EY678181

Overview
NameEY678181
Unique NameEY678181
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1028
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY678181 vs. ExPASy Swiss-Prot
Match: MCFP_DICDI (Mitochondrial substrate carrier family protein P OS=Dictyostelium discoideum GN=mcfP PE=3 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 8.822e-12
Identity = 41/125 (32.80%), Postives = 66/125 (52.80%), Query Frame = 2
Query:   32 YRGWFPSVIGVVPHVGLNFAVYESLKVWLIKTKPLG-LAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLGSQF 403
            YRG  P++IG++P+ G++F+ +E LK    +  PL  + E+ ++S T +L              YP DV+RRR+Q  G+ +A +VV         LE+ G +      ++ EG  ALYKGL   +
Sbjct:  162 YRGIQPTLIGILPYGGISFSTFEFLK----RIAPLNEIDENGQISGTYKLIAGGIAGGVAQTVAYPFDVVRRRVQTHGFGDAKAVV--------NLEH-GTLRTIAHILKEEGILALYKGLSINY 273          

HSP 2 Score: 30.4166 bits (67), Expect = 8.822e-12
Identity = 13/26 (50.00%), Postives = 19/26 (73.08%), Query Frame = 3
Query:  384 RGLVPNSVKVVPSISLAFVTYEVVKD 461
            +GL  N VKV+P+ S+AF TYE + +
Sbjct:  267 KGLSINYVKVIPTASIAFYTYEYLSN 292          
BLAST of EY678181 vs. ExPASy Swiss-Prot
Match: ADT_KLULA (ADP,ATP carrier protein OS=Kluyveromyces lactis GN=AAC PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.305e-11
Identity = 44/127 (34.65%), Postives = 58/127 (45.67%), Query Frame = 2
Query:   32 YRGWFPSVIGVVPHVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLGSQFCEG 412
            YRG+ PSV+G+V + GL F +Y+SL       KPL L    E S                   YPLD +RRRM M   +               ++Y+G  DAFRK V  EG  +L+KG G+    G
Sbjct:  177 YRGFLPSVVGIVVYRGLYFGLYDSL-------KPLLLTGSLENSFLASFLLGWAVTTGASTASYPLDTVRRRMMMTSGQ--------------AVKYDGAFDAFRKIVAAEGIKSLFKGCGANILRG 282          
BLAST of EY678181 vs. ExPASy Swiss-Prot
Match: CMC3_CAEBR (Probable calcium-binding mitochondrial carrier CBG00135 OS=Caenorhabditis briggsae GN=CBG00135 PE=3 SV=1)

HSP 1 Score: 51.2174 bits (121), Expect = 9.057e-11
Identity = 33/124 (26.61%), Postives = 58/124 (46.77%), Query Frame = 2
Query:   32 YRGWFPSVIGVVPHVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLGSQF 403
            Y+G+ P+++G++P+ G++  VYE+LK    +       E +E  V   L              YPL ++R R+Q        +  I    +  P   + MI  F+  +++EGF  LY+G+   F
Sbjct:  398 YKGYLPNLLGIIPYAGIDLTVYETLKSCYTQY----YTEHTEPGVLALLACGTCSSTCGQLASYPLALVRTRLQ--------ARAISPKNSSQP---DTMIGQFKHILQNEGFTGLYRGITPNF 506          

HSP 2 Score: 36.965 bits (84), Expect = 9.057e-11
Identity = 14/29 (48.28%), Postives = 23/29 (79.31%), Query Frame = 3
Query:  384 RGLVPNSVKVVPSISLAFVTYEVVKDILG 470
            RG+ PN +KV+P++S+++V YE V+  LG
Sbjct:  500 RGITPNFMKVIPAVSISYVVYEKVRKQLG 528          
The following BLAST results are available for this feature:
BLAST of EY678181 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
MCFP_DICDI8.822e-1232.80Mitochondrial substrate carrier family protein P O... [more]
ADT_KLULA5.305e-1134.65ADP,ATP carrier protein OS=Kluyveromyces lactis GN... [more]
CMC3_CAEBR9.057e-1126.61Probable calcium-binding mitochondrial carrier CBG... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-045-C05-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY678181 ID=EY678181; Name=EY678181; organism=Citrus sinensis; type=EST; length=1028bp
CCACGCGTCCGAGAAGGCCCACGGGGCTCCCTATAGGGGCTGGTTTCCTT
CAGTAATTGGAGTTGTCCCCCACGTGGGTCTCAACTTTGCTGTGTATGAA
TCTTTAAAAGTTTGGTTAATCAAAACTAAGCCCCTTGGGTTAGCTGAAGA
TTCTGAGTTGAGTGTGACGACAAGACTAGCGTGTGGAGCTGCTGCAGGAA
CAGTTGGCCAAACTGTTGCCTACCCTCTTGATGTTATACGCCGAAGAATG
CAGATGGTGGGTTGGAAAGAAGCTTCCTCTGTGGTCATTGGTGATGGGAG
AAACAGAGCTCCTCTTGAATATAATGGCATGATTGATGCATTCCGAAAAA
CTGTCCGGCACGAGGGGTTTGGAGCATTATACAAGGGGCTTGGTTCCCAA
TTCTGTGAAGGTTGTTCCATCCATATCACTAGCATTTGTGACTTATGAGG
TGGTGAAGGACATTTTAGGAGTTGAAATTAGAATATCAGACTGAAGTTTG
TGGAACTTTGACATTTGTTGGACAGAGGTGTTATTTTTGTANGGAAGGGG
TTGGGGAAAAGGTAAAGTAGGCATTCTTGCCTTTTGTCTTTCTTAGGGCC
AAGTCTAGATAACCCGTTTGGAACTTGGGGTTTATAATTCGCTTTTCTTT
TGTTTCCCCATCTAGGTTTCCCTGGGGAACATTCTGTAACCTTTTCAACT
TTCCTATTTATTGGTGCCGGGTCAATAATTTTTGCCAAAAAGGAAAAAAC
CCAAAAAATAACCAAATTTTTTGAATTCCCTTTCCTATTAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAGGGGGGGGCCCCCCTAAAAAGGAA
ATCACAACATTATACATAGCACGGTGGATTGTGAGAAAACTAATAACACT
CTTTCTTAAAGAGGGGGCGCACCCAACAAAATTTTAGACTTTTCCCTCGG
GGGCGCCCGCTTTATTTTTTATCAAATACGGCGTGAGGGCGGTGTGGGGC
GAGAAAAAAAACTCCCCGGTGGGGGCGC
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