GE213289

Overview
NameGE213289
Unique NameGE213289
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5217 contig Csv1_Contig5217:547..1086. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GE213289 vs. ExPASy Swiss-Prot
Match: PUR5_VIGUN (Phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial OS=Vigna unguiculata GN=PUR5 PE=2 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 1.526e-68
Identity = 133/167 (79.64%), Postives = 142/167 (85.03%), Query Frame = 1
Query:   19 AGTSEGLTYKDAGVDIDAGSELVRRIAKMAXXXXXXXXXXXXXDSYLVAGTDGVGTKLELAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFLDYFATSHLEVDLAEKVIKGIVDGYQQSDCVLLGGETAEMPDFYAAGEYDLSGFAVGIVKKDSVVDGKNIVPGDV 519
            A  S+GLTY+DAGVDIDAG+ELVRRIAKMA             DSYLVAGTDGVGTKL LAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFLDYFAT  L+VD+AEKV+KGIVDG +QSDCVLLGGETAEMP  Y  GEYDLSG AVGIVKKDSV++GKNIV GDV
Sbjct:   60 AEASQGLTYRDAGVDIDAGAELVRRIAKMAPGIGGFGGLYPLGDSYLVAGTDGVGTKLMLAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFLDYFATGRLDVDVAEKVVKGIVDGCKQSDCVLLGGETAEMPGLYKEGEYDLSGCAVGIVKKDSVINGKNIVAGDV 226          
BLAST of GE213289 vs. ExPASy Swiss-Prot
Match: PUR5_ARATH (Phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic OS=Arabidopsis thaliana GN=PUR5 PE=2 SV=2)

HSP 1 Score: 257.684 bits (657), Expect = 2.603e-68
Identity = 130/164 (79.27%), Postives = 143/164 (87.20%), Query Frame = 1
Query:   28 SEGLTYKDAGVDIDAGSELVRRIAKMAXXXXXXXXXXXXXDSYLVAGTDGVGTKLELAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFLDYFATSHLEVDLAEKVIKGIVDGYQQSDCVLLGGETAEMPDFYAAGEYDLSGFAVGIVKKDSVVDGKNIVPGDV 519
            ++ L YKD+GVDIDAG+ELV+RIAKMA             DSYLVAGTDGVGTKL+LAFETGIHDTIGIDLVAMSVNDI+TSGAKPLFFLDYFATS L+VDLAEKVIKGIV+G +QS+C LLGGETAEMPDFYA GEYDLSGFAVGIVKK SV++GKNIV GDV
Sbjct:   63 TDSLNYKDSGVDIDAGAELVKRIAKMAPGIGGFGGLFPLGDSYLVAGTDGVGTKLKLAFETGIHDTIGIDLVAMSVNDIITSGAKPLFFLDYFATSRLDVDLAEKVIKGIVEGCRQSECALLGGETAEMPDFYAEGEYDLSGFAVGIVKKTSVINGKNIVAGDV 226          
BLAST of GE213289 vs. ExPASy Swiss-Prot
Match: PUR5_SORC5 (Phosphoribosylformylglycinamidine cyclo-ligase OS=Sorangium cellulosum (strain So ce56) GN=purM PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 5.103e-48
Identity = 93/173 (53.76%), Postives = 122/173 (70.52%), Query Frame = 1
Query:   37 LTYKDAGVDIDAGSELVRRIAKMAXXXXXXXXXXXXX-------------DSYLVAGTDGVGTKLELAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFLDYFATSHLEVDLAEKVIKGIVDGYQQSDCVLLGGETAEMPDFYAAGEYDLSGFAVGIVKKDSVVDGKNIVPGD 516
            +TY++AGVDIDAG  LV RI ++A                          +  LV+GTDGVGTKL++AF TG+HDT+GIDLVAM VND++T GA+PLFFLDYFAT  L+VD+ E V++GI +G +Q+ C L+GGETAE+P  YA GEYDL+GFAVG+V++  ++DGK I  GD
Sbjct:    3 VTYREAGVDIDAGDALVERIKRLAKPTRIPEVLADVGGFAGLCALPGGLSEPVLVSGTDGVGTKLKVAFATGVHDTVGIDLVAMCVNDVLTVGARPLFFLDYFATGKLDVDVGEAVVRGIAEGCKQAGCALIGGETAELPGMYADGEYDLAGFAVGVVERSRILDGKRIAAGD 175          
BLAST of GE213289 vs. ExPASy Swiss-Prot
Match: PUR5_MYXXD (Phosphoribosylformylglycinamidine cyclo-ligase OS=Myxococcus xanthus (strain DK 1622) GN=purM PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.257e-46
Identity = 97/175 (55.43%), Postives = 117/175 (66.86%), Query Frame = 1
Query:   34 GLTYKDAGVDIDAGSELVRRIAKMAXXXXXXXXXXXXX--------------DSYLVAGTDGVGTKLELAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFLDYFATSHLEVDLAEKVIKGIVDGYQQSDCVLLGGETAEMPDFYAAGEYDLSGFAVGIVKKDSVVDGKNIVPGD 516
            G TYK +GVDI+AG   V RI   A                              LVAGTDGVGTKL++AF  G H T+GIDLVAMSVNDI+T GA+PLFFLDYFAT  LEVD A +V+KGI  G +Q+ C LLGGETAEMP FYA GEYDL+GF VG+V++ +++DGK++ PGD
Sbjct:    2 GTTYKQSGVDIEAGDAFVERIKPHAARTMRPEVMGGVGGFGGLFALPPGKYQQPVLVAGTDGVGTKLKVAFAAGRHGTVGIDLVAMSVNDILTCGAEPLFFLDYFATGRLEVDDAAEVVKGIALGCEQAGCALLGGETAEMPGFYARGEYDLAGFCVGVVERAAIIDGKSVKPGD 176          
BLAST of GE213289 vs. ExPASy Swiss-Prot
Match: PUR5_CHRVO (Phosphoribosylformylglycinamidine cyclo-ligase OS=Chromobacterium violaceum GN=purM PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 6.238e-46
Identity = 97/174 (55.75%), Postives = 116/174 (66.67%), Query Frame = 1
Query:   37 LTYKDAGVDIDAGSELVRRIAKMAXXXXXXXXXXXXX-------------DSYLVAGTDGVGTKLELAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFLDYFATSHLEVDLAEKVIKGIVDGYQQSDCVLLGGETAEMPDFYAAGEYDLSGFAVGIVKKDSVVDGKNIVPGDV 519
            L+Y+DAGVDIDAG  LV  I   A                          +  LV+GTDGVGTKL+LAF+   HDT+GIDLVAMSVNDI+  GA+PLFFLDYFA   L+V  A +VIKGI  G +Q+ C L GGETAEMP  Y AGEYDL+GFAVG+V+K  V+ G++IVPGDV
Sbjct:    6 LSYRDAGVDIDAGDALVENIKPFAKRTMRPEVLGGIGGFGALVEISKKYKEPVLVSGTDGVGTKLKLAFDWNRHDTVGIDLVAMSVNDILVQGAEPLFFLDYFACGKLDVAQATEVIKGIAAGCEQAGCALTGGETAEMPGMYPAGEYDLAGFAVGVVEKSKVISGRDIVPGDV 179          
BLAST of GE213289 vs. ExPASy Swiss-Prot
Match: PUR5_POLSJ (Phosphoribosylformylglycinamidine cyclo-ligase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=purM PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 8.147e-46
Identity = 96/178 (53.93%), Postives = 115/178 (64.61%), Query Frame = 1
Query:   25 TSEGLTYKDAGVDIDAGSELVRRIAKMAXXXXXXXXXXXXX-------------DSYLVAGTDGVGTKLELAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFLDYFATSHLEVDLAEKVIKGIVDGYQQSDCVLLGGETAEMPDFYAAGEYDLSGFAVGIVKKDSVVDGKNIVPGDV 519
            +S  L+YKDAGVDIDAG  LV RI  +A                          +  LV+GTDGVGTKL LAFE  +HDT+GIDLVAMSVND++  GA+PLFFLDYFA   L+VD A  V+ GI  G + S C L+GGETAEMP  Y  GEYDL+GFAVG V+K  ++ GK + PGDV
Sbjct:    5 SSSPLSYKDAGVDIDAGDALVERIKPLAKKTMREGVLAGIGGFGALFEVPKRYKEPVLVSGTDGVGTKLRLAFEWNMHDTVGIDLVAMSVNDVLVQGAEPLFFLDYFACGKLDVDTAAAVVGGIAKGCELSGCALIGGETAEMPGMYPEGEYDLAGFAVGAVEKSKILTGKEVQPGDV 182          
BLAST of GE213289 vs. ExPASy Swiss-Prot
Match: PUR5_LARHH (Phosphoribosylformylglycinamidine cyclo-ligase OS=Laribacter hongkongensis (strain HLHK9) GN=purM PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 8.147e-46
Identity = 95/177 (53.67%), Postives = 118/177 (66.67%), Query Frame = 1
Query:   28 SEGLTYKDAGVDIDAGSELVRRIAKMAXXXXXXXXXXXXX-------------DSYLVAGTDGVGTKLELAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFLDYFATSHLEVDLAEKVIKGIVDGYQQSDCVLLGGETAEMPDFYAAGEYDLSGFAVGIVKKDSVVDGKNIVPGDV 519
            ++ L+Y+DAGVDIDAG +LV  I   A                          +  LV+GTDGVGTKL+LAF+   HDT+GIDLVAMSVNDI+  GA+PLFFLDYFA   L+V  A  VIKGI +G +Q+ C L+GGETAEMP  Y  GEYDL+GFAVG+V+K  V+ G++I PGDV
Sbjct:    2 TQSLSYRDAGVDIDAGDQLVENIKPFAKRTMRPEVLGGLGGFGALVEISKKYREPVLVSGTDGVGTKLKLAFDWNRHDTVGIDLVAMSVNDILVQGAEPLFFLDYFACGKLDVAQATDVIKGIAEGCEQAGCALIGGETAEMPGMYPVGEYDLAGFAVGVVEKSQVITGRDIRPGDV 178          
BLAST of GE213289 vs. ExPASy Swiss-Prot
Match: PUR5_RALEJ (Phosphoribosylformylglycinamidine cyclo-ligase OS=Ralstonia eutropha (strain JMP134) GN=purM PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.390e-45
Identity = 99/186 (53.23%), Postives = 122/186 (65.59%), Query Frame = 1
Query:    1 ISAAARAGTSEGLTYKDAGVDIDAGSELVRRI-------------AKMAXXXXXXXXXXXXXDSYLVAGTDGVGTKLELAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFLDYFATSHLEVDLAEKVIKGIVDGYQQSDCVLLGGETAEMPDFYAAGEYDLSGFAVGIVKKDSVVDGKNIVPGDV 519
            +SA++ AG + GL+Y+DAGVDIDAG  LV RI             A +              +  LV+GTDGVGTKL+LAF+   HDT+G DLVAMSVNDI+  GA+PLFFLDYFA   L+VD A  VI+GI  G + + C L+GGETAEMP  Y  GEYDL+GFAVG V+K  ++DG  I PGDV
Sbjct:    1 MSASSTAGQA-GLSYRDAGVDIDAGDALVDRIKPFAKRTMREGVMAGIGGFGALFELSKKYQEPVLVSGTDGVGTKLKLAFQLNRHDTVGQDLVAMSVNDILVQGAEPLFFLDYFACGKLDVDTAATVIQGIARGCELAGCALIGGETAEMPTMYPDGEYDLAGFAVGAVEKKKIIDGTTITPGDV 185          
BLAST of GE213289 vs. ExPASy Swiss-Prot
Match: PUR5_RALEH (Phosphoribosylformylglycinamidine cyclo-ligase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=purM PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.390e-45
Identity = 99/186 (53.23%), Postives = 121/186 (65.05%), Query Frame = 1
Query:    1 ISAAARAGTSEGLTYKDAGVDIDAGSELVRRI-------------AKMAXXXXXXXXXXXXXDSYLVAGTDGVGTKLELAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFLDYFATSHLEVDLAEKVIKGIVDGYQQSDCVLLGGETAEMPDFYAAGEYDLSGFAVGIVKKDSVVDGKNIVPGDV 519
            +SA+  AG + GL+Y+DAGVDIDAG  LV RI             A +              +  LV+GTDGVGTKL+LAF+   HDT+G DLVAMSVNDI+  GA+PLFFLDYFA   L+VD A  VI+GI  G + + C L+GGETAEMP  Y  GEYDL+GFAVG V+K  ++DG  I PGDV
Sbjct:    1 MSASPTAGQA-GLSYRDAGVDIDAGDALVDRIKPFAKRTMREGVMAGIGGFGALFELSKKFQEPVLVSGTDGVGTKLKLAFQLNRHDTVGQDLVAMSVNDILVQGAEPLFFLDYFACGKLDVDTAATVIQGIARGCELAGCALIGGETAEMPSMYPDGEYDLAGFAVGAVEKKKIIDGSTITPGDV 185          
BLAST of GE213289 vs. ExPASy Swiss-Prot
Match: PUR5_CUPTR (Phosphoribosylformylglycinamidine cyclo-ligase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=purM PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.390e-45
Identity = 99/186 (53.23%), Postives = 121/186 (65.05%), Query Frame = 1
Query:    1 ISAAARAGTSEGLTYKDAGVDIDAGSELVRRI-------------AKMAXXXXXXXXXXXXXDSYLVAGTDGVGTKLELAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFLDYFATSHLEVDLAEKVIKGIVDGYQQSDCVLLGGETAEMPDFYAAGEYDLSGFAVGIVKKDSVVDGKNIVPGDV 519
            +SA+  AG + GL+Y+DAGVDIDAG  LV RI             A +              +  LV+GTDGVGTKL+LAF+   HDT+G DLVAMSVNDI+  GA+PLFFLDYFA   L+VD A  VI+GI  G + + C L+GGETAEMP  Y  GEYDL+GFAVG V+K  ++DG  I PGDV
Sbjct:    1 MSASPTAGQA-GLSYRDAGVDIDAGDALVDRIKPFAKRTMREGVMAGIGGFGALFELSKKYQEPVLVSGTDGVGTKLKLAFQLNRHDTVGQDLVAMSVNDILVQGAEPLFFLDYFACGKLDVDTAATVIQGIARGCELAGCALIGGETAEMPSMYPDGEYDLAGFAVGAVEKKKIIDGSTITPGDV 185          
The following BLAST results are available for this feature:
BLAST of GE213289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 485
Match NameE-valueIdentityDescription
PUR5_VIGUN1.526e-6879.64Phosphoribosylformylglycinamidine cyclo-ligase, ch... [more]
PUR5_ARATH2.603e-6879.27Phosphoribosylformylglycinamidine cyclo-ligase, ch... [more]
PUR5_SORC55.103e-4853.76Phosphoribosylformylglycinamidine cyclo-ligase OS=... [more]
PUR5_MYXXD1.257e-4655.43Phosphoribosylformylglycinamidine cyclo-ligase OS=... [more]
PUR5_CHRVO6.238e-4655.75Phosphoribosylformylglycinamidine cyclo-ligase OS=... [more]
PUR5_POLSJ8.147e-4653.93Phosphoribosylformylglycinamidine cyclo-ligase OS=... [more]
PUR5_LARHH8.147e-4653.67Phosphoribosylformylglycinamidine cyclo-ligase OS=... [more]
PUR5_RALEJ1.390e-4553.23Phosphoribosylformylglycinamidine cyclo-ligase OS=... [more]
PUR5_RALEH1.390e-4553.23Phosphoribosylformylglycinamidine cyclo-ligase OS=... [more]
PUR5_CUPTR1.390e-4553.23Phosphoribosylformylglycinamidine cyclo-ligase OS=... [more]

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Properties
Property NameValue
Genbank description143 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.