W P QK Sbjct: 1 MWLQNLLFLNTVVCSISAPTSSPSSVTRPWQHVDAMKEALSLLNNSSEITAVMNETVEVVSEMFDPEEPKCLQTHLKLYEQGLRGSLISLKEPLRMMANHYKQHCPLTPETPCETQTITFKNFKEKLKDFLFNNPFDCWGPDQK 144
BLAST of GE213314 vs. ExPASy Swiss-Prot
Match: CSF2_CAVPO (Granulocyte-macrophage colony-stimulating factor (Fragment) OS=Cavia porcellus GN=CSF2 PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 6.876e-43 Identity = 89/140 (63.57%), Postives = 104/140 (74.29%), Query Frame = -3 Query: 28 MWLQNLLLLGTVVCSFSXXXXXXXXXXXPWQHVDA-IKEALSLQNHSSDTDAVMNDT-EVVSEKFDSQEPTCLQTCLKLYKNGLQGSLTSLMGSLTMMATQYEKHCPPTPETSCGTQFISFKNFKEDLKEFLFIISFD*W 441 MWLQNLLLLGTVVCS W+HVDA I EALSL NH+SD AVMN+T EVV ++F+ QEPTCLQT L L+ GL+G+LT L GSLT+MA Y++HCPPTPETSC TQ I+FK+FKE+LK FLF I FD W Sbjct: 1 MWLQNLLLLGTVVCSICAPTDLLSPVTQSWKHVDATINEALSLLNHTSDPAAVMNETVEVVYDQFEPQEPTCLQTRLALFMKGLRGNLTRLEGSLTLMANFYKQHCPPTPETSCMTQIITFKSFKENLKRFLFAIPFDCW 140
BLAST of GE213314 vs. ExPASy Swiss-Prot
Match: CSF2_RAT (Granulocyte-macrophage colony-stimulating factor OS=Rattus norvegicus GN=Csf2 PE=2 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 1.640e-36 Identity = 77/144 (53.47%), Postives = 98/144 (68.06%), Query Frame = -3 Query: 13 MWLQNLLLLGTVVCSFSXXXXXXXXXXXPWQHVDAIKEALSLQNHSSDTDAVMN-DTEVVSEKFDSQEPTCLQTCLKLYKNGLQGSLTSLMGSLTMMATQYEKHCPPTPETSCGTQFISFKNFKEDLKEFLFIISFD*WEPAQK 441 MWLQNLL LG VV SFS PW+HVDAIKEALSL N + N D +++S +F Q PTC+QT LKLYK GL+G+LT L G+LTM+A+ Y+ +CPPTPET C + +F++F ++LK FLF I FD W+P QK Sbjct: 1 MWLQNLLFLGIVVYSFSAPTRSPNPVTRPWKHVDAIKEALSLLNDMRALENEKNEDVDIISNEFSIQRPTCVQTRLKLYKQGLRGNLTKLNGALTMIASHYQTNCPPTPETDCEIEVTTFEDFIKNLKGFLFDIPFDCWKPVQK 144 The following BLAST results are available for this feature:
BLAST of GE213314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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