EY680444

Overview
NameEY680444
Unique NameEY680444
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680444 vs. ExPASy Swiss-Prot
Match: GLUA_DICDI (Lysosomal beta glucosidase OS=Dictyostelium discoideum GN=gluA PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.189e-19
Identity = 62/185 (33.51%), Postives = 91/185 (49.19%), Query Frame = 2
Query:   92 IKDLLSRMTLKEKIGQMTQIERGVATP--------SVLKDXXXXXXXXXXXXMPSVNAL--------SAGWADMVDGFQKAAL-ASRLGIPLIYGIDAVHGNNSVYGATIFPHNVNLGATRDGDLARRIGVATALEVRASGIHYTFAPCVAVGKDPRWGRYYESYSEDTEIVRKM-TSIVSGLQG 592
            + +L+S+M++ EKIGQMTQ++    T         + L               P    L        S+ W DM++  Q   +  S   IP+IYG+D+VHG N V+ AT+FPHN  L AT + + A      T+ +  A GI + FAP + +G  P W R YE++ ED  +   M  + V G QG
Sbjct:   80 VDNLMSKMSITEKIGQMTQLDITTLTSPNTITINETTLAYYAKTYYIGSYLNSPVSGGLAGDIHHINSSVWLDMINTIQTIVIEGSPNKIPMIYGLDSVHGANYVHKATLFPHNTGLAATFNIEHATTAAQITSKDTVAVGIPWVFAPVLGIGVQPLWSRIYETFGEDPYVASMMGAAAVRGFQG 264          
BLAST of EY680444 vs. ExPASy Swiss-Prot
Match: BGLX_SALTY (Periplasmic beta-glucosidase OS=Salmonella typhimurium GN=bglX PE=3 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.265e-16
Identity = 63/200 (31.50%), Postives = 97/200 (48.50%), Query Frame = 2
Query:   41 AVMESIYRNPNAHVEDR---IKDLLSRMTLKEKIGQMTQIERGVATPS-----VLKDXXXXXXXXXXXXMPSVNAL--SAGWADMVDGFQKAALASRLGIPLIYGIDAVHGNNSVYGATIFPHNVNLGATRDGDLARRIGVATALEVRASGIHYTFAPCVAVGKDPRWGRYYESYSEDTEIVRKM-TSIVSGLQGRPPQE 607
            A+ E+++ N     E R   + DLL +MT+ EKIGQ+  I  G   P      ++KD               V A+  +    D+     +    SRL IPL +  D VHG       T+FP ++ L ++ + D  R +G  +A E    G++ T+AP V V +DPRWGR  E + EDT +   M  ++V  +QG+ P +
Sbjct:   18 ALAENLFGNHPLTPEARDAFVTDLLKKMTVDEKIGQLRLISVGPDNPKEAIREMIKDG-------------QVGAIFNTVTRQDIRQMQDQVMALSRLKIPLFFAYDVVHGQR-----TVFPISLGLASSFNLDAVRTVGRVSAYEAADDGLNMTWAPMVDVSRDPRWGRASEGFGEDTYLTSIMGETMVKAMQGKSPAD 199          
BLAST of EY680444 vs. ExPASy Swiss-Prot
Match: BGLX_ECOLI (Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) GN=bglX PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.243e-14
Identity = 53/178 (29.78%), Postives = 86/178 (48.31%), Query Frame = 2
Query:   92 IKDLLSRMTLKEKIGQMTQIERGVATPS-----VLKDXXXXXXXXXXXXMPSVNALSAGWADMVDGFQKAALASRLGIPLIYGIDAVHGNNSVYGATIFPHNVNLGATRDGDLARRIGVATALEVRASGIHYTFAPCVAVGKDPRWGRYYESYSEDTEIVRKM-TSIVSGLQGRPPQE 607
            + +LL +MT+ EKIGQ+  I  G   P      ++KD               + A+     ++          SRL IPL +  D +HG       T+FP ++ L ++ + D  + +G  +A E    G++ T+AP V V +DPRWGR  E + EDT +   M  ++V  +QG+ P +
Sbjct:   38 VTELLKKMTVDEKIGQLRLISVGPDNPKEAIREMIKDGQVGAIFNTVTRQ-DIRAMQDQVMEL----------SRLKIPLFFAYDVLHGQR-----TVFPISLGLASSFNLDAVKTVGRVSAYEAADDGLNMTWAPMVDVSRDPRWGRASEGFGEDTYLTSTMGKTMVEAMQGKSPAD 199          
The following BLAST results are available for this feature:
BLAST of EY680444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
GLUA_DICDI2.189e-1933.51Lysosomal beta glucosidase OS=Dictyostelium discoi... [more]
BGLX_SALTY2.265e-1631.50Periplasmic beta-glucosidase OS=Salmonella typhimu... [more]
BGLX_ECOLI1.243e-1429.78Periplasmic beta-glucosidase OS=Escherichia coli (... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-011-B06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680444 ID=EY680444; Name=EY680444; organism=Citrus sinensis; type=EST; length=814bp
CCACGCGTCCGCAAATCAGAAGCAAAGCAGAGCTGTAGAGGCAGTGATGG
AGTCCATTTACAGGAACCCAAATGCCCATGTTGAGGATCGAATCAAAGAC
CTTCTCTCTCGCATGACTTTGAAGGAGAAAATTGGTCAAATGACCCAGAT
CGAGCGCGGAGTCGCAACTCCATCTGTTCTCAAAGACTTATCTATTGGGA
GTATTTTAAGTTCAGGAGGGAGCATGCCGTCTGTGAATGCGTTGTCAGCT
GGTTGGGCGGATATGGTTGATGGATTCCAGAAGGCGGCACTCGCGTCGAG
GCTTGGGATACCATTGATTTATGGGATTGATGCAGTTCATGGTAACAATA
GTGTATATGGTGCCACCATATTTCCTCACAATGTTAACCTTGGGGCGACA
AGAGATGGAGATTTGGCTCGAAGGATTGGGGTTGCAACAGCTCTTGAAGT
TCGGGCAAGCGGCATTCATTATACTTTTGCTCCATGTGTGGCTGTCGGAA
AAGATCCCAGATGGGGAAGATACTATGAGAGTTATAGTGAAGATACTGAG
ATTGTTAGAAAAATGACTTCCATTGTCTCAGGCTTGCAGGGACGGCCACC
CCAAGAGCACCCCAGGGGCTACCCATATGTAGCTGGAAAGGTTTTGTAAT
CTCCGATTGGGGAAGTCTAGACCGACTTAACCAGCCTCATGGATCAAACT
ATCGTTACTGCATTTCCACTGCTGTAATGCTGGAATTTGACTTGGTCAGG
GTTCCCCATAAATTCCATTAATTTTTTGAGGATTTTGAATAATCGGGGAA
AAATCCGGGGAAGG
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