EY728765

Overview
NameEY728765
Unique NameEY728765
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11780 contig Csv1_Contig11780:1..585. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
BLAST of EY728765 vs. ExPASy Swiss-Prot
Match: ECPD_ECOLI (Chaperone protein ecpD OS=Escherichia coli (strain K12) GN=ecpD PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 1.770e-15
Identity = 51/152 (33.55%), Postives = 84/152 (55.26%), Query Frame = -3
Query:  161 DAGQHHVLRVLY-AGEGLPGDRESLFWLNVMEIPLKPE-----SPDSMQFAVRQRLKLFYRPAGLEGGSAQAVQQLA--WSSPDGH-SIAVTNQSAFHLSLVNLQIDSGGPAHALDDYLLLKPGER--KVLDTTAPINAGTRIHFTEITDIG 583
            DA +   ++++Y A   LP DRES+FW NV+E+P KP+     +   +Q A R R+KLFYRP GL+G  ++A   L   WS  +G  S+ VTN + +++S  +  +++ G  + +D  ++    +   KV       N+  ++HF  I D G
Sbjct:   87 DAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPDAEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDVKMIAPFSDEVMKVNGLNGKANS-AKVHFYAINDFG 237          
BLAST of EY728765 vs. ExPASy Swiss-Prot
Match: FIMC_SALTY (Chaperone protein fimC OS=Salmonella typhimurium GN=fimC PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.019e-15
Identity = 49/140 (35.00%), Postives = 75/140 (53.57%), Query Frame = -3
Query:  161 HVLRVLYAGEGLPGDRESLFWLNVMEIPLKP----ESPDSMQFAVRQRLKLFYRPAGLEGGSAQAVQQLAWSSPDGHSIAVTNQSAFHLSLVNLQIDSGGPAHALDDYLLLKPGERKVLDTTAPINAGTRIHFTEITDIG 568
            + LR++YAG+ LPGDRESLFW+NV  IP       E  + +Q A+  R+KLF RPA L      A   L +S    H + +TN SA++L+LVN+ +     A  +D+ ++    + ++     P  A   + F  + D G
Sbjct:   88 NTLRIIYAGQPLPGDRESLFWMNVKAIPSVDKSHIEGKNVLQLAILSRIKLFVRPANLPQTPEDAPTLLKFSRVGNH-LKITNPSAYYLTLVNISVG----AKKIDNVMIAPKSDMQI---PLPTGAQGNVTFQSVNDYG 219          
BLAST of EY728765 vs. ExPASy Swiss-Prot
Match: LPFB_SALTY (Chaperone protein lpfB OS=Salmonella typhimurium GN=lpfB PE=3 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 5.149e-15
Identity = 42/91 (46.15%), Postives = 60/91 (65.93%), Query Frame = -3
Query:  311 QHHVLRVLYAGEGLPGDRESLFWLNVMEIPLKPESPDS---MQFAVRQRLKLFYRPAGLEGGSAQAVQQLAWSSPDGHSIAVTNQSAFHLS 574
            +++VLR++     LP DRES++W+NV  IP K E  ++   +Q AVR RLKLFYRPAGL+G S     +L ++S   + I V N SAF+L+
Sbjct:   85 KNNVLRIVNTTNTLPQDRESVYWINVKAIPAKSEDAEAKNVLQIAVRTRLKLFYRPAGLKGNSMDGWNKLQFTSAGANQIKVENPSAFNLT 175          
BLAST of EY728765 vs. ExPASy Swiss-Prot
Match: FIMB_BORPE (Chaperone protein fimB/fhaD OS=Bordetella pertussis GN=fimB PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.656e-13
Identity = 44/121 (36.36%), Postives = 63/121 (52.07%), Query Frame = -3
Query:  242 DAGQHHVLRVLYAG----EGLPGDRESLFWLNVMEIPLKP---ESPDSMQFAVRQRLKLFYRPAGLEGGSAQAVQQLAWSSPDGHSIAVTNQSAFHLSLVNLQIDSGGPAHALDDYLLLKP 583
            D G+   LR+ + G    + LP DRES+FWLNV+E+P K    E    +Q  +R RLKLFYRP GL G    A   L +       + V N + ++++L  L++   G AH      +L P
Sbjct:   89 DPGKGQTLRIFFNGYPDGKTLPSDRESVFWLNVLEVPPKATPEEGHGVLQLTIRSRLKLFYRPKGLSGNPLTAAADLTFKRKPNGVLEVHNPTPYYVNLQKLEVGENG-AHGSKTPWMLAP 208          
BLAST of EY728765 vs. ExPASy Swiss-Prot
Match: YRAI_ECOLI (Uncharacterized fimbrial chaperone yraI OS=Escherichia coli (strain K12) GN=yraI PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.124e-12
Identity = 44/145 (30.34%), Postives = 73/145 (50.34%), Query Frame = -3
Query:  161 DAGQHHVLRVLYAGEGLPGDRESLFWLNVMEIPLKPESPD----SMQFAVRQRLKLFYRPAGLEGGSAQAVQQLAWSSPDGHSIAVTNQSAFHLSLVNLQIDSGGPAHALDDYLLLKPGERKVLDTTAPINAGTRIHFTEITDIG 583
            +AG    LR++   + LP ++ESLF++NV  IP K +S D     +    + R+K+FYRPA L+G    A + L +   D HS+ + N + +++    L +D       ++    + PGE K L    P + G  + +  I D G
Sbjct:   82 EAGDDSSLRIIKTADNLPENKESLFYINVRAIPAKKKSDDVNANELTLVFKTRIKMFYRPAHLKGRVNDAWKSLEFKRSD-HSLNIYNPTEYYVVFAGLAVDKTDLTSKIE---YIAPGEHKQL--PLPASGGKNVKWAAINDYG 220          
BLAST of EY728765 vs. ExPASy Swiss-Prot
Match: HIFB2_HAEIN (Chaperone protein hifB OS=Haemophilus influenzae GN=hifB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.328e-12
Identity = 46/142 (32.39%), Postives = 82/142 (57.75%), Query Frame = -3
Query:  161 LRVLYAG-EGLPGDRESLFWLNVMEIPLKPESP------DSMQFAVRQRLKLFYRPAGLEGGSAQAVQQLAW-SSPDGHSIAVTNQSAFHLSLVNLQIDSGGPAHALDDYLLLKPGERKVLDTTAPINAGTRIHFTEITDIG 562
            LR+ + G E LP DRESLF+ N+++IP KP++         MQ A+R RLKLFYRPA L   S  A++++ + ++P+G  + V NQ+ ++++ + L +    PA    +  ++ P  + V +    + +G ++ +  + D G
Sbjct:   97 LRITFTGSEPLPDDRESLFYFNLLDIPPKPDAAFLAKHGSFMQIAIRSRLKLFYRPAKLSMDSRDAMKKVVFKATPEG--VLVDNQTPYYMNYIGL-LHQNKPA---KNVKMVAPFSQAVFEAKG-VRSGDKLKWVLVNDYG 231          
BLAST of EY728765 vs. ExPASy Swiss-Prot
Match: SFMC_ECOLI (Chaperone protein sfmC OS=Escherichia coli (strain K12) GN=sfmC PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.187e-11
Identity = 41/98 (41.84%), Postives = 59/98 (60.20%), Query Frame = -3
Query:  287 HVLRVLYAGEGLPGDRESLFWLNVMEIPLKPESP----DSMQFAVRQRLKLFYRPAGLEGGSAQAVQQLAWSSPDGHSIAVTNQSAFHLSLVNLQIDS 568
            + LR++Y G  L  DRESLFW+NV  IP   ++     + +Q A+  R+KLF RP  L+   A+A   L +S   G+ I V N S F+++LVNLQ+ S
Sbjct:   88 NTLRIIYTGPPLAADRESLFWMNVKTIPSVDKNALNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSR-SGNYINVHNPSPFYVTLVNLQVGS 184          
BLAST of EY728765 vs. ExPASy Swiss-Prot
Match: MRKB_KLEPN (Chaperone protein mrkB OS=Klebsiella pneumoniae GN=mrkB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.187e-11
Identity = 46/157 (29.30%), Postives = 82/157 (52.23%), Query Frame = -3
Query:  131 DAGQHHVLRV-LYAGEGLPGDRESLFWLNVMEIP-----LKPESPDSMQFAVRQRLKLFYRPAGLEGGSAQAVQQLAWSSPDGHSIAVTNQSAFHLSLVNLQIDSGGPAHALDDYLLLKPGERKVLDTTAPINAGTRIHFTEITDIGLQARHSAALK 583
            DA     LR+ L +  GL  D+E+L+WLN++EIP      K E  + +Q A+R R K  YRPAGL G    A ++LA S+ +G S++V+N + F++++  +  + G   ++    ++  P   + +  ++ ++ G  +    I D G        +K
Sbjct:   81 DAKSGQTLRIKLGSNAGLAKDKETLWWLNLLEIPPVEASQKNEGQNILQLAIRSRFKFIYRPAGL-GNRDAAAEKLALSA-NGSSLSVSNPTPFYITVSRISRNGGKALNS--KTVMFAPQSSQTIALSSAVSKGETLTVNNINDYGADVAVKVTVK 233          
BLAST of EY728765 vs. ExPASy Swiss-Prot
Match: HIFB1_HAEIN (Chaperone protein hifB OS=Haemophilus influenzae GN=hifB PE=3 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 7.694e-11
Identity = 45/142 (31.69%), Postives = 80/142 (56.34%), Query Frame = -3
Query:  161 LRVLYAG-EGLPGDRESLFWLNVMEIPLKPESP------DSMQFAVRQRLKLFYRPAGLEGGSAQAVQQLAW-SSPDGHSIAVTNQSAFHLSLVNLQIDSGGPAHALDDYLLLKPGERKVLDTTAPINAGTRIHFTEITDIG 562
            LR+ + G E LP DRESLF+ N+++IP KP++         MQ A+R RLKLFYRPA L      A++++ + ++P G  + V NQ+ ++++ + L +    PA    +  ++ P  + V +    + +G ++ +  + D G
Sbjct:   97 LRITFTGGEPLPDDRESLFYFNLLDIPPKPDAEFLAKHGSFMQIAIRSRLKLFYRPAKLSLDPFDAMKKVVFKATPKG--VLVDNQTPYYMNYIGL-LHQNKPA---KNVKMVAPFSQAVFEAKG-VRSGDKLKWVLVNDYG 231          
The following BLAST results are available for this feature:
BLAST of EY728765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
ECPD_ECOLI1.770e-1533.55Chaperone protein ecpD OS=Escherichia coli (strain... [more]
FIMC_SALTY3.019e-1535.00Chaperone protein fimC OS=Salmonella typhimurium G... [more]
LPFB_SALTY5.149e-1546.15Chaperone protein lpfB OS=Salmonella typhimurium G... [more]
FIMB_BORPE1.656e-1336.36Chaperone protein fimB/fhaD OS=Bordetella pertussi... [more]
YRAI_ECOLI3.124e-1230.34Uncharacterized fimbrial chaperone yraI OS=Escheri... [more]
HIFB2_HAEIN5.328e-1232.39Chaperone protein hifB OS=Haemophilus influenzae G... [more]
SFMC_ECOLI1.187e-1141.84Chaperone protein sfmC OS=Escherichia coli (strain... [more]
MRKB_KLEPN1.187e-1129.30Chaperone protein mrkB OS=Klebsiella pneumoniae GN... [more]
HIFB1_HAEIN7.694e-1131.69Chaperone protein hifB OS=Haemophilus influenzae G... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-008-C08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728765 ID=EY728765; Name=EY728765; organism=Citrus sinensis; type=EST; length=585bp
GTCGATCCGCTGCCGTCTTCCCGGCAGGCCAGCGCATAACTGGTGGCGGG
GAGGGCGGCGCAAGTGCACAGGGCGGCCAGTAGCAGGTGTTTAACGTGTG
GCATGGGTCGGTGTTCCCCGCGATATATCACTTGAGGGCTGCGCTATGGC
GCGCCTGCAAGCCGATATCGGTGATTTCGGTAAAGTGGATTCGCGTCCCG
GCGTTGATGGGCGCCGTAGTGTCGAGGACCTTGCGTTCCCCGGGCTTGAG
CAGCAGGTAGTCGTCCAGCGCGTGAGCCGGGCCGCCGGAGTCAATTTGCA
GGTTCACCAGGGACAGGTGAAAGGCACTCTGATTGGTCACGGCAATGGAG
TGCCCGTCGGGGCTGCTCCATGCCAGTTGCTGCACGGCTTGTGCCGAGCC
GCCCTCAAGCCCTGCCGGGCGATAGAACAGCTTGAGGCGCTGGCGCACGG
CAAACTGCATGCTGTCGGGGCTTTCCGGCTTCAGCGGGATTTCCATGACG
TTGAGCCAGAACAGCGACTCCCTATCACCGGGCAACCCTTCACCGGCATA
CAGGACCCGCAGCACGTGATGTTGCCCGGCATCCA
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