GE213303
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GE213303 vs. ExPASy Swiss-Prot
Match: GP2_SOLLC (Polygalacturonase non-catalytic subunit AroGP2 OS=Solanum lycopersicum GN=GP2 PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.647e-43 Identity = 82/113 (72.57%), Postives = 88/113 (77.88%), Query Frame = -1 Query: 238 TTENVNXXXXXXXXXXXXXXXXXXVTKSVSCHQSLFSYLLYYCHSVPKVRVYEADILDANTKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGKIEVCHWIFENDMTWTTAD 576 TTEN N VTKSVSCHQ+L+ LLYYCHSVPKVRVYEADILD N+KAKINHGVAICH+DTS+W P HGAF+ALGSGPGKIEVCHWIFENDMTW TAD Sbjct: 517 TTENTNGSKGNIMIGSIKGINGGKVTKSVSCHQTLYPSLLYYCHSVPKVRVYEADILDPNSKAKINHGVAICHVDTSSWGPRHGAFIALGSGPGKIEVCHWIFENDMTWATAD 629
BLAST of GE213303 vs. ExPASy Swiss-Prot
Match: GP3_SOLLC (Polygalacturonase non-catalytic subunit AroGP3 OS=Solanum lycopersicum GN=GP3 PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.151e-43 Identity = 82/113 (72.57%), Postives = 88/113 (77.88%), Query Frame = -1 Query: 238 TTENVNXXXXXXXXXXXXXXXXXXVTKSVSCHQSLFSYLLYYCHSVPKVRVYEADILDANTKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGKIEVCHWIFENDMTWTTAD 576 TTEN N VTKSVSCHQ+L+ LLYYCHSVPKVRVYEADILD N+KAKINHGVAICH+DTS+W P HGAF+ALGSGPGKIEVCHWIFENDMTW TAD Sbjct: 520 TTENTNGSKGNIMIGSIKGINGGKVTKSVSCHQTLYPSLLYYCHSVPKVRVYEADILDPNSKAKINHGVAICHVDTSSWGPRHGAFVALGSGPGKIEVCHWIFENDMTWATAD 632
BLAST of GE213303 vs. ExPASy Swiss-Prot
Match: GP1_SOLLC (Polygalacturonase-1 non-catalytic subunit beta OS=Solanum lycopersicum GN=GP1 PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.394e-42 Identity = 75/88 (85.23%), Postives = 82/88 (93.18%), Query Frame = -1 Query: 238 TKSVSCHQSLFSYLLYYCHSVPKVRVYEADILDANTKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGKIEVCHWIFENDMTWTTAD 501 TKSVSCHQ+L+ YLLYYCHSVPKVRVYEADILD N+K KINHGVAICH+DTS+W P+HGAF+ALGSGPGKIEVCHWIFENDMTW AD Sbjct: 543 TKSVSCHQTLYPYLLYYCHSVPKVRVYEADILDPNSKVKINHGVAICHVDTSSWGPSHGAFVALGSGPGKIEVCHWIFENDMTWAIAD 630
BLAST of GE213303 vs. ExPASy Swiss-Prot
Match: JP650_ARATH (Probable polygalacturonase non-catalytic subunit JP650 OS=Arabidopsis thaliana GN=JP650 PE=2 SV=2) HSP 1 Score: 166.392 bits (420), Expect = 9.992e-41 Identity = 75/113 (66.37%), Postives = 86/113 (76.11%), Query Frame = -1 Query: 238 TTENVNXXXXXXXXXXXXXXXXXXVTKSVSCHQSLFSYLLYYCHSVPKVRVYEADILDANTKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGKIEVCHWIFENDMTWTTAD 576 TTENV +TK+VSCHQSL+ YLLYYCHSVPKVRVYEAD+L+ N+K KINHG+AICH+DTS+W P+HGAFLALGS PG+IEVCHWIFENDM W AD Sbjct: 514 TTENVAGSKEKVVIGKVNGINGGKLTKAVSCHQSLYPYLLYYCHSVPKVRVYEADLLELNSKKKINHGIAICHMDTSSWGPSHGAFLALGSKPGRIEVCHWIFENDMNWAIAD 626
BLAST of GE213303 vs. ExPASy Swiss-Prot
Match: Y639_ARATH (Probable polygalacturonase non-catalytic subunit At1g60390 OS=Arabidopsis thaliana GN=At1g60390 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 3.797e-40 Identity = 76/113 (67.26%), Postives = 85/113 (75.22%), Query Frame = -1 Query: 238 TTENVNXXXXXXXXXXXXXXXXXXVTKSVSCHQSLFSYLLYYCHSVPKVRVYEADILDANTKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGKIEVCHWIFENDMTWTTAD 576 TTENV VT++VSCHQSL+ YLLYYCHSVP+VRVYE D+LD + KINHGVAICH+DTSAWSP+HGAFLALGSGPG+IEVCHWIFENDMTW D Sbjct: 512 TTENVVGSKKKVVIGKVNGINGGDVTRAVSCHQSLYPYLLYYCHSVPRVRVYETDLLDPKSLEKINHGVAICHIDTSAWSPSHGAFLALGSGPGQIEVCHWIFENDMTWNIID 624
BLAST of GE213303 vs. ExPASy Swiss-Prot
Match: BURPC_ORYSJ (BURP domain-containing protein 12 OS=Oryza sativa subsp. japonica GN=BURP12 PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.105e-39 Identity = 71/88 (80.68%), Postives = 79/88 (89.77%), Query Frame = -1 Query: 238 TKSVSCHQSLFSYLLYYCHSVPKVRVYEADILDANTKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGKIEVCHWIFENDMTWTTAD 501 T+SVSCHQSLF YL+YYCHSVPKVRVYEADI+ A++ KINHGVAICHLDTS WSPTHGAF+ALG PG++EVCHWIFE DMTWT AD Sbjct: 540 TRSVSCHQSLFPYLVYYCHSVPKVRVYEADIMAADSDQKINHGVAICHLDTSDWSPTHGAFIALGGKPGEVEVCHWIFEGDMTWTVAD 627
BLAST of GE213303 vs. ExPASy Swiss-Prot
Match: JP630_ARATH (Probable polygalacturonase non-catalytic subunit JP630 OS=Arabidopsis thaliana GN=JP630 PE=2 SV=2) HSP 1 Score: 160.614 bits (405), Expect = 5.483e-39 Identity = 69/88 (78.41%), Postives = 77/88 (87.50%), Query Frame = -1 Query: 238 TKSVSCHQSLFSYLLYYCHSVPKVRVYEADILDANTKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGKIEVCHWIFENDMTWTTAD 501 TKSVSCHQSL+ YLLYYCHSVPKVRVYE+D+LD +KAKINHG+AICH+DTSAW HGAF+ LGS PG+IEVCHWIFENDM W AD Sbjct: 535 TKSVSCHQSLYPYLLYYCHSVPKVRVYESDLLDPKSKAKINHGIAICHMDTSAWGANHGAFMLLGSRPGQIEVCHWIFENDMNWAIAD 622
BLAST of GE213303 vs. ExPASy Swiss-Prot
Match: BURPG_ORYSJ (BURP domain-containing protein 16 OS=Oryza sativa subsp. japonica GN=BURP16 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 8.478e-32 Identity = 59/88 (67.05%), Postives = 69/88 (78.41%), Query Frame = -1 Query: 238 TKSVSCHQSLFSYLLYYCHSVPKVRVYEADILDANTKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGKIEVCHWIFENDMTWTTAD 501 T SVSCH+ LF Y++YYCHSVPK+RVYEA+IL TK KIN GVAICH+DTSAW+ H AF+ALG PG+ +VCHWIF MTW AD Sbjct: 255 TSSVSCHEYLFPYMVYYCHSVPKIRVYEAEILSVQTKEKINSGVAICHIDTSAWNAGHPAFVALGGKPGQNKVCHWIFNGSMTWVIAD 342
BLAST of GE213303 vs. ExPASy Swiss-Prot
Match: BURPE_ORYSJ (BURP domain-containing protein 14 OS=Oryza sativa subsp. japonica GN=BURP14 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.655e-27 Identity = 55/70 (78.57%), Postives = 60/70 (85.71%), Query Frame = -1 Query: 292 TKSVSCHQSLFSYLLYYCHSVPKVRVYEADILDANTKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGK 501 T+SVSCHQSLF YL+YYCHSVP VRVYEADIL ++ KINHGVAICHLDTS WSP HGAF+ALG PGK Sbjct: 603 TRSVSCHQSLFPYLVYYCHSVPTVRVYEADILAVDSNQKINHGVAICHLDTSDWSPNHGAFIALGGKPGK 672
BLAST of GE213303 vs. ExPASy Swiss-Prot
Match: BURP5_ORYSJ (BURP domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=BURP5 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 2.565e-12 Identity = 29/82 (35.37%), Postives = 46/82 (56.10%), Query Frame = -1 Query: 247 VSCHQSLFSYLLYYCHSVPKVRVYEADILDANTKAKINHGVAICHLDTSAWSPTHGAFLALGSGPGKIEVCHWIFENDMTWT 492 ++CH + Y ++ CH R Y+A ++ + A VA+CH DT+ W+P H AF LG PG + VCH++ + + WT Sbjct: 242 IACHPESYPYAVFMCHLTEATRAYKASLVGKDGAAV--EAVAVCHTDTAEWNPKHAAFQVLGVKPGTVPVCHFVQPDVVVWT 321 The following BLAST results are available for this feature:
BLAST of GE213303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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