EY678188
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY678188 vs. ExPASy Swiss-Prot
Match: PSAD_NICSY (Photosystem I reaction center subunit II, chloroplastic OS=Nicotiana sylvestris GN=psaD PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.663e-54 Identity = 123/207 (59.42%), Postives = 141/207 (68.12%), Query Frame = 3 Query: 3 MAATTQASLFAPANFSTTTSSAPWKQS-SSFSVRPLKHNAPRTNTIKAMAEGKTETPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLAEAG*ERAVLGSGDKAEVQVQN*VPVLPRVSHGEVQNLHPKDGVYPEKSETLKGKELGQNYRSIWKEWESQFKAKFYGKTEYE 620 MA TQASLF PA S SSAPWKQS +SFS + LK I+AMAE + T EAPVGFTPP+LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREG NL + + L G + + + +GEVQ LHPKDGVYPEK + + +GQN+RSI K +S + KF GK Y+ Sbjct: 1 MAMATQASLFTPA-LSAPKSSAPWKQSLASFSPKQLKSTVSAPRPIRAMAE-EAATKEAEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGANLLKLARKEQCLALGTRLRSKYKINYRFYRVFPNGEVQYLHPKDGVYPEKVNAGR-QGVGQNFRSIGKN-KSPIEVKFTGKQVYD 203
BLAST of EY678188 vs. ExPASy Swiss-Prot
Match: PSAD_SOLLC (Photosystem I reaction center subunit II, chloroplastic OS=Solanum lycopersicum GN=psaD PE=2 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 1.192e-52 Identity = 121/210 (57.62%), Postives = 140/210 (66.67%), Query Frame = 3 Query: 3 MAATTQASLFAPANFSTTTSSAPWKQSS-SFSV-RPLKHNAPRTNTIKAMAE-GKTETPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLAEAG*ERAVLGSGDKAEVQVQN*VPVLPRVSHGEVQNLHPKDGVYPEKSETLKGKE-LGQNYRSIWKEWESQFKAKFYGKTEYE 620 MA TQASLF P +++APWKQS SFS + LK T I+AMAE T K AP GFTPP+LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR+GPNL + + L G + + + +GEVQ LHPKDGVYPEK G+E +GQN+RSI K +S + KF GK Y+ Sbjct: 1 MAMATQASLFTPPLSVPKSTTAPWKQSLVSFSTPKQLKSTVSVTRPIRAMAEEAPAATEEKPAPAGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLARKEQCLALGTRLRSKYKINYQFYRVFPNGEVQYLHPKDGVYPEKVN--PGREGVGQNFRSIGKN-KSAIEVKFTGKQVYD 207
BLAST of EY678188 vs. ExPASy Swiss-Prot
Match: PSAD_CUCSA (Photosystem I reaction center subunit II, chloroplastic OS=Cucumis sativus GN=psaD PE=1 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 2.104e-49 Identity = 116/212 (54.72%), Postives = 138/212 (65.09%), Query Frame = 3 Query: 3 MAATTQASLFAPANFS--TTTSSAPWKQSSSFSV---RPLKHNAPRTNTIKAMAEGKTETPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLAEAG*ERAVLGSGDKAEVQVQN*VPVLPRVSHGEVQNLHPKDGVYPEKSETLKGKE-LGQNYRSIWKEWESQFKAKFYGKTEYE 620 MA TQA+LF P+ + +T S PWKQSS+ S +P A + + K AE +T EAP GF+PPELDP+TPSPIF GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNL + + L G + + + +GEVQ LHPKDGVYPEK G+E +GQN+RSI K S + KF GK Y+ Sbjct: 1 MAMATQATLFTPSLSTPKSTGISIPWKQSSTLSFLTSKPHLKAASSSRSFKVSAEAETSV---EAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVN--PGREGVGQNFRSIGKN-VSPIEVKFTGKQVYD 206
BLAST of EY678188 vs. ExPASy Swiss-Prot
Match: PSAD_SPIOL (Photosystem I reaction center subunit II, chloroplastic OS=Spinacia oleracea GN=psaD PE=1 SV=2) HSP 1 Score: 191.045 bits (484), Expect = 8.840e-48 Identity = 117/216 (54.17%), Postives = 140/216 (64.81%), Query Frame = 3 Query: 3 MAATTQASLFAPANFST-----TTSSAPWKQSSS--FSVRPL-KHNAPRTNTIKAMAEGKTE--TPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLAEAG*ERAVLGSGDKAEVQVQN*VPVLPRVSHGEVQNLHPKDGVYPEKSETLKGKELGQNYRSIWKEWESQFKAKFYGKTEYE 620 MA TQA+LF+P++ S+ T + +KQ S+ F+ +P +H++ R A AEGK T TKEAP GFTPPELDPNTPSPIF GSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNL + + L G + + + GEVQ LHPKDGVYPEK + + +G N RSI K S + KF GK Y+ Sbjct: 1 MAMATQATLFSPSSLSSAKPIDTRLTTSFKQPSAVTFASKPASRHHSIRA---AAAAEGKAAAATETKEAPKGFTPPELDPNTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPSGEVQYLHPKDGVYPEKVNPGR-QGVGLNMRSIGKN-VSPIEVKFTGKQPYD 211
BLAST of EY678188 vs. ExPASy Swiss-Prot
Match: PSAD2_ARATH (Photosystem I reaction center subunit II-2, chloroplastic OS=Arabidopsis thaliana GN=psaD2 PE=1 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.667e-46 Identity = 111/206 (53.88%), Postives = 130/206 (63.11%), Query Frame = 3 Query: 9 ATTQASLFAPANFSTTTSSAPWKQSSSFSVRPLKHNAPRTNTIKAMAEGKTETPT-KEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLAEAG*ERAVLGSGDKAEVQVQN*VPVLPRVSHGEVQNLHPKDGVYPEKSETLKGKE-LGQNYRSIWKEWESQFKAKFYGKTEYE 620 AT A +F+PA +TTTS+ S S RP + +T E + P KEAPVGFTPP+LDPNTPSPIF GSTGGLLRKAQVEEFYVITW SPKEQIFEMPTGGAAIMREGPNL + + L G + + + +GEVQ LHPKDGVYPEK+ G+E +G N RSI K S + KF GK Y+ Sbjct: 2 ATQAAGIFSPA-ITTTTSAVKKLHLFSSSHRPKSLSFTKTAIRAEKTESSSAAPAVKEAPVGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWNSPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKITYQFYRVFPNGEVQYLHPKDGVYPEKAN--PGREGVGLNMRSIGKN-VSPIEVKFTGKQSYD 203
BLAST of EY678188 vs. ExPASy Swiss-Prot
Match: PSAD1_ARATH (Photosystem I reaction center subunit II-1, chloroplastic OS=Arabidopsis thaliana GN=psaD1 PE=1 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 2.662e-44 Identity = 108/209 (51.67%), Postives = 124/209 (59.33%), Query Frame = 3 Query: 9 ATTQASLFAPANFSTTTSSAPWKQSSSFSVRP----LKHNAPRTNTIKAMAEGKTETPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLAEAG*ERAVLGSGDKAEVQVQN*VPVLPRVSHGEVQNLHPKDGVYPEKSETLKGKE-LGQNYRSIWKEWESQFKAKFYGKTEYE 620 AT A +F A + TS S + RP A R + A TKEAPVGFTPP+LDPNTPSPIF GSTGGLLRKAQVEEFYVITW SPKEQIFEMPTGGAAIMREGPNL + + L G + + + +GEVQ LHPKDGVYPEK+ G+E +G N RSI K S + KF GK Y+ Sbjct: 2 ATQAAGIFNSAITTAATSGVKKLHFFSTTHRPKSLSFTKTAIRAEKTDSSAAAAAAPATKEAPVGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWNSPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKITYQFYRVFPNGEVQYLHPKDGVYPEKAN--PGREGVGLNMRSIGKN-VSPIEVKFTGKQSYD 207
BLAST of EY678188 vs. ExPASy Swiss-Prot
Match: PSAD_HORVU (Photosystem I reaction center subunit II, chloroplastic OS=Hordeum vulgare GN=psaD PE=1 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 9.467e-42 Identity = 105/213 (49.30%), Postives = 126/213 (59.15%), Query Frame = 3 Query: 3 MAATTQASL----FAPANFSTTTSSAPWKQSSSFSVR---PLKHNAPRTNTIKAMAEGKTETPTKEAPVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLAEAG*ERAVLGSGDKAEVQVQN*VPVLPRVSHGEVQNLHPKDGVYPEKSETLKGKELGQNYRSIWKEWESQFKAKFYGKTEYE 620 MA TQAS A +S + P + S R PL AP T A P + AP GF PP+LDP+TPSPIFGGSTGGLLRKAQVEEFYVITW SPKEQ+FEMPTGGAAIMREGPNL + + L G++ + + +GEVQ LHPKDGVYPEK + + +GQN+RSI K S + KF GK ++ Sbjct: 1 MAMATQASAATRHLITAAWSPSAKPRPATLAMPSSARGPAPLFAAAPDTPAPAA-------PPAEPAPAGFVPPQLDPSTPSPIFGGSTGGLLRKAQVEEFYVITWTSPKEQVFEMPTGGAAIMREGPNLLKLARKEQCLALGNRLRSKYKIAYQFYRVFPNGEVQYLHPKDGVYPEKVNAGR-QGVGQNFRSIGKN-VSPIEVKFTGKNSFD 204
BLAST of EY678188 vs. ExPASy Swiss-Prot
Match: PSAD_CHLRE (Photosystem I reaction center subunit II, chloroplastic OS=Chlamydomonas reinhardtii GN=psaD PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 4.408e-31 Identity = 91/190 (47.89%), Postives = 112/190 (58.95%), Query Frame = 3 Query: 54 TTSSAPWKQSSSFSVRPLKHNAPRTNTIKAMAEGKTETPTKEAPV-GFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLAEAG*ERAVLGSGDKAEVQVQN*VPVLP---RV-SHGEVQNLHPKDGVYPEKSETLKGKELGQNYRSIWKEWESQFKAKFYGK 608 T + A + SS +V + A R ++A AE K A +T P L+P+TPSPIFGGSTGGLLRKAQ EEFYVITWE+ KEQIFEMPTGGAAIMR+GPNL + G + L Q++N + P RV G+VQ LHP DGVYPEK + QN R I + + K KF G+ Sbjct: 7 TQAPAATRASSRVAVAA-RPAARRAVVVRAEAEAAPAAAKKAAEKPAWTVPTLNPDTPSPIFGGSTGGLLRKAQTEEFYVITWEAKKEQIFEMPTGGAAIMRQGPNLLKFGKKEQCLA----LTTQLRNKFKLTPCFYRVFPDGKVQYLHPADGVYPEKVNAGR-VGANQNMRRIGQN-VNPIKVKFSGR 189
BLAST of EY678188 vs. ExPASy Swiss-Prot
Match: PSAD_CYAPA (Photosystem I reaction center subunit II, cyanelle OS=Cyanophora paradoxa GN=psaD PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 7.282e-26 Identity = 83/205 (40.49%), Postives = 105/205 (51.22%), Query Frame = 3 Query: 48 STTTSSAPWKQSSSF------SVRPLKHNAPRTNTIKAMAEGKTETPTKE----APVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLAEAG*ERAVLGSG----DKAEVQVQN*VPVLPRVSHGEVQNLHPKDGVYPEKSETLKGKELGQNYRSIWKEWESQFKAKFYGKTEYE 620 S T SSA Q +F + + AP ++A E E AP F+ P L+ N P+PIFGGSTGGLLRKA+VEEFY ITW E +FE+PTGGAAIMR G NL + + G DK ++ V P GEVQ LHPKDGV+PEK + +G N R I + K KF G+ ++ Sbjct: 16 SATLSSAVCAQKKAFFGAQVAAKKTTFEAAPARFIVRAEEEEAAPAEKVEKKAAAPKPFSVPTLNLNAPTPIFGGSTGGLLRKAEVEEFYSITWTGKSETVFELPTGGAAIMRAGENLLRLARKEQCIALGAQLKDKFKITDYKIYRVYP---SGEVQFLHPKDGVFPEKVNPGR-VAVGSNKRRIGQN-PDPAKLKFKGQETFD 215
BLAST of EY678188 vs. ExPASy Swiss-Prot
Match: PSAD_ODOSI (Photosystem I reaction center subunit II OS=Odontella sinensis GN=psaD PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.518e-23 Identity = 68/144 (47.22%), Postives = 78/144 (54.17%), Query Frame = 3 Query: 207 LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLAEAG*ERAVLGSGDKAEVQVQN*VPVLPRVSHGEVQNLHPKDGVYPEK------SETLKGKELGQNYRSIWKEWESQFKAKFYGKTEYE 620 L+ TP P FGGSTGG LR A+VEE Y ITW S KEQIFEMPTGGAAIMR G NL + L G + N + GEVQ LHPKDGV+PEK S +G +G+N + KF G T YE Sbjct: 3 LNLQTPFPTFGGSTGGWLRAAEVEEKYAITWTSKKEQIFEMPTGGAAIMRNGENLLYLARKEQCLALGTQLRTFKINDYKIYRIFPSGEVQYLHPKDGVFPEKVNPGRTSVNSRGFSIGKN--------PNPASIKFSGITTYE 138 The following BLAST results are available for this feature:
BLAST of EY678188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >EY678188 ID=EY678188; Name=EY678188; organism=Citrus sinensis; type=EST; length=992bpback to top |