FC871708

Overview
NameFC871708
Unique NameFC871708
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length720
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10620 contig Csv1_Contig10620:303..1022. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC871708 vs. ExPASy Swiss-Prot
Match: MOMAS_ORYSJ (Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.011e-23
Identity = 76/205 (37.07%), Postives = 101/205 (49.27%), Query Frame = 2
Query:   14 YIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIPANYYGVSKFGILGLVKGLAAELGRYGIRVDCVSHTYGLAMTEAIAS----------------------------IANAALYNMAKDDDTSYVGKQNLLVNGG 544
            Y+HCDV+NE +V   VD  VA+FGKLD++ N    +       + +  K D E +LAVN +G FL  KHAARVM P RRG I+ T    ++            ++ Y  SK  ++G  +  A ELGR+GIRV+CVS   G+A   A A+                            IA AAL+     DD  YV  QNL V+GG
Sbjct:   68 YVHCDVTNEGDVAAAVDHAVARFGKLDVMFNNA-GVSGPPCFRMSECTKEDFERVLAVNLVGPFLGTKHAARVMAPARRGSIISTASLSSSV-------SGAASHAYTTSKHALVGFTENAAGELGRHGIRVNCVSPA-GVATPLARAAMGMDDEAIEAIMANSANLKGAGALKADDIAAAALF--LASDDGRYVSGQNLRVDGG 261          
BLAST of FC871708 vs. ExPASy Swiss-Prot
Match: ABA2_ARATH (Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.125e-19
Identity = 73/211 (34.60%), Postives = 100/211 (47.39%), Query Frame = 2
Query:   14 YIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIPANYYGVSKFGILGLVKGLAAELGRYGIRVDCVSHTYGLAMTEAIA---------------------------------SIANAALYNMAKDDDTSYVGKQNLLVNGGF 547
            +IH DV  E ++ N VD  V  FG LDIL+N    L       I +   S+ E    VN  G FL  KHAARVM+P ++G I+     G      + G    P +Y G SK  +LGL + +AAELG++GIRV+CVS  Y +A   A+A                                  +ANA L+     DD+ Y+   NL+++GGF
Sbjct:   75 FIHGDVRVEDDISNAVDFAVKNFGTLDILINNA-GLCGAPCPDIRNYSLSEFEMTFDVNVKGAFLSMKHAARVMIPEKKGSIVSLCSVGGV----VGGVG--PHSYVG-SKHAVLGLTRSVAAELGQHGIRVNCVS-PYAVATKLALAHLPEEERTEDAFVGFRNFAAANANLKGVELTVDDVANAVLF--LASDDSRYISGDNLMIDGGF 274          
BLAST of FC871708 vs. ExPASy Swiss-Prot
Match: TS2_MAIZE (Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.800e-14
Identity = 54/147 (36.73%), Postives = 79/147 (53.74%), Query Frame = 2
Query:    8 VCYIHCDVSNEREVINLVDTTVAKFG-KLDILVNTGCNL--EYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIPANYYGVSKFGILGLVKGLAAELGRYGIRVDCVSHTYGLA 439
            V ++ CDVS E +V   VD  +++ G +LD+  N    L  + R   SIL    ++ + +L VN +G  L  KHAAR M PRR G I+        + A + G   +  + Y  SK  I+GL K  A EL  +G+RV+CVS  +G+A
Sbjct:  103 VSFVRCDVSVEDDVRRAVDWALSRHGGRLDVYCNNAGVLGRQTRAARSILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRRAGSIV-----SVASVAAVLG--GLGPHAYTASKHAIVGLTKNAACELRAHGVRVNCVS-PFGVA 241          
BLAST of FC871708 vs. ExPASy Swiss-Prot
Match: BACC2_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.035e-11
Identity = 44/135 (32.59%), Postives = 72/135 (53.33%), Query Frame = 2
Query:   14 YIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIPANYYGVSKFGILGLVKGLAAELGRYGIRVDCV 418
            ++H D+++E    N + + V KFG LD+L+N   N        I +   S+   +L VN  G FL++KHA + M+   +G I+ T   G      +  + +IPA  Y  SK G+L L + +A +  ++ IRV+CV
Sbjct:   56 FVHTDITDEPACQNAIRSAVDKFGGLDVLIN---NAGIEIVAPIHEMELSNWNKVLNVNLTGMFLMSKHALKYMLKSGKGNIINTCSVG-----GVVAWPDIPA--YNASKGGVLQLTRSMAVDYAKHNIRVNCV 180          
BLAST of FC871708 vs. ExPASy Swiss-Prot
Match: Y019_THEMA (Uncharacterized oxidoreductase TM_0019 OS=Thermotoga maritima GN=TM_0019 PE=3 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.708e-11
Identity = 44/140 (31.43%), Postives = 69/140 (49.29%), Query Frame = 2
Query:    5 DVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNTGCNLEYRGFVSILDTPKSDLEHLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACAEIEGFCNIP-ANYYGVSKFGILGLVKGLAAELGRYGIRVDCVS 421
            DV ++  DV++E  V N+V  TV  +G +D+LVN    +  +   SI + P  + E ++ VN  G ++ +++ A  M+ R  G I+    T          F + P    Y  SK G++ L   LA  L RY IRV  +S
Sbjct:   54 DVTFVKTDVADENSVKNMVRKTVEIYGGVDVLVNNAAVMSVK---SIFERPLEEWERVIRVNLTGPYICSRYCAEEMIKRGGGVIINIAST--------RAFQSEPDTEPYSASKGGLVALTHSLAVSLSRYHIRVVSIS 182          
The following BLAST results are available for this feature:
BLAST of FC871708 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
MOMAS_ORYSJ2.011e-2337.07Momilactone A synthase OS=Oryza sativa subsp. japo... [more]
ABA2_ARATH5.125e-1934.60Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN... [more]
TS2_MAIZE3.800e-1436.73Sex determination protein tasselseed-2 OS=Zea mays... [more]
BACC2_BACSU1.035e-1132.59Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
Y019_THEMA6.708e-1131.43Uncharacterized oxidoreductase TM_0019 OS=Thermoto... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAK3BA02FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK3BA02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871708 ID=FC871708; Name=FC871708; organism=Citrus sinensis; type=EST; length=720bp
CCAGGATGTCTGCTACATCCATTGTGATGTATCAAATGAAAGGGAAGTCA
TCAATCTTGTTGATACCACCGTTGCTAAATTCGGAAAGCTCGACATCCTG
GTCAATACCGGATGCAATCTTGAGTATCGTGGTTTCGTGAGCATTTTGGA
CACCCCAAAGTCTGATCTAGAACATTTACTGGCTGTGAACACAATTGGTG
GTTTCTTAGTAGCCAAGCATGCTGCAAGAGTCATGGTGCCACGCCGCAGA
GGTTGCATATTGTATACAACGGGTACGGGCACTACTGCTTGTGCGGAAAT
TGAAGGTTTCTGCAATATTCCAGCTAATTATTATGGAGTGTCAAAATTTG
GTATCTTGGGACTTGTCAAGGGCTTAGCGGCAGAGCTTGGACGGTATGGA
ATAAGAGTAGATTGCGTATCGCATACTTATGGCTTGGCAATGACTGAAGC
GATAGCATCAATAGCAAACGCTGCGCTTTACAATATGGCTAAAGATGATG
ATACAAGTTATGTGGGTAAGCAAAATCTTCTTGTCAATGGAGGATTCAGA
TGAGAGTTGTGAATCCTACCCTCTAAGAGAGCTTTCAATCGATGAAAAAA
ATTTCTGAGTTTTTTAGCTTCATTTTTCTCATATGTCAATTCAAAATTAT
GTGAGAATTGAATGATATAATTTTGTAACTCAATCTCTGTTTTTTTTTTT
AAAAAAAAAAAAAAAAAAAA
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