EY680446
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY680446 vs. ExPASy Swiss-Prot
Match: CHLP_ARATH (Geranylgeranyl diphosphate reductase, chloroplastic OS=Arabidopsis thaliana GN=CHLP PE=1 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 5.763e-71 Identity = 135/167 (80.84%), Postives = 144/167 (86.23%), Query Frame = 3 Query: 3 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRLCAEAIH*RVKEWEPGIIE*RGTWGNFLEKVGKKLYWPNFK 503 YAIAFQER++IPDEKM YYE+LAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLS RVALVGDAAGYVTKCSGEGIYFAAKSGR+CAEAI + + I E G +LEK K Y P ++ Sbjct: 229 YAIAFQERIRIPDEKMTYYEDLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSKRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEGSQNGKKMIDE--GDLRKYLEK-WDKTYLPTYR 392
BLAST of EY680446 vs. ExPASy Swiss-Prot
Match: CHLP_TOBAC (Geranylgeranyl diphosphate reductase, chloroplastic OS=Nicotiana tabacum GN=CHLP PE=2 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 2.960e-67 Identity = 131/169 (77.51%), Postives = 140/169 (82.84%), Query Frame = 3 Query: 3 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRLCAEAIH*RVKEWEPG--IIE*RGTWGNFLEKVGKKLYWPNFK 503 YAIAFQER+KI D+KM YYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHK DIKKFQLATR RA KI GGKIIRVEAHPIPEHPRPRRL RVALVGDAAGYVTKCSGEGIYFAAKSGR+CAEAI V+ E G +++ +LEK K YWP +K Sbjct: 226 YAIAFQERIKISDDKMKYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKADIKKFQLATRLRADSKITGGKIIRVEAHPIPEHPRPRRLQDRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI---VEGSEMGKRMVD-ESDLRKYLEK-WDKTYWPTYK 389
BLAST of EY680446 vs. ExPASy Swiss-Prot
Match: CHLP_ORYSJ (Geranylgeranyl diphosphate reductase, chloroplastic OS=Oryza sativa subsp. japonica GN=CHLP PE=2 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 1.624e-65 Identity = 118/132 (89.39%), Postives = 124/132 (93.94%), Query Frame = 3 Query: 3 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRLCAEAI 398 YAIAFQERVKIPD+KM YYE AEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHK DIKKFQ ATR RAKD+I GGKIIRVEAHPIPEHPRP+R++GRV LVGDAAGYVTKCSGEGIYFAAKSGR+CAEAI Sbjct: 225 YAIAFQERVKIPDDKMKYYEERAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKPDIKKFQAATRLRAKDRIEGGKIIRVEAHPIPEHPRPKRVAGRVTLVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI 356
BLAST of EY680446 vs. ExPASy Swiss-Prot
Match: CHLP_SYNY3 (Geranylgeranyl diphosphate reductase OS=Synechocystis sp. (strain PCC 6803) GN=chlP PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 7.825e-52 Identity = 98/133 (73.68%), Postives = 111/133 (83.46%), Query Frame = 3 Query: 3 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRLCAEAI 398 YAIAFQER+++P++KM YY+ LAEMYVGDDVSPDFY WVFPK DHVAVGTGT+ +K IK Q R RA K+ GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS R+CAE I Sbjct: 175 YAIAFQERIRLPEDKMAYYDELAEMYVGDDVSPDFYAWVFPKYDHVAVGTGTMKVNKARIKDLQAGIRTRAAKKLEGGEIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSARMCAETI 307
BLAST of EY680446 vs. ExPASy Swiss-Prot
Match: BCHP_RHOCA (Geranylgeranyl diphosphate reductase OS=Rhodobacter capsulatus GN=bchP PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 7.650e-15 Identity = 60/178 (33.71%), Postives = 81/178 (45.51%), Query Frame = 3 Query: 12 AFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRLCAEAIH*RVKEWEP--------GIIE*RGTWGNFLEKVGKKLYWPNFKGDREV 518 A+ E +K P Y ++Y +SPDFYGWVFP ++G G T D+ T R + + IR E PIP P +G+ V L GDAAG V SGEGIY+A GR AEA +K +P G ++ GT L + K Y + + +R V Sbjct: 167 AYHEIIKAPTTVANYDPTRCDVYYDGRISPDFYGWVFPHGKTASIGMG--TELPDVSLKDCTTLLRQMSGLDKEETIRKEGAPIPLQPLDVWDNGKDVVLSGDAAGVVAPSSGEGIYYAHAGGRYAAEAAMAFLKSGKPADLKLARAGFMKEHGTVFKVLRMMQDKYYHSDDRRERFV 342 The following BLAST results are available for this feature:
BLAST of EY680446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY680446 ID=EY680446; Name=EY680446; organism=Citrus sinensis; type=EST; length=550bpback to top |