EY678177
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY678177 vs. ExPASy Swiss-Prot
Match: GLNA2_DAUCA (Glutamine synthetase, chloroplastic OS=Daucus carota GN=GLN2 PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 2.389e-39 Identity = 78/104 (75.00%), Postives = 89/104 (85.58%), Query Frame = 3 Query: 57 LAQILAPSMQWQMRMPKYSNIASPMTTKMWSSLLMKQNKKGTNRSSAKFRVLALKSEDSTVNRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPV 368 +AQILAPS+QWQMR K S S MT+KMW SL +KQNKK RSS K+R LA+KSED T+NR+EDLLNLD+TPYTDKIIAEYIWIGGTGID+RSKS+TISKPV Sbjct: 1 MAQILAPSVQWQMRFTKNSTEVSSMTSKMWGSLFLKQNKKAPARSSTKYRALAVKSEDGTINRMEDLLNLDVTPYTDKIIAEYIWIGGTGIDVRSKSRTISKPV 104 HSP 2 Score: 69.3218 bits (168), Expect = 4.695e-11 Identity = 39/80 (48.75%), Postives = 44/80 (55.00%), Query Frame = 1 Query: 325 GLICVASQRPFQSLFEHPSELPKWNYDGSSTGQAPGEDSEIIXXXXXXXXXXXXWKKQPPW*FCDT*PTSQGNPLPTNKR 564 G+ + R EHPSELPKWNYDGSSTGQAPG+DSE+I CDT T QG P+PTNKR Sbjct: 90 GIDVRSKSRTISKPVEHPSELPKWNYDGSSTGQAPGDDSEVILYPQAIFKDPFRGGNN-ILVICDT-YTPQGEPIPTNKR 167
BLAST of EY678177 vs. ExPASy Swiss-Prot
Match: GLNA4_PHAVU (Glutamine synthetase leaf isozyme, chloroplastic OS=Phaseolus vulgaris PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 1.004e-37 Identity = 81/104 (77.88%), Postives = 90/104 (86.54%), Query Frame = 3 Query: 57 LAQILAPSMQWQMRMPKYSNIASPMTTKMWSSLLMKQNKKGTNRSSAKFRVLALKSEDSTVNRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPV 368 +AQILAPS QWQMR K S ASP+T+ WSSLLMKQNKK SSAKFRVLA+KS+ ST+NRLE LLNLDITP+TDKIIAEYIWIGGTGID+RSKS+TISKPV Sbjct: 1 MAQILAPSTQWQMRFTKSSRHASPITSNTWSSLLMKQNKK---TSSAKFRVLAVKSDGSTINRLEGLLNLDITPFTDKIIAEYIWIGGTGIDVRSKSRTISKPV 101
BLAST of EY678177 vs. ExPASy Swiss-Prot
Match: GLNA2_PEA (Glutamine synthetase leaf isozyme, chloroplastic OS=Pisum sativum GN=GS2 PE=2 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 8.497e-37 Identity = 102/226 (45.13%), Postives = 137/226 (60.62%), Query Frame = 3 Query: 57 LAQILAPSMQWQMRMPKYSNIASPMTTKMWSSLLMKQNKKGTNRSSAKFRVLALKSEDSTVNRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPV*ASI*ASQVEL*WIKYWTGTW*R**NNFITLKPFLRTPSLEETTSLVIL*YLTHQPGEPPPYKQTALGVVEFFENPKVAAKISWVLGKGEKIPLFSQKRGKVAPRVWAGLEPFPGAPRGPFF 734 +AQILAPS QWQMR+ K S A+P+T+KMWSSL+MKQ KK + SAKFRV+A+ SE+ T+NR+EDLLNLDITP+TD IIAEYIWIGGTGID+RSKS+TISKPV S + + + TG + I + +++++ GEP P + E F NPKV A+I W + E L + + P W + +PG P+GP++ Sbjct: 1 MAQILAPSTQWQMRITKTSPCATPITSKMWSSLVMKQTKKVAH--SAKFRVMAVNSENGTINRVEDLLNLDITPFTDSIIAEYIWIGGTGIDVRSKSRTISKPV--SHPSEVPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVVCDAYTPAGEPIPTNKRH-RAAEIFSNPKVEAEIPWYGIEQEYTLLQTNVKW---PLGWP-VGGYPG-PQGPYY 216
BLAST of EY678177 vs. ExPASy Swiss-Prot
Match: GLNA2_MEDSA (Glutamine synthetase leaf isozyme, chloroplastic OS=Medicago sativa GN=GS2 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.148e-33 Identity = 107/230 (46.52%), Postives = 136/230 (59.13%), Query Frame = 3 Query: 57 LAQILAPSMQWQMRMPKYSNIASPMTTKMWSSLLMKQNKKGTNRSSAKFRVLALKSEDSTVNRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPV*ASI*ASQVEL*WIKY---WTGTW*R**NNFITL-KPFLRTPSLEETTSLVIL*YLTHQPGEPPPYKQTALGVVEFFENPKVAAKISWVLGKGEKIPLFSQKRGKVAPRVWAGLEPFPGAPRGPFF 734 +AQILAPS+Q Q R+ K S +A+P+++KMWSSL+MKQNKK SAKFRV+A+ S T+NR+EDLLNLDITP+TD IIAEYIWIGGTGID+RSKS+TISKPV EL Y TG + I + + P LVI T Q GEP P + E F NPKV A+I W + E L + + P W + +PG P+GP++ Sbjct: 1 MAQILAPSIQCQTRITKTSPLATPISSKMWSSLVMKQNKKVAR--SAKFRVMAINS--GTINRVEDLLNLDITPFTDSIIAEYIWIGGTGIDVRSKSRTISKPV-----EHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDAYTPQ-GEPIPTNKRH-KAAEIFSNPKVEAEIPWYGIEQEYTLLQTDVKW---PLGWP-VGGYPG-PQGPYY 214
BLAST of EY678177 vs. ExPASy Swiss-Prot
Match: GLNA2_ARATH (Glutamine synthetase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=GLN2 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 4.993e-29 Identity = 91/229 (39.74%), Postives = 131/229 (57.21%), Query Frame = 3 Query: 57 LAQILAPSMQWQMRMPKYSNIASPMTTKMWSSLLMKQNKKGTNRSSAKFRVLALKSEDSTVNRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPV*ASI*ASQVEL*WIKY---WTGTW*R**NNFITLKPFLRTPSLEETTSLVIL*YLTHQPGEPPPYKQTALGVVEFFENPKVAAKISWVLGKGEKIPLFSQKRGKVAPRVWAGLEPFPGAPRGPFF 734 +AQILA S QMR+PK+S++ + ++K+WSS+++KQ K+ N+ FRVLAL+S++STVNR+E LLNLD PY+D+IIAEYIWIGG+GID+RSKS+TI KPV EL Y TG + I + +++++ GEP P + A E F N KV+ ++ W G ++ L Q P W + FPG P+GP++ Sbjct: 1 MAQILAASPTCQMRVPKHSSVIAS-SSKLWSSVVLKQKKQSNNKVRG-FRVLALQSDNSTVNRVETLLNLDTKPYSDRIIAEYIWIGGSGIDLRSKSRTIEKPV-----EDPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFRDPFRGGNNILVICDTWTPAGEPIPTNKRA-KAAEIFSNKKVSGEVPW-FGIEQEYTLLQQ--NVKWPLGWP-VGAFPG-PQGPYY 216
BLAST of EY678177 vs. ExPASy Swiss-Prot
Match: GLNAC_BRANA (Glutamine synthetase, chloroplastic OS=Brassica napus GN=GLN2 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 5.167e-26 Identity = 59/104 (56.73%), Postives = 86/104 (82.69%), Query Frame = 3 Query: 57 LAQILAPSMQWQMRMPKYSNIASPMTTKMWSSLLMKQNKKGTNRSSAKFRVLALKSEDSTVNRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPV 368 +AQILA S QMR+ K S+IAS +K+W+S+++KQ K+ +++ + F+V+AL+S++ST+NR+E LLNLD P+TD+IIAEYIWIGG+GID+RSKS+T+ KPV Sbjct: 1 MAQILAASPTCQMRLTKPSSIAS---SKLWNSVVLKQKKQSSSKVRS-FKVMALQSDNSTINRVESLLNLDTKPFTDRIIAEYIWIGGSGIDLRSKSRTLEKPV 100
BLAST of EY678177 vs. ExPASy Swiss-Prot
Match: GLNA1_MAIZE (Glutamine synthetase root isozyme 1 OS=Zea mays GN=GLN6 PE=2 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 1.284e-21 Identity = 27/41 (65.85%), Postives = 36/41 (87.80%), Query Frame = 3 Query: 246 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPV 368 L DL+NLD++ TD+IIAEYIWIGGTGID+RSK++T+ P+ Sbjct: 4 LTDLVNLDLSDCTDRIIAEYIWIGGTGIDLRSKARTVKGPI 44 HSP 2 Score: 60.8474 bits (146), Expect = 1.284e-21 Identity = 34/63 (53.97%), Postives = 37/63 (58.73%), Query Frame = 1 Query: 376 PSELPKWNYDGSSTGQAPGEDSEIIXXXXXXXXXXXXWKKQPPW*FCDT*PTSQGNPLPTNKR 564 P +LPKWNYDGSSTGQAPGEDSE+I K CD T QG P+PTNKR Sbjct: 47 PIQLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFR-KGNHILVMCDC-YTPQGEPIPTNKR 107
BLAST of EY678177 vs. ExPASy Swiss-Prot
Match: GLNA5_MAIZE (Glutamine synthetase root isozyme 5 OS=Zea mays GN=GS1-5 PE=2 SV=2) HSP 1 Score: 63.1586 bits (152), Expect = 1.284e-21 Identity = 26/41 (63.41%), Postives = 36/41 (87.80%), Query Frame = 3 Query: 246 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPV 368 L DL+NLD++ TDKIIAEYIW+GG+GID+RSK++T+ P+ Sbjct: 4 LTDLVNLDLSDCTDKIIAEYIWVGGSGIDLRSKARTVKGPI 44 HSP 2 Score: 61.6178 bits (148), Expect = 1.284e-21 Identity = 34/63 (53.97%), Postives = 38/63 (60.32%), Query Frame = 1 Query: 376 PSELPKWNYDGSSTGQAPGEDSEIIXXXXXXXXXXXXWKKQPPW*FCDT*PTSQGNPLPTNKR 564 PS+LPKWNYDGSSTGQAPGEDSE+I K CD T QG P+P+NKR Sbjct: 47 PSQLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFR-KGNNILVMCDC-YTPQGEPIPSNKR 107
BLAST of EY678177 vs. ExPASy Swiss-Prot
Match: GLNA3_LUPAN (Glutamine synthetase nodule isozyme (Fragment) OS=Lupinus angustifolius PE=2 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 8.121e-21 Identity = 25/41 (60.98%), Postives = 37/41 (90.24%), Query Frame = 3 Query: 246 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPV 368 L DL+NL+++ T+KIIAEYIW+GG+G+D+RSK++T+S PV Sbjct: 4 LSDLINLNLSDTTEKIIAEYIWVGGSGVDLRSKARTLSGPV 44 HSP 2 Score: 60.4622 bits (145), Expect = 8.121e-21 Identity = 33/63 (52.38%), Postives = 38/63 (60.32%), Query Frame = 1 Query: 376 PSELPKWNYDGSSTGQAPGEDSEIIXXXXXXXXXXXXWKKQPPW*FCDT*PTSQGNPLPTNKR 564 PS+LPKWNYDGSSTGQAPG+DSE+I + CDT T G P+PTNKR Sbjct: 47 PSKLPKWNYDGSSTGQAPGKDSEVILWPQAIFKDPFR-RGNNILVICDT-YTPSGKPIPTNKR 107
BLAST of EY678177 vs. ExPASy Swiss-Prot
Match: GLN14_ARATH (Glutamine synthetase cytosolic isozyme 1-4 OS=Arabidopsis thaliana GN=GLN1-4 PE=1 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 1.053e-20 Identity = 27/44 (61.36%), Postives = 38/44 (86.36%), Query Frame = 3 Query: 237 VNRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPV 368 ++ L DL+NLD++ TD+IIAEYIWIGG+G+DMRSK++T+ PV Sbjct: 1 MSSLADLINLDLSDSTDQIIAEYIWIGGSGLDMRSKARTLPGPV 44 HSP 2 Score: 58.9214 bits (141), Expect = 1.053e-20 Identity = 32/63 (50.79%), Postives = 37/63 (58.73%), Query Frame = 1 Query: 376 PSELPKWNYDGSSTGQAPGEDSEIIXXXXXXXXXXXXWKKQPPW*FCDT*PTSQGNPLPTNKR 564 PS+LPKWNYDGSSTGQAPG+DSE+I + CD T G P+PTNKR Sbjct: 47 PSQLPKWNYDGSSTGQAPGDDSEVIIYPQAIFKDPFR-RGNNILVMCDA-YTPAGEPIPTNKR 107 The following BLAST results are available for this feature:
BLAST of EY678177 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >EY678177 ID=EY678177; Name=EY678177; organism=Citrus sinensis; type=EST; length=1139bpback to top |