FC871714

Overview
NameFC871714
Unique NameFC871714
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6632 contig Csv1_Contig6632:1..787. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of FC871714 vs. ExPASy Swiss-Prot
Match: EXEC1_ARATH (Protein EXECUTER 1, chloroplastic OS=Arabidopsis thaliana GN=EX1 PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 8.335e-37
Identity = 77/127 (60.63%), Postives = 97/127 (76.38%), Query Frame = 1 
Query:    1 RKYGQWSG--EGEKSSDMEFFEYVEAVKLTGDLNVPAGEVTFRAKIGKGSRLPNRGKFPDELGVVASYSGQGRIADFGFRNPKWVDGELLQLNGKGMGPYVKGAD-LGFLYVVPEQSFLVLFNRLKL 372
            RK+GQW G  E +K +D+EF+EYVEAVKLTGD  VPAG+V FRAKIG+   LP++G  P+E GV+A Y GQGR+AD GFRNP+WVDGEL+ L+GK    YVKG   +GF+Y  PE  F++ FNRL+L
Sbjct:  560 RKFGQWKGGKESKKPTDIEFYEYVEAVKLTGDPYVPAGKVAFRAKIGRRYELPHKGLIPEEFGVIARYKGQGRLADPGFRNPRWVDGELVILDGK----YVKGGPVVGFVYWAPEYHFVMFFNRLRL 682
The following BLAST results are available for this feature:
BLAST of FC871714 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
EXEC1_ARATH8.335e-3760.63Protein EXECUTER 1, chloroplastic OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAK3BA10FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK3BA10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871714 ID=FC871714; Name=FC871714; organism=Citrus sinensis; type=EST; length=787bp
CGAAAATACGGTCAATGGAGTGGTGAGGGTGAGAAGTCTTCAGATATGGA
GTTTTTTGAATACGTGGAGGCTGTAAAACTAACTGGGGACCTTAATGTTC
CCGCTGGTGAGGTGACATTTCGGGCTAAAATTGGGAAAGGGAGTCGCCTC
CCTAACCGTGGGAAGTTTCCAGATGAGTTGGGCGTGGTTGCTAGTTACAG
TGGTCAAGGAAGAATAGCAGACTTTGGGTTCAGAAATCCTAAATGGGTTG
ATGGTGAACTTCTTCAACTCAACGGCAAGGGGATGGGACCATACGTCAAA
GGCGCAGATCTTGGTTTCCTTTACGTTGTCCCCGAGCAAAGTTTCCTTGT
GTTGTTTAACCGTTTAAAGCTGCCAGACTAAGCCATCTGGTTAATATTTC
GTTAACTCAAAATCACCTATGATACAGCTAATATTAGATGCGATGCGAGT
ACTTTCCTATACAGCAGCTGAAAATGAGAGTTTGTTTCTCCGTCTTTTGT
AATCTATAAGTTATCTCTGAGGATGCTCGTGCATTTGCATCTTCCGATTG
CTTGGAAGCGTCGGTGAATCATTGAGGGACATAAGCGTGTGAACTGGACC
ATGTAAGCTTAAAGAGATCAACTTTGGAGTGAAAAAGCAGAGAGAAATTT
TTCTGTGGATCCATAAAGTAGAAAAAGCAAACCATAATGGTGATTACTTT
TTGTTATTGAAGGCATTAAAAGCATGATCTTTAATCTTTGCTTGTTTCTT
TTTGGTATATACTTACTTTTGGAATTGAATACCCTCT
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