EY678099

Overview
NameEY678099
Unique NameEY678099
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1024
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY678099 vs. ExPASy Swiss-Prot
Match: G3PA_PEA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Pisum sativum GN=GAPA PE=2 SV=2)

HSP 1 Score: 229.95 bits (585), Expect = 1.790e-59
Identity = 131/206 (63.59%), Postives = 153/206 (74.27%), Query Frame = 2
Query:   20 MASATLSVAKSALQGNGKGFSEFSGLRNSAS-LPFGRKSSDDFHSVIALQTSALGSSSSGYRKVAAQAK-LKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTTWHL*SRC*TVGTDGISVDGKVIQVVSNRNPRQSPLGGTWAS---NLVIEGDRSVL*NKKGGGKPHFGRVAKKILFYTPPGRGKHP 622
            MASAT SVAK A++ NGKGFSEFSGLRNS+  LPF RKSSDDFHS++  QT+A+GSS    + +  +AK LKVAINGFGRIGRNFLRCWHGRKDSPL+V+AINDTGGVKQASHLLKYDST     +    VGTDGISVDGKVI+VVS+RNP   P    W     +LVIEG   V  +++G G+ H    AKK+L  T PG+G  P
Sbjct:    1 MASATFSVAKPAIKANGKGFSEFSGLRNSSRHLPFSRKSSDDFHSLVTFQTNAVGSSGGHKKSLVVEAKQLKVAINGFGRIGRNFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDSTLGIFDADVKPVGTDGISVDGKVIKVVSDRNPANLP----WKELGIDLVIEG-TGVFVDREGAGR-HITAGAKKVLI-TAPGKGDIP 199          
BLAST of EY678099 vs. ExPASy Swiss-Prot
Match: G3PA_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPA PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 5.960e-55
Identity = 120/191 (62.83%), Postives = 143/191 (74.87%), Query Frame = 2
Query:   50 SALQGNGKGFSEFSGLRNSASLPFGRKSSDDFHSVIALQTSALGSSSSGYRKVAAQAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTTWHL*SRC*TVGTDGISVDGKVIQVVSNRNPRQSPLGGTWASNLVIEGDRSVL*NKKGGGKPHFGRVAKKILFYTPPGRGKHP 622
            S+LQ + KGFSEFSGLR S+++PFGRK++DD  SV+A QTS +G  +S  ++   +AKLKVAINGFGRIGRNFLRCWHGRKDSPL+V+AINDTGGVKQASHLLKYDST     +    VGTDGISVDGKVIQVVS+RNP   P G     +LVIEG   V  +++G GK H    AKK+L  T PG+G  P
Sbjct:    2 SSLQVSNKGFSEFSGLRTSSAIPFGRKTNDDLLSVVAFQTSVIGGGNS--KRGVVEAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDSTLGIFDADVKPVGTDGISVDGKVIQVVSDRNPVNLPWGDL-GIDLVIEG-TGVFVDREGAGK-HIQAGAKKVLI-TAPGKGDIP 186          
BLAST of EY678099 vs. ExPASy Swiss-Prot
Match: G3PA_ARATH (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Arabidopsis thaliana GN=GAPA PE=1 SV=3)

HSP 1 Score: 203.756 bits (517), Expect = 1.374e-51
Identity = 123/206 (59.71%), Postives = 145/206 (70.39%), Query Frame = 2
Query:   20 MASATLSVAKSALQGNGKGFSEFSGLRNS-ASLPFGRK-SSDDFHSVIALQTSALGSSSSGYRKVAAQAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTTWHL*SRC*TVGTDGISVDGKVIQVVSNRNPRQSPLGGTWAS---NLVIEGDRSVL*NKKGGGKPHFGRVAKKILFYTPPGRGKHP 622
            MAS T SV K        GF+EFSGLR+S ASLPFG+K SSD+F S+++ QTSA+GSS  GYRK   +AKLKVAINGFGRIGRNFLRCWHGRKDSPL+++AINDTGGVKQASHLLKYDST     +     G   ISVDGK+IQVVSNRNP   P    W     ++VIEG   V  +++G GK H    AKK++  T PG+G  P
Sbjct:    1 MASVTFSVPK--------GFTEFSGLRSSSASLPFGKKLSSDEFVSIVSFQTSAMGSSG-GYRKGVTEAKLKVAINGFGRIGRNFLRCWHGRKDSPLDIIAINDTGGVKQASHLLKYDSTLGIFDADVKPSGETAISVDGKIIQVVSNRNPSLLP----WKELGIDIVIEG-TGVFVDREGAGK-HIEAGAKKVII-TAPGKGDIP 190          
BLAST of EY678099 vs. ExPASy Swiss-Prot
Match: G3PA_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Spinacia oleracea GN=GAPA PE=1 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 1.984e-50
Identity = 119/201 (59.20%), Postives = 137/201 (68.16%), Query Frame = 2
Query:   20 MASATLSVAKSALQGNGKGFSEFSGLRNSASLPFGRKSSDDFHSVIALQTSALGSSSSGYRKVAAQAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTTWHL*SRC*TVGTDGISVDGKVIQVVSNRNPRQSPLGGTWASNLVIEGDRSVL*NKKGGGKPHFGRVAKKILFYTPPGRGKHP 622
            MAS  LS+A  +L+   KGFSEFSGL  S SLPFGRK SDD  + ++ QT+A+G   S    V  +AKLKVAINGFGRIGRNFLRCWHGRKDSPL+VV INDTGGVKQASHLLKYDS      +   T G   ISVDGKVI+VVS+RNP   P  G    +LVIEG   V  ++ G GK H    AKK+L  T PG+G  P
Sbjct:    1 MASNMLSIANPSLRVYNKGFSEFSGLHTS-SLPFGRKGSDDLMAFVSFQTNAVGGKRSSQNGVV-EAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLP-WGDMGIDLVIEG-TGVFVDRDGAGK-HLQAGAKKVLI-TAPGKGDIP 195          
BLAST of EY678099 vs. ExPASy Swiss-Prot
Match: G3PA_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Zea mays GN=GAPA PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 5.403e-48
Identity = 119/203 (58.62%), Postives = 141/203 (69.46%), Query Frame = 2
Query:   20 MASATLSVAKSALQGNGKGFSEFSGLRNSASLPFGRKS-SDDFHSVIALQTSALGSSSSGYRKVAAQAKLKVAINGFGRIGRNFLRCWHGRKD-SPLEVVAINDTGGVKQASHLLKYDSTTWHL*SRC*TVGTDGISVDGKVIQVVSNRNPRQSPLGGTWASNLVIEGDRSVL*NKKGGGKPHFGRVAKKILFYTPPGRGKHP 622
            MAS+ LS     LQ  G G SEFSGLR+SASLP  R + SDDF S ++ +T A+G+S  G R+   +AKLKVAINGFGRIGRNFLRCWHGR D SPL+V+AINDTGGVKQASHLLKYDST     +    VG + ISVDGKVI+VVS+RNP   P  G    +LVIEG   V  +++G GK H    AKK+L  T PG+G  P
Sbjct:    1 MASSMLSATTVPLQQGG-GLSEFSGLRSSASLPMRRNATSDDFMSAVSFRTHAVGTSG-GPRRAPTEAKLKVAINGFGRIGRNFLRCWHGRGDASPLDVIAINDTGGVKQASHLLKYDSTLGIFDADVKPVGDNAISVDGKVIKVVSDRNPSNLP-WGELGIDLVIEG-TGVFVDREGAGK-HIQAGAKKVLI-TAPGKGDIP 197          
BLAST of EY678099 vs. ExPASy Swiss-Prot
Match: G3PB_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Spinacia oleracea GN=GAPB PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 4.016e-35
Identity = 91/181 (50.28%), Postives = 118/181 (65.19%), Query Frame = 2
Query:   80 SEFSGLRNSASLPFGRKSSDDFHSVIALQTSALGSSSSGYRKVAAQAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTTWHL*SRC*TVGTDGISVDGKVIQVVSNRNPRQSPLGGTWAS---NLVIEGDRSVL*NKKGGGKPHFGRVAKKILFYTPPGRG 613
            ++FSGLR+S S+ F R++S  FH VIA Q +   + ++  R     AKLKVAINGFGRIGRNFLRCWHGRKDSPL+VV +ND+GGVK A+HLLKYDS      +    +  +  S+DGK I+VVSNR+P + P    WA    ++VIEG   V  +  G GK H    AKK++  T P +G
Sbjct:   40 ADFSGLRSSNSVTFTREAS--FHDVIAAQLTTKPTGAAPVRGETV-AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKSATHLLKYDSILGTFKADVKIIDNETFSIDGKPIKVVSNRDPLKLP----WAELGIDIVIEG-TGVFVDGPGAGK-HIQAGAKKVII-TAPAKG 210          
BLAST of EY678099 vs. ExPASy Swiss-Prot
Match: G3PB_PEA (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Pisum sativum GN=GAPB PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 1.993e-34
Identity = 87/181 (48.07%), Postives = 118/181 (65.19%), Query Frame = 2
Query:   83 EFSGLRNSASLPFGRKSSDD-FHSVIALQTSALGSSSSGYRKVAAQAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTTWHL*SRC*TVGTDGISVDGKVIQVVSNRNPRQSPLGGTWAS---NLVIEGDRSVL*NKKGGGKPHFGRVAKKILFYTPPGRG 613
            EFSGL++++ + +   + D  F+ V+A Q ++  + S+  + V   AKLKVAINGFGRIGRNFLRCWHGRKDSPLEV+ +ND+GGVK ASHLLKYDS      +    +  + I+VDGK I+VVS+R+P + P    WA    ++VIEG   V  +  G GK H    AKK++  T P +G
Sbjct:   39 EFSGLKSTSCISYVHSARDSSFYDVVAAQLTSKANGSTAVKGVTV-AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVIVVNDSGGVKNASHLLKYDSMLGTFKAEVKILNNETITVDGKPIKVVSSRDPLKLP----WAELGIDIVIEG-TGVFVDGPGAGK-HIQAGAKKVII-TAPAKG 211          
BLAST of EY678099 vs. ExPASy Swiss-Prot
Match: G3PB_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPB PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.292e-33
Identity = 91/181 (50.28%), Postives = 115/181 (63.54%), Query Frame = 2
Query:   80 SEFSGLRNSASLPFGRKSSDDFHSVIALQTSALGSSSSGYRKVAAQAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTTWHL*SRC*TVGTDGISVDGKVIQVVSNRNPRQSPLGGTWAS---NLVIEGDRSVL*NKKGGGKPHFGRVAKKILFYTPPGRG 613
            +EF+GLR+S  + F  K S  F  V++ Q +   + S+   K    AKLKVAINGFGRIGRNFLRCWHGRKDSPL+VV +ND+GGVK ASHLLKYDS      +    V  + ISVDGK I+VVS+R+P + P    WA    ++VIEG   V  +  G GK H    AKK++  T P +G
Sbjct:    9 AEFAGLRSSGCVTFSNKESS-FFDVVSAQLTPKTTRSTPV-KGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSMLGTFKADVKIVDNETISVDGKHIKVVSSRDPLKLP----WAELGIDIVIEG-TGVFVDGPGAGK-HIQAGAKKVII-TAPAKG 180          
BLAST of EY678099 vs. ExPASy Swiss-Prot
Match: G3PB_ARATH (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Arabidopsis thaliana GN=GAPB PE=1 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 1.428e-32
Identity = 91/181 (50.28%), Postives = 113/181 (62.43%), Query Frame = 2
Query:   80 SEFSGLRNSASLPFGRKSSDDFHSVIALQTSALGSSSSGYRKVAAQAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTTWHL*SRC*TVGTDGISVDGKVIQVVSNRNPRQSPLGGTWAS---NLVIEGDRSVL*NKKGGGKPHFGRVAKKILFYTPPGRG 613
            +EFSGLR S+    G ++S  F   +A Q      ++S   +    AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVV +ND+GGVK ASHLLKYDS      +    V  + ISVDGK+I+VVSNR+P + P    WA    ++VIEG   V  +  G GK H    A K++  T P +G
Sbjct:   39 AEFSGLRMSS---IGGEAS--FFDAVAAQIIPKAVTTSTPVRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVVLNDSGGVKNASHLLKYDSMLGTFKAEVKIVDNETISVDGKLIKVVSNRDPLKLP----WAELGIDIVIEG-TGVFVDGPGAGK-HIQAGASKVII-TAPAKG 207          
BLAST of EY678099 vs. ExPASy Swiss-Prot
Match: G3PA_GRAVE (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Gracilaria verrucosa GN=GAPA PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.478e-29
Identity = 89/213 (41.78%), Postives = 120/213 (56.34%), Query Frame = 2
Query:   11 IPPMASATLSVAKSALQGNGKGFSEFSGLR---NSASLPFGRKSS-----DDFHSVIALQTSALGSSSSGYRKVAAQAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTGGVKQASHLLKYDSTTWHL*SRC*TVGTDGISVDGKVIQVVSNRNPRQSPLGGTWAS---NLVIEGDRSVL*NKKGGGKPHFGRVAKKILFYTPPGRGK 616
            + P++S   + +KSA+      F++FSGL+   N+A L    + S      D +       + +G+ +      A   K++VAINGFGRIGRNF+RCW GR DS ++VV INDT GVK ASHLLKYDS      S     G D I+VDGK I+VVSNRNP + P    W     ++V+E    V  +  G GK H    AKK+L  T PG+G+
Sbjct:    4 VAPVSSVFSTSSKSAVCSGRSSFAQFSGLKKVNNTARLQTAEQGSAFGGVSDANDAFFNAVNTMGAPARTSN--APSMKVRVAINGFGRIGRNFIRCWAGRTDSNMDVVCINDTSGVKTASHLLKYDSILGTFDSDV-VAGEDSITVDGKTIKVVSNRNPLELP----WKEMEIDIVVEA-TGVFVDAVGAGK-HIQAGAKKVLI-TAPGKGE 206          
The following BLAST results are available for this feature:
BLAST of EY678099 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
G3PA_PEA1.790e-5963.59Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_TOBAC5.960e-5562.83Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_ARATH1.374e-5159.71Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_SPIOL1.984e-5059.20Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_MAIZE5.403e-4858.62Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PB_SPIOL4.016e-3550.28Glyceraldehyde-3-phosphate dehydrogenase B, chloro... [more]
G3PB_PEA1.993e-3448.07Glyceraldehyde-3-phosphate dehydrogenase B, chloro... [more]
G3PB_TOBAC1.292e-3350.28Glyceraldehyde-3-phosphate dehydrogenase B, chloro... [more]
G3PB_ARATH1.428e-3250.28Glyceraldehyde-3-phosphate dehydrogenase B, chloro... [more]
G3PA_GRAVE1.478e-2941.78Glyceraldehyde-3-phosphate dehydrogenase, chloropl... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-044-C10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY678099 ID=EY678099; Name=EY678099; organism=Citrus sinensis; type=EST; length=1024bp
CATCCAGCAAATACCTCCCATGGCTTCGGCCACTCTCTCTGTAGCCAAAT
CAGCTCTTCAGGGAAATGGTAAGGGATTCTCAGAATTCTCAGGTCTACGC
AACTCTGCAAGCCTTCCTTTTGGCAGGAAATCTTCTGATGACTTCCATTC
AGTCATTGCTCTCCAGACCTCTGCTTTAGGAAGCAGCAGCAGCGGGTACA
GGAAGGTTGCTGCTCAGGCAAAGCTGAAGGTTGCAATCAATGGGTTTGGT
AGAATTGGTAGGAACTTCTTGAGGTGCTGGCACGGCCGCAAGGACTCTCC
ACTTGAAGTCGTTGCCATCAATGACACCGGAGGTGTCAAGCAGGCCTCTC
ACCTCCTCAAGTACGACTCCACCACTTGGCATCTTTGAAGCCGATGTTAA
ACCGTTGGTACTGATGGCATCTCTGTTGATGGCAAGGTCATCCAGGTTGT
TTCTAACCGCAACCCCCGTCAATCTCCCCTGGGGGGGACTTGGGCATCCA
ACCTTGTGATTGAAGGGGACAGGAGTGTTTTGTAAAACAAAAAGGGGGGG
GGCAAACCACATTTCGGGCGGGTGGCCAAAAAAATACTTTTTTACACCCC
CCCGGGAAGGGGGAAACATCCCAAACCTAACTTTTTTGGGGGGCCAATGG
GGAGAGGCTTTACAACCCAAAAAAAACCCCCTTCCTCCACCAATGGGCTT
TCTTTGCCAAAACCAAATTGCCCCTGGCCCACATTTCACTAAGGGGTTTT
TTGGAACCAAAATTTTGGGGTTTTTACTAAGGGGAAACTTAGAACACCCC
CACCCCTCCCTATAAACGTGGGGGGAACAAAAGGGATATCCCAAATGGTG
ATCCCACACCAGTATCCCATGGGGGGGGGGAGAAAAAAAAAGACGTCCAC
ACCACATAAAATTTGTCCCCACCAAAAAACAACAAGAGGTGGGGGGGGGA
GGAAAAAAAGAAGTGGGTGGGGGGCCTCCTCGTTGCCCCTTCCCCCACCC
CCCCCACACAATACCAAAAAAGAA
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