FC871616
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC871616 vs. ExPASy Swiss-Prot
Match: RL142_ARATH (60S ribosomal protein L14-2 OS=Arabidopsis thaliana GN=RPL14B PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 4.629e-45 Identity = 92/109 (84.40%), Postives = 98/109 (89.91%), Query Frame = 1 Query: 22 VIVHVLDQNRALVDAPDMERGQMNFKRLSLTDIKIDIPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVHKKRASLNDFDRIKLMLAKIKKGGLVRQELAKLKKENAA 348 VIV V+DQNRALVDAPDMER QMNFKRLSLTDI IDI RVPKKK LI+AMEKADVKNKWE SSWGRKLIV K+RA+LNDFDR K+MLAKIKK G+VRQELAKLKKE A Sbjct: 26 VIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVIDINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGVVRQELAKLKKEITA 134
BLAST of FC871616 vs. ExPASy Swiss-Prot
Match: RL141_ARATH (60S ribosomal protein L14-1 OS=Arabidopsis thaliana GN=RPL14A PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 3.000e-44 Identity = 90/109 (82.57%), Postives = 98/109 (89.91%), Query Frame = 1 Query: 22 VIVHVLDQNRALVDAPDMERGQMNFKRLSLTDIKIDIPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVHKKRASLNDFDRIKLMLAKIKKGGLVRQELAKLKKENAA 348 VIV V+DQNRALVDAPDMER QMN KRLSLTDI IDI RVPKKK LI+AMEKADVKNKWE SSWGRKLIV K+RA+LNDFDR K+MLAKIK+ G+VRQELAKLK+E AA Sbjct: 26 VIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVIDINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGIVRQELAKLKREIAA 134
BLAST of FC871616 vs. ExPASy Swiss-Prot
Match: RL14_PEA (Probable 60S ribosomal protein L14 OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 7.647e-40 Identity = 84/111 (75.68%), Postives = 91/111 (81.98%), Query Frame = 1 Query: 13 RHAVIVHVLDQNRALVDAPDMERGQMNFKRLSLTDIKIDIPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVHKKRASLNDFDRIKLMLAKIKKGGLVRQELAKLKKENA 345 R VIV V+DQ RALVDAPDMER +NFKRLSLTD+KIDI RVPKKK LI A+E ADVKNKW SSWGRKLIV K RA+LNDFDR K+MLAKIK+ VRQELAKLKK A Sbjct: 23 RLVVIVDVIDQTRALVDAPDMERSPINFKRLSLTDLKIDIKRVPKKKDLIKALEAADVKNKWAKSSWGRKLIVKKTRAALNDFDRFKIMLAKIKRAAGVRQELAKLKKTAA 133
BLAST of FC871616 vs. ExPASy Swiss-Prot
Match: RL14_LUMRU (60S ribosomal protein L14 OS=Lumbricus rubellus GN=RPL14 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.833e-17 Identity = 47/106 (44.34%), Postives = 63/106 (59.43%), Query Frame = 1 Query: 25 IVHVLDQNRALVDAP--DMERGQMNFKRLSLTDIKIDIPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVHKKRASLNDFDRIKLMLAKIKKGGLVRQELAKLKK 336 IV V+DQNRALVD P + R MNFK L LT++K P K + A EK ++ KWE S +K+ +KR +L DF+R KLM AK + L++ E KL+K Sbjct: 27 IVDVIDQNRALVDGPCTHVARKSMNFKELELTNLKAKFPHSAKTGVVKKAWEKDEISKKWEESHLAKKIAAKEKRKTLTDFERFKLMKAKQARNRLIKIEFGKLRK 132
BLAST of FC871616 vs. ExPASy Swiss-Prot
Match: RL14_PIG (60S ribosomal protein L14 OS=Sus scrofa GN=RPL14 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.126e-17 Identity = 44/106 (41.51%), Postives = 66/106 (62.26%), Query Frame = 1 Query: 25 IVHVLDQNRALVDAP--DMERGQMNFKRLSLTDIKIDIPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVHKKRASLNDFDRIKLMLAKIKKGGLVRQELAKLKK 336 IV V+DQNRALVD P + R M FK + LTD + P ++K + A EKAD+ KW ++ W +K+ +K+A + DFDR K+M A+ + L++ E+ KL+K Sbjct: 27 IVDVIDQNRALVDGPCTQVRRQAMPFKCMQLTDFILKFPHSARQKYVRKAWEKADINAKWAATRWAKKIEAREKKAKMTDFDRYKVMKARKMRNRLIKLEVKKLQK 132
BLAST of FC871616 vs. ExPASy Swiss-Prot
Match: RL14_BOVIN (60S ribosomal protein L14 OS=Bos taurus GN=RPL14 PE=2 SV=3) HSP 1 Score: 86.6557 bits (213), Expect = 4.083e-17 Identity = 44/106 (41.51%), Postives = 66/106 (62.26%), Query Frame = 1 Query: 25 IVHVLDQNRALVDAP--DMERGQMNFKRLSLTDIKIDIPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVHKKRASLNDFDRIKLMLAKIKKGGLVRQELAKLKK 336 IV V+DQNRALVD P + R M FK + LTD + P ++K + A EKAD+ KW ++ W +K+ +K+A + DFDR K+M A+ + L++ E+ KL+K Sbjct: 27 IVDVIDQNRALVDGPCTQVRRQAMPFKCMQLTDFILKFPHSARQKYVRKAWEKADINAKWAATRWAKKIEAREKKAKMTDFDRYKVMKARKMRNRLIKIEVKKLQK 132
BLAST of FC871616 vs. ExPASy Swiss-Prot
Match: RL14_HUMAN (60S ribosomal protein L14 OS=Homo sapiens GN=RPL14 PE=1 SV=4) HSP 1 Score: 86.2705 bits (212), Expect = 5.333e-17 Identity = 42/106 (39.62%), Postives = 65/106 (61.32%), Query Frame = 1 Query: 25 IVHVLDQNRALVDAP--DMERGQMNFKRLSLTDIKIDIPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVHKKRASLNDFDRIKLMLAKIKKGGLVRQELAKLKK 336 IV V+DQNRALVD P + R M FK + LTD + P +K + A +KAD+ KW ++ W +K+ +++A + DFDR K+M AK + +++ E+ KL+K Sbjct: 27 IVDVIDQNRALVDGPCTQVRRQAMPFKCMQLTDFILKFPHSAHQKYVRQAWQKADINTKWAATRWAKKIEARERKAKMTDFDRFKVMKAKKMRNRIIKNEVKKLQK 132
BLAST of FC871616 vs. ExPASy Swiss-Prot
Match: RL14_RAT (60S ribosomal protein L14 OS=Rattus norvegicus GN=Rpl14 PE=1 SV=3) HSP 1 Score: 85.8853 bits (211), Expect = 6.965e-17 Identity = 42/106 (39.62%), Postives = 66/106 (62.26%), Query Frame = 1 Query: 25 IVHVLDQNRALVDAP--DMERGQMNFKRLSLTDIKIDIPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVHKKRASLNDFDRIKLMLAKIKKGGLVRQELAKLKK 336 IV V+DQNRALVD P + R M FK + LTD + P ++K + A EKAD+ KW ++ W +K+ +++A + DFDR K+M AK + +++ E+ KL++ Sbjct: 27 IVDVIDQNRALVDGPCTRVRRQAMPFKCMQLTDFILKFPHSARQKYVRKAWEKADINTKWAATRWAKKIDARERKAKMTDFDRFKVMKAKKMRNRIIKTEVKKLQR 132
BLAST of FC871616 vs. ExPASy Swiss-Prot
Match: RL14_MOUSE (60S ribosomal protein L14 OS=Mus musculus GN=Rpl14 PE=2 SV=3) HSP 1 Score: 85.8853 bits (211), Expect = 6.965e-17 Identity = 42/106 (39.62%), Postives = 66/106 (62.26%), Query Frame = 1 Query: 25 IVHVLDQNRALVDAP--DMERGQMNFKRLSLTDIKIDIPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVHKKRASLNDFDRIKLMLAKIKKGGLVRQELAKLKK 336 IV V+DQNRALVD P + R M FK + LTD + P ++K + A EKAD+ KW ++ W +K+ +++A + DFDR K+M AK + +++ E+ KL++ Sbjct: 27 IVDVIDQNRALVDGPCTRVRRQAMPFKCMQLTDFILKFPHSARQKYVRKAWEKADINTKWAATRWAKKIDARERKAKMTDFDRFKVMKAKKMRNRIIKTEVKKLQR 132
BLAST of FC871616 vs. ExPASy Swiss-Prot
Match: RL14_GRIJA (60S ribosomal protein L14 OS=Griffithsia japonica GN=RPL14 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.647e-16 Identity = 48/107 (44.86%), Postives = 68/107 (63.55%), Query Frame = 1 Query: 22 VIVHVLDQNRALVDAPD--MERGQMNFKRLSLTDIKID-IPRVPKKKTLIDAMEKADVKNKWESSSWGRKLIVHKKRASLNDFDRIKLMLAKIKKGGLVRQELAKLK 333 VIV +LDQNR LVD+P ++R +N KR++LT IK+D I R + A V + +S WG+KL +KRA+L+DF R K+M+A++KK + ELAKLK Sbjct: 26 VIVDILDQNRILVDSPSHGLKRKVINVKRIALTSIKVDDIARGAPVAEVKSKYTAAKVDETFAASGWGKKLAKREKRAALDDFGRFKVMVARMKKSKAINAELAKLK 132 The following BLAST results are available for this feature:
BLAST of FC871616 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871616 ID=FC871616; Name=FC871616; organism=Citrus sinensis; type=EST; length=391bpback to top |