EY678083
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY678083 vs. ExPASy Swiss-Prot
Match: NRAM6_ARATH (Metal transporter Nramp6 OS=Arabidopsis thaliana GN=NRAMP6 PE=2 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 1.258e-31 Identity = 86/187 (45.99%), Postives = 116/187 (62.03%), Query Frame = 3 Query: 177 KKPGWRRFLSFVGPGFLVSLAYLDPGNLETDLQAGANHRYELLWVVLIGLIFALIIQSLAANLGVSTGKHLSELCKAEYPIIVKYCLWLLGKNCLS*LLISQK*LGQPLH*IYLFNIPVWGGSSSERWPALSLLLGPAKKWGGRNLERLKNSGLEFKKGWLVFLGKIDY*KPPWPLKGLKGEFFVPQ 737 +K W+ F S++GPGFLVS+AY+DPGN ETDLQ+GA ++YELLW++L+ AL+IQSLAANLGV TGKHL+E C+AEY + + LW++ + + I + +G LFNIPVW G L LL +++G R LE L + L F L F ++ Y KP P + L G FVPQ Sbjct: 31 EKKSWKNFFSYLGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALVIQSLAANLGVVTGKHLAEHCRAEYSKVPNFMLWVVAEIAVVACDIPEV-IGTAFALNMLFNIPVWIGVLLTGLSTLILL--ALQQYGIRKLEFL-IAFLVFTIA-LCFFVELHYSKPD-PKEVLYG-LFVPQ 210
BLAST of EY678083 vs. ExPASy Swiss-Prot
Match: NRAM1_ARATH (Metal transporter Nramp1 OS=Arabidopsis thaliana GN=NRAMP1 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.643e-31 Identity = 85/187 (45.45%), Postives = 117/187 (62.57%), Query Frame = 3 Query: 177 KKPGWRRFLSFVGPGFLVSLAYLDPGNLETDLQAGANHRYELLWVVLIGLIFALIIQSLAANLGVSTGKHLSELCKAEYPIIVKYCLWLLGKNCLS*LLISQK*LGQPLH*IYLFNIPVWGGSSSERWPALSLLLGPAKKWGGRNLERLKNSGLEFKKGWLVFLGKIDY*KPPWPLKGLKGEFFVPQ 737 +K W+ F +++GPGFLVS+AY+DPGN ETDLQAGA+++YELLW++L+ AL+IQSLAANLGV TGKHL+E C+AEY + + LW++ + + I + +G LF+IPVW G L LL +K+G R LE L + L F + F ++ Y KP P + L G FVPQ Sbjct: 39 EKKSWKNFFAYLGPGFLVSIAYIDPGNFETDLQAGAHYKYELLWIILVASCAALVIQSLAANLGVVTGKHLAEQCRAEYSKVPNFMLWVVAEIAVVACDIPEV-IGTAFALNMLFSIPVWIGVLLTGLSTLILL--ALQKYGVRKLEFL-IAFLVFTIA-ICFFVELHYSKPD-PGEVLHG-LFVPQ 218
BLAST of EY678083 vs. ExPASy Swiss-Prot
Match: NRAM4_ARATH (Metal transporter Nramp4 OS=Arabidopsis thaliana GN=NRAMP4 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 2.541e-24 Identity = 59/140 (42.14%), Postives = 87/140 (62.14%), Query Frame = 3 Query: 129 INTSKDFGHHPDDPNYKKPGWRRFLSFVGPGFLVSLAYLDPGNLETDLQAGANHRYELLWVVLIGLIFALIIQSLAANLGVSTGKHLSELCKAEYPIIVKYCLWLLGKNCLS*LLISQK*LGQPLH*IYLFN--IPVWGG 542 I+ +D + D N K W++ F GPGFL+S+A+LDPGNLE+DLQAGA Y L+W+++ L+IQ L+A LGV+TG+HL+ELC+ EYP + LW++ + L I Q+ +G + L N +P+W G Sbjct: 29 IDEEEDADYDDDPGNSPKFSWKKLWLFTGPGFLMSIAFLDPGNLESDLQAGAIAGYSLIWLLMWATAIGLLIQLLSARLGVATGRHLAELCREEYPTWARMVLWIMAEIALIGADI-QEVIGSAIAIKILSNGLVPLWAG 167
BLAST of EY678083 vs. ExPASy Swiss-Prot
Match: NRAM2_RAT (Natural resistance-associated macrophage protein 2 OS=Rattus norvegicus GN=Slc11a2 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.673e-24 Identity = 47/94 (50.00%), Postives = 68/94 (72.34%), Query Frame = 3 Query: 165 DPNYKKPGWRRFLSFVGPGFLVSLAYLDPGNLETDLQAGANHRYELLWVVLIGLIFALIIQSLAANLGVSTGKHLSELCKAEYPIIVKYCLWLL 446 + Y +R+ +F GPGFL+S+AYLDPGN+E+DLQ+GA ++LLWV+L+ I L++Q LAA LGV TG HL+E+C +YP + + LWL+ Sbjct: 59 EEEYSCFSFRKLWAFTGPGFLMSIAYLDPGNIESDLQSGAVAGFKLLWVLLLATIVGLLLQRLAARLGVVTGLHLAEVCHRQYPKVPRIILWLM 152 HSP 2 Score: 26.5646 bits (57), Expect = 6.673e-24 Identity = 11/29 (37.93%), Postives = 21/29 (72.41%), Query Frame = 2 Query: 437 VVAWQ--KLLVIAADIPKVIGTAFALNIL 517 ++ W +L +I +D+ +VIG+A A+N+L Sbjct: 147 IILWLMVELAIIGSDMQEVIGSAIAINLL 175
BLAST of EY678083 vs. ExPASy Swiss-Prot
Match: NRAM2_MOUSE (Natural resistance-associated macrophage protein 2 OS=Mus musculus GN=Slc11a2 PE=1 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 6.673e-24 Identity = 47/94 (50.00%), Postives = 68/94 (72.34%), Query Frame = 3 Query: 165 DPNYKKPGWRRFLSFVGPGFLVSLAYLDPGNLETDLQAGANHRYELLWVVLIGLIFALIIQSLAANLGVSTGKHLSELCKAEYPIIVKYCLWLL 446 + Y +R+ +F GPGFL+S+AYLDPGN+E+DLQ+GA ++LLWV+L+ I L++Q LAA LGV TG HL+E+C +YP + + LWL+ Sbjct: 59 EEEYSCFSFRKLWAFTGPGFLMSIAYLDPGNIESDLQSGAVAGFKLLWVLLLATIVGLLLQRLAARLGVVTGLHLAEVCHRQYPKVPRIILWLM 152 HSP 2 Score: 26.5646 bits (57), Expect = 6.673e-24 Identity = 11/29 (37.93%), Postives = 21/29 (72.41%), Query Frame = 2 Query: 437 VVAWQ--KLLVIAADIPKVIGTAFALNIL 517 ++ W +L +I +D+ +VIG+A A+N+L Sbjct: 147 IILWLMVELAIIGSDMQEVIGSAIAINLL 175
BLAST of EY678083 vs. ExPASy Swiss-Prot
Match: NRAM2_ARATH (Metal transporter Nramp2 OS=Arabidopsis thaliana GN=NRAMP2 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 6.258e-23 Identity = 52/105 (49.52%), Postives = 69/105 (65.71%), Query Frame = 3 Query: 159 PDDPNYKKP----GWRRFLSFVGPGFLVSLAYLDPGNLETDLQAGANHRYELLWVVLIGLIFALIIQSLAANLGVSTGKHLSELCKAEYPIIVKYCLWLLGKNCL 461 PDDP WR+ F GPGFL+S+A+LDPGNLE DLQAGA Y LLW+++ L+IQ L+A +GV+TG+HL+ELC+ EYP +Y LW + + L Sbjct: 51 PDDPTTGDTPPPFSWRKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATAMGLLIQMLSARVGVATGRHLAELCRDEYPTWARYVLWSMAELAL 155
BLAST of EY678083 vs. ExPASy Swiss-Prot
Match: NRAM3_ARATH (Metal transporter Nramp3 OS=Arabidopsis thaliana GN=NRAMP3 PE=2 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 6.919e-22 Identity = 54/120 (45.00%), Postives = 78/120 (65.00%), Query Frame = 3 Query: 189 WRRFLSFVGPGFLVSLAYLDPGNLETDLQAGANHRYELLWVVLIGLIFALIIQSLAANLGVSTGKHLSELCKAEYPIIVKYCLWLLGKNCLS*LLISQK*LGQPLH*IYLFN--IPVWGG 542 W++ F GPGFL+S+A+LDPGNLE DLQAGA Y LLW+++ L++Q L+A LGV+TG+HL+ELC+ EYP + LW++ + L I Q+ +G + L N +P+W G Sbjct: 53 WKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAVAGYSLLWLLMWATAMGLLVQLLSARLGVATGRHLAELCRDEYPTWARMVLWVMAELALIGSDI-QEVIGSAIAIKILSNGILPLWAG 171
BLAST of EY678083 vs. ExPASy Swiss-Prot
Match: NRAM2_HUMAN (Natural resistance-associated macrophage protein 2 OS=Homo sapiens GN=SLC11A2 PE=1 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 1.541e-21 Identity = 52/128 (40.62%), Postives = 85/128 (66.41%), Query Frame = 3 Query: 165 DPNYKKPGWRRFLSFVGPGFLVSLAYLDPGNLETDLQAGANHRYELLWVVLIGLIFALIIQSLAANLGVSTGKHLSELCKAEYPIIVKYCLWLLGKNCLS*LLISQK*LGQ--PLH*IYLFNIPVWGG 542 + Y +R+ +F GPGFL+S+AYLDPGN+E+DLQ+GA ++LLW++L+ + L++Q LAA LGV TG HL+E+C +YP + + LWL+ + + + Q+ +G ++ + + IP+WGG Sbjct: 59 EEEYSCFSFRKLWAFTGPGFLMSIAYLDPGNIESDLQSGAVAGFKLLWILLLATLVGLLLQRLAARLGVVTGLHLAEVCHRQYPKVPRVILWLMVELAIIGSDM-QEVIGSAIAINLLSVGRIPLWGG 185
BLAST of EY678083 vs. ExPASy Swiss-Prot
Match: NRAM1_DICDI (Metal transporter nramp1 homolog OS=Dictyostelium discoideum GN=nramp1 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 2.013e-21 Identity = 62/154 (40.26%), Postives = 89/154 (57.79%), Query Frame = 3 Query: 162 DDPNYKKPGWRRFLSFVGPGFLVSLAYLDPGNLETDLQAGANHRYELLWVVLIGLIFALIIQSLAANLGVSTGKHLSELCKAEYPIIVKYCLWLLGKNCLS*LLISQK*LGQPLH*IYLFN--IPVWGGSSSERWPALSLLLGPAKKWGGRNLE 617 D P+ K ++ +F GPGFL+S+AYLDPGNLE+D+QAGA Y+LLWV+ + +Q LA+ LGV TGKHL+E C+ +YP + LWL+ + + I Q+ +G + L N IP+W G + L +K+G R LE Sbjct: 62 DKPDSKWINFKTLWAFTGPGFLMSIAYLDPGNLESDIQAGAMAGYQLLWVLFWSTVIGFWLQMLASRLGVVTGKHLAEHCREQYPKTPRLLLWLMTELAIIGSDI-QEVIGTAIALQILSNGHIPLWAGVLFTAADTFTFLF--LEKYGIRKLE 212
BLAST of EY678083 vs. ExPASy Swiss-Prot
Match: NRAM5_ARATH (Metal transporter Nramp5 OS=Arabidopsis thaliana GN=NRAMP5 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.629e-21 Identity = 58/147 (39.46%), Postives = 87/147 (59.18%), Query Frame = 3 Query: 189 WRRFLSFVGPGFLVSLAYLDPGNLETDLQAGANHRYELLWVVLIGLIFALIIQSLAANLGVSTGKHLSELCKAEYPIIVKYCLWLLGKNCLS*LLISQK*LGQPLH*IYLFN--IPVWGGSSSERWPALSLLLGPAKKWGGRNLERL 623 W + F GPGFL+S+A+LDPGN+E DLQAGA Y LLW++L + L++Q L+A +GV+TG+HL+E+C++EYP + LW + + L I Q+ +G + L +P+W G + L+ +K G R LE L Sbjct: 67 WAKLWKFTGPGFLMSIAFLDPGNIEGDLQAGAVAGYSLLWLLLWATLMGLLMQLLSARIGVATGRHLAEICRSEYPSWARILLWFMAEVALIGADI-QEVIGSAIALQILTRGFLPIWVGVIITSFDC--FLISYLEKCGMRKLEGL 210 The following BLAST results are available for this feature:
BLAST of EY678083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 134
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Sequences
The
following sequences are available for this feature:
EST sequence >EY678083 ID=EY678083; Name=EY678083; organism=Citrus sinensis; type=EST; length=1052bpback to top |