EY680358
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY680358 vs. ExPASy Swiss-Prot
Match: TRM13_SCHPO (tRNA guanosine-2'-O-methyltransferase trm13 OS=Schizosaccharomyces pombe GN=trm13 PE=2 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 8.728e-16 Identity = 49/137 (35.77%), Postives = 69/137 (50.36%), Query Frame = 3 Query: 9 QEKHVTQQASILGNLEEFGVLKNSVGVNQDDEKATPAVVEFGAGRGYLTQMLADGYGTKRVF-LVERKSYKLKADRSLRQKESLT-------IERLRIDIEDLDLSAVES-LRNV--PYLAIGKHLCGPATDLALRC 386 ++KH QQAS+LG++E+ N + EFGAGR L++ + + V+ L++R S + K D + K+S+ I R +IDI+DL L S RN P A KHLCG ATDL L C Sbjct: 153 KKKHAIQQASLLGHMEKLHYFDNQGSI----------YYEFGAGRAELSRYVQHCSQQENVYILIDRDSNRTKHDSRIL-KDSIKNNWPEPKIIRCKIDIKDLKLDFFASEFRNSGKPVFAYSKHLCGAATDLTLNC 278 HSP 2 Score: 42.3578 bits (98), Expect = 8.728e-16 Identity = 26/92 (28.26%), Postives = 49/92 (53.26%), Query Frame = 2 Query: 458 LATCCHHHCQWKHYTN--KKYMLNLGITK-EEFHAISWFTSWAVDADHGLNHLD-FTDSRMHLKSIEKKLGTGLPV-GIEDFVRNIKANERG 718 +A CCHHHC+W+ + ++ + + GI+ +EF + T WAV++ H DS + S E+++ GL I +++R ++ + G Sbjct: 289 IALCCHHHCRWRTLSTFAREQLSHWGISNPQEFQILRQMTGWAVNSLREHMHASGGADSHISGLSHEERVKIGLKCKHIINYMRKLECEKMG 380
BLAST of EY680358 vs. ExPASy Swiss-Prot
Match: TRM13_MOUSE (tRNA guanosine-2'-O-methyltransferase TRM13 homolog OS=Mus musculus GN=Ccdc76 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.991e-15 Identity = 60/136 (44.12%), Postives = 79/136 (58.09%), Query Frame = 3 Query: 15 KHVTQQASILGNLEEFGVLKNSVGVNQDDEKATPAVVEFGAGRGYLTQM----LADGYGTKRVFLVERKSYKLKADRSLRQKESLTIERLRIDIEDLDLSAVESLRN--VPYLAIGKHLCGPATDLALRCCLMEQY 404 KH+ QQASILGN+E+ +L VEFGAG+G L+ L D + LVER + + K D R+K+S+ ERL+IDI+ L L+ V LR +P + IGKHLCG ATD+ALR CL+E Y Sbjct: 162 KHLKQQASILGNIEKLKLLG-----------PRRCFVEFGAGKGKLSHWVDIALKDAENVHFI-LVERVTTRFKVDGKHRKKDSV-FERLQIDIQHLCLNRVPVLREGRLPVVGIGKHLCGVATDVALR-CLVETY 283
BLAST of EY680358 vs. ExPASy Swiss-Prot
Match: TRM13_DICDI (tRNA guanosine-2'-O-methyltransferase TRM13 homolog OS=Dictyostelium discoideum GN=trm13 PE=3 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 4.177e-15 Identity = 44/128 (34.38%), Postives = 65/128 (50.78%), Query Frame = 3 Query: 9 QEKHVTQQASILGNLEEFGVLKNSVGVNQDDEKATPAVVEFGAGRGYLTQMLADGYGTKRV-FLVERKSYKL--KADRSLRQKESLT-IERLRIDIEDLDLSAVESLRNVPYLAIGKHLCGPATDLAL 380 Q KH+ Q++SI+ LE NS N D+ +EFGAG G L+ + + K L++R ++ K DR ++ ++ RL IDI L+LS + L P++ KHLCG ATD L Sbjct: 247 QLKHIQQESSIINLLE------NSNLYNSDN-----VYLEFGAGSGKLSNHIFMSHEKKSGHILIDRMKFRSLKKVDRLIKNEKGCHHFSRLLIDIRHLNLSNLSILEEKPFVITSKHLCGCATDFTL 363 HSP 2 Score: 44.669 bits (104), Expect = 4.177e-15 Identity = 21/52 (40.38%), Postives = 31/52 (59.62%), Query Frame = 2 Query: 458 LATCCHHHCQWKHYTNKKYMLN-LGITKEEFHAISWFTSWAVDADHGLNHLD 610 +ATCCHH C + Y+N+ Y+ + L IT EF I +SWA ++ N+ D Sbjct: 386 IATCCHHICNFNTYSNQSYLKDQLNITPLEFQLICSISSWATIDENKCNNDD 437
BLAST of EY680358 vs. ExPASy Swiss-Prot
Match: TRM13_HUMAN (tRNA guanosine-2'-O-methyltransferase TRM13 homolog OS=Homo sapiens GN=CCDC76 PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 9.883e-15 Identity = 59/136 (43.38%), Postives = 77/136 (56.62%), Query Frame = 3 Query: 15 KHVTQQASILGNLEEFGVLKNSVGVNQDDEKATPAVVEFGAGRGYLTQM----LADGYGTKRVFLVERKSYKLKADRSLRQKESLTIERLRIDIEDLDLSAVESLRN--VPYLAIGKHLCGPATDLALRCCLMEQY 404 KH+ QQASILGN+E +L VEFGAG+G L+ L D + LVE+ + + K D R+K S+ ERL+IDI+ L L+ + LR +P + IGKHLCG ATDLALR CL+E Y Sbjct: 162 KHLKQQASILGNIENLKLLG-----------PRRCFVEFGAGKGKLSHWVDIALKDAEKVHFI-LVEKVTTRFKVDGKHRKKNSV-FERLQIDIQHLCLNKIPVLREEKLPVVGIGKHLCGMATDLALR-CLVETY 283
BLAST of EY680358 vs. ExPASy Swiss-Prot
Match: TRM13_YEAST (tRNA guanosine-2'-O-methyltransferase TRM13 OS=Saccharomyces cerevisiae GN=TRM13 PE=1 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 2.231e-12 Identity = 47/160 (29.38%), Postives = 74/160 (46.25%), Query Frame = 3 Query: 3 PFQEKHVTQQASILGNLEEFGVLKNSVGVNQDDEKATPAVVEFGAGRG---------YLTQMLA-----DGYGTKRVFLVERKSYKLKADRSLRQKESL-------------TIERLRIDIEDLDLSAVESLRNVP-----YLAIGKHLCGPATDLALRC 386 P KH QQ+S++ NL + G + +N +EFG GR LTQ+ + G + L++R + ++K D+ ++ S +I+R++IDI DL + + L++ P Y+ I KHLCG ATDL LRC Sbjct: 172 PSNTKHAVQQSSLIENLVDAGAFERPESLN---------FIEFGCGRAEFSRYVSLYLLTQLTSLPAEHSGSNSNEFVLIDRATNRMKFDKKIKDDFSEIKSNSPSKPISCPSIKRIKIDIRDLKMDPI--LKSTPGDDIQYVCISKHLCGVATDLTLRC 320 HSP 2 Score: 28.8758 bits (63), Expect = 2.231e-12 Identity = 9/23 (39.13%), Postives = 14/23 (60.87%), Query Frame = 2 Query: 458 LATCCHHHCQWKHYTNKKYMLNL 526 +A CC H C + Y N+ Y+ +L Sbjct: 344 IAMCCRHVCDYGDYVNRSYVTSL 366 The following BLAST results are available for this feature:
BLAST of EY680358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY680358 ID=EY680358; Name=EY680358; organism=Citrus sinensis; type=EST; length=835bpback to top |