EY678089

Overview
NameEY678089
Unique NameEY678089
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1021
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY678089 vs. ExPASy Swiss-Prot
Match: MTPC2_ARATH (Metal tolerance protein C2 OS=Arabidopsis thaliana GN=MTPC2 PE=1 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 7.035e-59
Identity = 99/125 (79.20%), Postives = 111/125 (88.80%), Query Frame = 3
Query:   66 ARLILASWFLSLGVQNAEVLCLGIVSVAVFMLVMPLFKVTGGILLQMAPPSIPSSALSKCWRQIVSREDVTEVSQARFWELVPGHVVGSLSLQVNKGVDDRPILQFVHGLYHDLXVQDLTVQIDY 440
            A LILASW LSLGV+NAEVLCLG+VSV VFMLVMPLFK TGG+LLQMAPP+IPSSALSKC RQI SREDVTEV QARFWE+VPGH VGSL LQV  G+D+RP+LQ+V+ +YHDL VQDLT+Q DY
Sbjct:  268 AGLILASWLLSLGVENAEVLCLGLVSVTVFMLVMPLFKATGGVLLQMAPPNIPSSALSKCLRQITSREDVTEVLQARFWEVVPGHTVGSLRLQVKSGIDERPLLQYVYDVYHDLGVQDLTLQTDY 392          

HSP 2 Score: 42.3578 bits (98), Expect = 7.035e-59
Identity = 17/23 (73.91%), Postives = 21/23 (91.30%), Query Frame = 2
Query:    2 HASAEDMNYHSVCLHVLADSIRT 70
            +  AEDMNYHSVCLHV++DSIR+
Sbjct:  245 YRKAEDMNYHSVCLHVISDSIRS 267          
BLAST of EY678089 vs. ExPASy Swiss-Prot
Match: ZNT7A_XENLA (Zinc transporter 7-A OS=Xenopus laevis GN=slc30a7-A PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.008e-11
Identity = 35/128 (27.34%), Postives = 71/128 (55.47%), Query Frame = 3
Query:   57 ILFARLILASWFLSLGVQNAEVLCLGIVSVAVFMLVMPLFKVTGGILLQMAPPSIPSSALSKCWRQIVSREDVTEVSQARFWELVPGHVVGSLSLQVNKGVDDRPILQFVHGLYHDLXVQDLTVQIDY 440
            ++F+ +++  +    G+  A+ +C  ++++ +F+ V+PL K + GIL+Q  PP++    L +C++++   + V  + +  FW L     +G+L L +    D R IL   H ++    V+ L VQID+
Sbjct:  261 VIFSTILMQRY----GLMIADPICSMLIALLIFVSVIPLLKQSIGILMQRTPPAL-DHVLPQCYQRVQQLQGVYHLQEPHFWTLCTDVYIGTLKLVIGPEADARWILSQTHNIFTQAGVRQLYVQIDF 383          
BLAST of EY678089 vs. ExPASy Swiss-Prot
Match: ZNT7_MOUSE (Zinc transporter 7 OS=Mus musculus GN=Slc30a7 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.234e-11
Identity = 42/138 (30.43%), Postives = 76/138 (55.07%), Query Frame = 3
Query:   45 MFLQILFARL----ILASWFL--SLGVQNAEVLCLGIVSVAVFMLVMPLFKVTGGILLQMAPPSIPSSALSKCWRQIVSREDVTEVSQARFWELVPGHVVGSLSLQVNKGVDDRPILQFVHGLYHDLXVQDLTVQIDY 440
            +FL IL   L    ++AS  +  + G+  A+ +C  ++++ + + V+PL + + GIL+Q  PPS+ ++ L +C++++   + V  + +  FW L     VG+L L V    D R IL   H ++    V+ L VQID+
Sbjct:  239 VFLHILADTLGSIGVIASAIMMQNFGLMIADPICSILIAILIVVSVIPLLRESVGILMQRTPPSLENT-LPQCYQRVQQLQGVYNLQEQHFWTLCSDVYVGTLKLVVAPDADARWILSQTHNIFTQAGVRQLYVQIDF 375          
BLAST of EY678089 vs. ExPASy Swiss-Prot
Match: ZNT7_XENTR (Zinc transporter 7 OS=Xenopus tropicalis GN=slc30a7 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.836e-11
Identity = 35/112 (31.25%), Postives = 62/112 (55.36%), Query Frame = 3
Query:  102 GVQNAEVLCLGIVSVAVFMLVMPLFKVTGGILLQMAPPSIPSSALSKCWRQIVSREDVTEVSQARFWELVPGHVVGSLSLQVNKGVDDRPILQFVHGLYHDLXVQDLTVQID 437
            G+  A+ +C  ++++ +F+ V+PL K + GIL+Q  PPS+    L +C++++   + V  + +  FW L     +G+L L +    D R IL   H ++    V+ L VQID
Sbjct:  276 GLMIADPICSMLIALLIFVSVIPLLKQSIGILMQRTPPSL-DHVLPQCYQRVQQLQGVYHLQEPHFWTLCTDVYIGTLKLVIGPEADARWILSQTHNIFTQAGVRQLYVQID 386          
BLAST of EY678089 vs. ExPASy Swiss-Prot
Match: ZNT7_RAT (Zinc transporter 7 OS=Rattus norvegicus GN=Slc30a7 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 6.836e-11
Identity = 42/138 (30.43%), Postives = 75/138 (54.35%), Query Frame = 3
Query:   45 MFLQILFARL----ILASWFL--SLGVQNAEVLCLGIVSVAVFMLVMPLFKVTGGILLQMAPPSIPSSALSKCWRQIVSREDVTEVSQARFWELVPGHVVGSLSLQVNKGVDDRPILQFVHGLYHDLXVQDLTVQIDY 440
            +FL IL   L    ++AS  +  + G+  A+ +C  ++++ + + V+PL + + GIL+Q  PPS+  + L +C++++   + V  + +  FW L     VG+L L V    D R IL   H ++    V+ L VQID+
Sbjct:  239 VFLHILADTLGSIGVIASAIMMQNFGLMIADPICSILIAILIVVSVIPLLRESIGILMQRTPPSL-ENVLPQCYQRVQQLQGVYNLQEQHFWTLCSDVYVGTLKLVVAPDADARWILSQTHNIFTQAGVRQLYVQIDF 375          
BLAST of EY678089 vs. ExPASy Swiss-Prot
Match: ZNT7B_XENLA (Zinc transporter 7-B OS=Xenopus laevis GN=slc30a7-B PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.836e-11
Identity = 35/112 (31.25%), Postives = 62/112 (55.36%), Query Frame = 3
Query:  102 GVQNAEVLCLGIVSVAVFMLVMPLFKVTGGILLQMAPPSIPSSALSKCWRQIVSREDVTEVSQARFWELVPGHVVGSLSLQVNKGVDDRPILQFVHGLYHDLXVQDLTVQID 437
            G+  A+ +C  ++++ +F+ V+PL K + GIL+Q  PPS+    L +C++++   + V  + +  FW L     +G+L L +    D R IL   H ++    V+ L VQID
Sbjct:  276 GLMIADPICSMLIALLIFVSVIPLLKQSIGILMQRTPPSL-DHVLPQCYQRVQQLQGVYHLQEPHFWTLCTDVYIGTLKLVIGPEADARWILSQTHNIFTQAGVRQLYVQID 386          
The following BLAST results are available for this feature:
BLAST of EY678089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
MTPC2_ARATH7.035e-5979.20Metal tolerance protein C2 OS=Arabidopsis thaliana... [more]
ZNT7A_XENLA4.008e-1127.34Zinc transporter 7-A OS=Xenopus laevis GN=slc30a7-... [more]
ZNT7_MOUSE5.234e-1130.43Zinc transporter 7 OS=Mus musculus GN=Slc30a7 PE=1... [more]
ZNT7_XENTR6.836e-1131.25Zinc transporter 7 OS=Xenopus tropicalis GN=slc30a... [more]
ZNT7_RAT6.836e-1130.43Zinc transporter 7 OS=Rattus norvegicus GN=Slc30a7... [more]
ZNT7B_XENLA6.836e-1131.25Zinc transporter 7-B OS=Xenopus laevis GN=slc30a7-... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-044-B11-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY678089 ID=EY678089; Name=EY678089; organism=Citrus sinensis; type=EST; length=1021bp
CCACGCGTCCGCAGAAGACATGAATTACCACTCAGTTTGCTTGCATGTTC
TTGCAGATTCTATTCGCACGTTTGATATTGGCATCTTGGTTTTTGTCCCT
TGGGGTCCAGAATGCTGAAGTTTTGTGTTTGGGGATAGTTTCAGTTGCAG
TCTTCATGCTTGTCATGCCACTTTTCAAAGTGACTGGTGGTATCTTGCTT
CAGATGGCACCTCCTAGCATTCCGTCTTCAGCATTGAGTAAATGTTGGAG
ACAGATTGTTTCTCGGGAAGATGTTACAGAAGTTTCCCAAGCCCGTTTTT
GGGAGCTAGTGCCTGGCCATGTTGTTGGTTCTCTCTCACTTCAGGTTAAT
AAGGGAGTGGATGACCGCCCAATACTTCAATTTGTGCATGGTTTATACCA
CGATTTANGAGTACAAGATTTGACAGTGCAAATTGATTATGATTGAACTT
TTCTCATTTGTCTTTCAGTATTTCTTACAATTGACTGTTAAAGAATAGCT
TTAAATTGAAGCCATTATCACCTGGTACCTGCTGTTCGTCCCTCAAGCAC
TTTGTGTAATTAATACCAAAAATTTTAAATCAATTTTCCTAGGAATTAAA
AGTTCATTTTCCGTAATAACCCATACTGGTAATTTTTTTCCCGAGAAAAA
AAAAAAAAAAAAAAAAAAANAAAAAAAAAAAACANAAAAAAAGAGACAAG
GGGGGGCAGCCCAAAAGGAAGGAAACAAAACAACACAAGCAGGAGGGGGG
GGAGGGGACCTAAACGAGTAGTCCACGGTGCTTCTCAAGAAACGTGAGTT
CGTCGCTATTTAGACACATATAGGGGGGGGGGCGGCACCGGATAAAAAAA
ACTTAGGGGTTGATTTAACTTTATGTTAAACGGACGCCGTTGAAAAACCA
CTTACTCCTATGCGGGGTAGCACCCCAGGAAAATATTATAAATCATCAGG
GGCGGAGCGCGGCTCTCTTCTTCCACACGACATGCCGTGCGCAGCGAGGG
AAGAGGAGAAGAGAAAAAAAA
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