FC871724

Overview
NameFC871724
Unique NameFC871724
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length515
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13516 contig Csv1_Contig13516:1..515. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
[Close]
BLAST of FC871724 vs. ExPASy Swiss-Prot
Match: BLI3_NEUCR (Protein bli-3 OS=Neurospora crassa GN=bli-3 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 4.581e-16
Identity = 42/123 (34.15%), Postives = 70/123 (56.91%), Query Frame = 3 
Query:    3 KFGDLEHSKDVQVTFQDTKTQNWVSIAGDATVTQHDDPRVKQYWSKGIGVWFGDLGDGKHDSGPDDPRITLIEVKAKHIAYWKKTVSSAGFVKEVVGAGITGNLPDTGLTREITRNDIETARS 371
            K  DL+  + + ++F ++ T +W S++G A++    D  V+++++  +  WFGDLGDG HD GP+DPR+ +I VK     Y   T +  G V +V    ITG        REI+  ++++ RS
Sbjct:   86 KTDDLKSDEHINISFLNSTTGDWASVSGTASIVTDRD-LVRKHYNPHLKAWFGDLGDGVHDGGPEDPRVGVIRVKMVTAHYAISTKNIVGKVADVAQGVITGKPATVNKLREISEQEVQSWRS 207
The following BLAST results are available for this feature:
BLAST of FC871724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
BLI3_NEUCR4.581e-1634.15Protein bli-3 OS=Neurospora crassa GN=bli-3 PE=2 S... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAK1CE10FM2 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK1CE10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871724 ID=FC871724; Name=FC871724; organism=Citrus sinensis; type=EST; length=515bp
CCAAGTTTGGCGACCTCGAGCATTCCAAGGATGTGCAAGTCACTTTCCAA
GATACAAAGACACAAAACTGGGTCAGTATCGCAGGAGATGCTACGGTAAC
ACAACACGACGACCCAAGAGTCAAGCAGTACTGGAGCAAAGGGATTGGCG
TCTGGTTCGGCGATCTAGGTGATGGAAAGCACGACAGCGGTCCGGATGAT
CCAAGAATCACCCTGATTGAAGTCAAGGCCAAGCACATTGCCTATTGGAA
GAAGACGGTCAGTTCTGCTGGCTTCGTAAAGGAGGTTGTTGGTGCAGGCA
TCACTGGAAACCTCCCCGATACTGGCTTGACTCGTGAGATTACTCGTAAT
GATATCGAGACAGCACGCAGCCAAGCGACCACCAGCTAGATTTGTGTACA
TACATGTATGAATATCCCATGATAACAAAGTCCTATGTTTGACATGGGCA
CTCTCTACGTCTACCAACAACAAACTGTTCATGCCTAAAAAAAAAAAAAA
AAAAAAAAAAAAAAA
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