FC871635 | Citrus Genome Database

Overview


Name	FC871635
Unique Name	FC871635
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	697

Libraries


Library Name	Type
AbsCFruit1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig8273	contig	Csv1_Contig8273:618..1314.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: ENPL_HORVU (Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.038e-38
Identity = 75/97 (77.32%), Postives = 79/97 (81.44%), Query Frame = 2

Query:    2 LNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWAS 292
            LNLIGQFGVGFYSVYLVADYVEV+SKHNDDKQYVWESKADG+FAISEDTWNEPLGRGTEIKLHLRDEA                  FINFPIY+WA+
Sbjct:  190 LNLIGQFGVGFYSVYLVADYVEVVSKHNDDKQYVWESKADGSFAISEDTWNEPLGRGTEIKLHLRDEAKEYLEEGKLKDLVKKYSEFINFPIYLWAT 286

HSP 2 Score: 143.28 bits (360), Expect = 1.201e-33
Identity = 62/73 (84.93%), Postives = 70/73 (95.89%), Query Frame = 2

Query:  479 LLNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTN 697
            LLND+KA+WLR+PKEVTEEEYAKFYHSL KDF D+KP++WSHF+AEGDVEFKA+LFVPPKAPHDLYESYYN N
Sbjct:  338 LLNDMKAVWLRSPKEVTEEEYAKFYHSLAKDFGDDKPMSWSHFSAEGDVEFKALLFVPPKAPHDLYESYYNAN 410

[Close]

BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: ENPL_CATRO (Endoplasmin homolog OS=Catharanthus roseus GN=HSP90 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.210e-37
Identity = 74/97 (76.29%), Postives = 77/97 (79.38%), Query Frame = 2

Query:    2 LNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWAS 292
            LNLIGQFGVGFYSVYLV DYVEVISKHNDDKQY+WESKADGAFAISED WNEPLGRGTEI+LHLRDEA                  FINFPIY+WAS
Sbjct:  190 LNLIGQFGVGFYSVYLVPDYVEVISKHNDDKQYIWESKADGAFAISEDVWNEPLGRGTEIRLHLRDEAQEYLDEFKLKELVKRYSEFINFPIYLWAS 286

HSP 2 Score: 134.42 bits (337), Expect = 5.579e-31
Identity = 59/73 (80.82%), Postives = 66/73 (90.41%), Query Frame = 2

Query:  479 LLNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTN 697
            LLND+KAIWLRNPK+VT++EY KFYHSL KDFS+EKPLAWSHF AEGDVEFKA   +PPKAP DLYESYYN+N
Sbjct:  344 LLNDMKAIWLRNPKDVTDDEYTKFYHSLAKDFSEEKPLAWSHFTAEGDVEFKAFTLLPPKAPQDLYESYYNSN 416

[Close]

BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: ENPL_ARATH (Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 9.826e-36
Identity = 71/97 (73.20%), Postives = 76/97 (78.35%), Query Frame = 2

Query:    2 LNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWAS 292
            LNLIGQFGVGFYS YLVADY+EVISKHNDD QYVWESKA+G FA+SEDTWNEPLGRGTEI+LHLRDEAG                 FINFPI +WAS
Sbjct:  189 LNLIGQFGVGFYSAYLVADYIEVISKHNDDSQYVWESKANGKFAVSEDTWNEPLGRGTEIRLHLRDEAGEYLEESKLKELVKRYSEFINFPISLWAS 285

HSP 2 Score: 147.517 bits (371), Expect = 6.369e-35
Identity = 66/73 (90.41%), Postives = 71/73 (97.26%), Query Frame = 2

Query:  479 LLNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTN 697
            LLNDVKAIWLR+PKEVTEEEY KFYHSL KDF+DEKP+AWSHFNAEGDVEFKAVL+VPPKAPHDLYESYYN+N
Sbjct:  340 LLNDVKAIWLRSPKEVTEEEYTKFYHSLSKDFTDEKPMAWSHFNAEGDVEFKAVLYVPPKAPHDLYESYYNSN 412

[Close]

BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HSP90_EIMTE (Heat shock protein 90 OS=Eimeria tenella GN=HSP90 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.734e-22
Identity = 50/92 (54.35%), Postives = 62/92 (67.39%), Query Frame = 2

Query:    2 LNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPI 277
            +++IGQFGVGFYS YLVAD V V+SKHNDD+QYVWES A G+F + +D   EPLGRGT I LHL+++ G                 FI+FPI
Sbjct:  115 ISMIGQFGVGFYSAYLVADSVTVVSKHNDDEQYVWESAAGGSFTVQKDDKYEPLGRGTRIILHLKEDQGEYLEERRLKDLVKKHSEFISFPI 206

HSP 2 Score: 81.6481 bits (200), Expect = 4.292e-15
Identity = 40/72 (55.56%), Postives = 51/72 (70.83%), Query Frame = 2

Query:  482 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTN 697
            LN  K +W+R P+EVTEEEYA FY SL  D+  E+ LA  HF+ EG +EFKA+LFVP +AP DL+E+    N
Sbjct:  274 LNKQKPLWMRKPEEVTEEEYASFYKSLSNDW--EEHLAVKHFSVEGQLEFKALLFVPKRAPFDLFETRKKRN 343

[Close]

BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HSP82_MAIZE (Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.183e-22
Identity = 49/95 (51.58%), Postives = 64/95 (67.37%), Query Frame = 2

Query:    2 LNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIW 286
            +++IGQFGVGFYS YLVAD V V +KHNDD+QYVWES+A G+F ++ DT  E LGRGT+I L L+D+                   FI++PIY+W
Sbjct:  126 VSMIGQFGVGFYSAYLVADRVMVTTKHNDDEQYVWESQAGGSFTVTHDTTGEQLGRGTKITLFLKDDQLEYLEERRLKDLVKKHSEFISYPIYLW 220

HSP 2 Score: 79.7221 bits (195), Expect = 1.631e-14
Identity = 37/72 (51.39%), Postives = 49/72 (68.06%), Query Frame = 2

Query:  482 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTN 697
            +N  K IWLR P+E+T +EYA FY SL  D+ D   LA  HF+ EG +EFKA+LFVP +AP DL+++    N
Sbjct:  276 INKQKPIWLRKPEEITRDEYASFYKSLTNDWEDH--LAVKHFSVEGQLEFKAILFVPRRAPFDLFDTRKKLN 345

[Close]

BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HSP90_ASPFU (Heat shock protein 90 OS=Aspergillus fumigatus GN=hsp90 PE=1 SV=3)

HSP 1 Score: 103.99 bits (258), Expect = 8.075e-22
Identity = 49/94 (52.13%), Postives = 64/94 (68.09%), Query Frame = 2

Query:    2 LNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYI 283
            +++IGQFGVGFYS YLVAD V V+SK+NDD+QY+WES A G F +++DT  E LGRGT+I LHL+DE                   FI++PIY+
Sbjct:  114 ISMIGQFGVGFYSAYLVADRVTVVSKNNDDEQYIWESAAGGTFTLTQDTEGEQLGRGTKIILHLKDEQTDYLNESRIKEVVRKHSEFISYPIYL 207

HSP 2 Score: 80.1073 bits (196), Expect = 1.249e-14
Identity = 37/72 (51.39%), Postives = 49/72 (68.06%), Query Frame = 2

Query:  482 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTN 697
            LN  K IW RNP ++T+EEYA FY SL  D+ D   LA  HF+ EG +EF+A+L+VP +AP DL+E+    N
Sbjct:  267 LNKTKPIWTRNPADITQEEYASFYKSLSNDWEDH--LAVKHFSVEGQLEFRAILYVPKRAPFDLFETKKTKN 336

[Close]

BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HSP81_ARATH (Heat shock protein 81-1 OS=Arabidopsis thaliana GN=HSP81-1 PE=1 SV=3)

HSP 1 Score: 103.219 bits (256), Expect = 1.377e-21
Identity = 48/95 (50.53%), Postives = 64/95 (67.37%), Query Frame = 2

Query:    2 LNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIW 286
            +++IGQFGVGFYS YLVA+ V V +KHNDD+QYVWES+A G+F ++ D   EPLGRGT+I L L+D+                   FI++PIY+W
Sbjct:  115 VSMIGQFGVGFYSAYLVAEKVVVTTKHNDDEQYVWESQAGGSFTVTRDVDGEPLGRGTKITLFLKDDQLEYLEERRLKDLVKKHSEFISYPIYLW 209

HSP 2 Score: 82.8037 bits (203), Expect = 1.927e-15
Identity = 39/73 (53.42%), Postives = 51/73 (69.86%), Query Frame = 2

Query:  479 LLNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTN 697
            L+N  K IWLR P+E+T+EEYA FY SL  D+ D   LA  HF+ EG +EFKA+LFVP +AP DL+++    N
Sbjct:  261 LINKQKPIWLRKPEEITKEEYAAFYKSLTNDWEDH--LAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKLN 331

[Close]

BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HSP83_ORYSJ (Heat shock protein 81-3 OS=Oryza sativa subsp. japonica GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.166e-20
Identity = 47/95 (49.47%), Postives = 64/95 (67.37%), Query Frame = 2

Query:    2 LNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIW 286
            +++IGQFGVGFYS YLVA+ V V +KHNDD+QYVWES+A G+F ++ DT  E LGRGT+I L+L+D+                   FI++PI +W
Sbjct:  116 VSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLVKKHSEFISYPISLW 210

HSP 2 Score: 80.8777 bits (198), Expect = 7.321e-15
Identity = 38/73 (52.05%), Postives = 52/73 (71.23%), Query Frame = 2

Query:  479 LLNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTN 697
            ++N  K IWLR P+E+T+EEYA FY SL  D+  E+ LA  HF+ EG +EFKA+LFVP +AP DL+++    N
Sbjct:  262 VMNKQKPIWLRKPEEITKEEYAAFYKSLTNDW--EEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKQN 332

[Close]

BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HSP82_ORYSJ (Heat shock protein 81-2 OS=Oryza sativa subsp. japonica GN=HSP81-2 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.166e-20
Identity = 47/95 (49.47%), Postives = 64/95 (67.37%), Query Frame = 2

Query:    2 LNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIW 286
            +++IGQFGVGFYS YLVA+ V V +KHNDD+QYVWES+A G+F ++ DT  E LGRGT+I L+L+D+                   FI++PI +W
Sbjct:  116 VSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLVKKHSEFISYPISLW 210

HSP 2 Score: 80.8777 bits (198), Expect = 7.321e-15
Identity = 38/73 (52.05%), Postives = 52/73 (71.23%), Query Frame = 2

Query:  479 LLNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTN 697
            ++N  K IWLR P+E+T+EEYA FY SL  D+  E+ LA  HF+ EG +EFKA+LFVP +AP DL+++    N
Sbjct:  262 VMNKQKPIWLRKPEEITKEEYAAFYKSLTNDW--EEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKQN 332

[Close]

BLAST of FC871635 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSJ (Heat shock protein 81-1 OS=Oryza sativa subsp. japonica GN=HSP81-1 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.166e-20
Identity = 47/95 (49.47%), Postives = 64/95 (67.37%), Query Frame = 2

Query:    2 LNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIW 286
            +++IGQFGVGFYS YLVA+ V V +KHNDD+QYVWES+A G+F ++ DT  E LGRGT+I L+L+D+                   FI++PI +W
Sbjct:  116 VSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLIKKHSEFISYPISLW 210

HSP 2 Score: 81.2629 bits (199), Expect = 5.605e-15
Identity = 39/73 (53.42%), Postives = 52/73 (71.23%), Query Frame = 2

Query:  479 LLNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTN 697
            L+N  K IW+R P+E+T+EEYA FY SL  D+  E+ LA  HF+ EG +EFKAVLFVP +AP DL+++    N
Sbjct:  262 LVNKQKPIWMRKPEEITKEEYAAFYKSLTNDW--EEHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTRKKLN 332

The following BLAST results are available for this feature:

BLAST of FC871635 vs. ExPASy Swiss-Prot

BLAST of FC871635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 118


Match Name	E-value	Identity	Description
ENPL_HORVU	8.038e-38	77.32	Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1	[more]
ENPL_CATRO	5.210e-37	76.29	Endoplasmin homolog OS=Catharanthus roseus GN=HSP9...	[more]
ENPL_ARATH	9.826e-36	73.20	Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD...	[more]
HSP90_EIMTE	4.734e-22	54.35	Heat shock protein 90 OS=Eimeria tenella GN=HSP90 ...	[more]
HSP82_MAIZE	6.183e-22	51.58	Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV...	[more]
HSP90_ASPFU	8.075e-22	52.13	Heat shock protein 90 OS=Aspergillus fumigatus GN=...	[more]
HSP81_ARATH	1.377e-21	50.53	Heat shock protein 81-1 OS=Arabidopsis thaliana GN...	[more]
HSP83_ORYSJ	1.166e-20	49.47	Heat shock protein 81-3 OS=Oryza sativa subsp. jap...	[more]
HSP82_ORYSJ	1.166e-20	49.47	Heat shock protein 81-2 OS=Oryza sativa subsp. jap...	[more]
HSP81_ORYSJ	1.166e-20	49.47	Heat shock protein 81-1 OS=Oryza sativa subsp. jap...	[more]

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Properties


Property Name	Value
Genbank description	KN0AAK3AD01FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK3AD01, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC871635 ID=FC871635; Name=FC871635; organism=Citrus sinensis; type=EST; length=697bp
CCTCAATCTTATCGGGCAATTTGGTGTTGGCTTTTACTCTGTATATCTTG
TTGCTGACTATGTTGAAGTCATTAGCAAACATAATGATGACAAACAGTAT
GTATGGGAATCAAAGGCTGATGGAGCATTTGCAATTTCTGAGGACACATG
GAATGAGCCACTAGGACGCGGAACCGAGATTAAATTGCACCTCAGAGATG
AAGCTGGGGAGTACTTGGAAGAGAGCAAGTTGAAGGAGTTGGTGAAGAAA
TATTCTGAATTTATCAACTTCCCCATCTATATCTGGGCCAGCAAAGAGGT
TGATGTGGATGTTCCTGCTGACGAGGATGACTCAAGTGATGAAGAGGAGA
AAGCCGAAAAAGAAGAAGAAACGGAAAAAAGTGAAAGTGAAAGTGAAAGT
GAAGATGAAGATGAAGATGAAGATTCTGAGAAAAAGCCAAAGACCAAGAC
AGTGAAGGAAACTACTTATGAGTGGGAGCTCTTGAACGATGTAAAGGCTA
TATGGCTGCGGAATCCAAAGGAAGTGACAGAGGAAGAGTACGCCAAATTC
TATCACTCTTTAGTAAAGGATTTTAGTGATGAGAAGCCCTTAGCATGGAG
TCACTTCAATGCTGAAGGCGATGTTGAGTTTAAGGCTGTTTTGTTTGTGC
CTCCAAAGGCTCCTCATGATCTTTATGAGAGTTATTATAACACCAAT