EY728689

Overview
NameEY728689
Unique NameEY728689
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length803
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY728689_ssr385 microsatellite EY728689_ssr385:385..394. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7973 contig Csv1_Contig7973:484..1286. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728689 vs. ExPASy Swiss-Prot
Match: GCS1_CAEEL (Probable mannosyl-oligosaccharide glucosidase OS=Caenorhabditis elegans GN=F13H10.4 PE=1 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 1.733e-45
Identity = 85/165 (51.52%), Postives = 113/165 (68.48%), Query Frame = 1
Query:   70 ELVREVLEKPELRLVPHV-GYVSLFPFMEKIIPPDSWILDKQLDLISNRSILWTDYGLRSLAKTSSLYMKHNTEHDPPYWRGPIWMNMNYRILAALYYYSQVNGPYRERAEVIYDELRGNLIRNVVRNYHQTGFLWEQYDQKKGKGKGARLFTGWTALVLLIMGE 561
            E  R     P   LV    GY +LFP M K+IP  S IL   LD I +  ILWT+YGLRS++++S  YM  NTEHDPPYWRG IW+N+NY +L++L +Y+   GPYRE AE I+ ELR NL++N+   + +TGFLWE YD + G+G+G   FTGW++L+LLIM +
Sbjct:  628 EYQRVTSRAPSYTLVSDAFGYNNLFPMMLKLIPSKSPILKSMLDKIRDPKILWTNYGLRSISRSSPYYMARNTEHDPPYWRGYIWINVNYMVLSSLRHYADQPGPYRENAENIFSELRANLVKNLATQFQKTGFLWENYDDRTGEGRGCHPFTGWSSLILLIMSD 792          
BLAST of EY728689 vs. ExPASy Swiss-Prot
Match: MOGS_MOUSE (Mannosyl-oligosaccharide glucosidase OS=Mus musculus GN=Mogs PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.123e-44
Identity = 85/170 (50.00%), Postives = 116/170 (68.24%), Query Frame = 1
Query:   61 PARELVREV-LEKPELRLVPHVGYVSLFPFMEKIIPPDSWILDKQLDLISNRSILWTDYGLRSLAKTSSLYMKHNTEHDPPYWRGPIWMNMNYRILAALYYYSQVNGPYRERAEVIYDELRGNLIRNVVRNYHQTGFLWEQYDQKKGKGKGARLFTGWTALVLLIMGEVY 567
            P + LVR V    P L+ V  +GYVSLFP + +++ P S  L   LD++++   LW+ +GLRSL+ +S  Y + NTEHDPPYWRG +W+N+NY  L AL++Y  V GP++ +A  +Y ELR N++RNV + Y  TGFLWEQY  + G+G G R F GWT+LVLLIM E Y
Sbjct:  665 PPQGLVRVVGRPPPRLQYVDALGYVSLFPLLLQLLDPSSPRLGPLLDVLADSRHLWSPFGLRSLSASSLFYKQRNTEHDPPYWRGAVWLNINYLALGALHHYGHVEGPHKVQAAKLYHELRANVVRNVRQQYQATGFLWEQYSDQDGRGMGCRPFQGWTSLVLLIMAEEY 834          
BLAST of EY728689 vs. ExPASy Swiss-Prot
Match: MOGS_HUMAN (Mannosyl-oligosaccharide glucosidase OS=Homo sapiens GN=MOGS PE=1 SV=5)

HSP 1 Score: 178.718 bits (452), Expect = 3.268e-44
Identity = 84/170 (49.41%), Postives = 117/170 (68.82%), Query Frame = 1
Query:   61 PARELVREV-LEKPELRLVPHVGYVSLFPFMEKIIPPDSWILDKQLDLISNRSILWTDYGLRSLAKTSSLYMKHNTEHDPPYWRGPIWMNMNYRILAALYYYSQVNGPYRERAEVIYDELRGNLIRNVVRNYHQTGFLWEQYDQKKGKGKGARLFTGWTALVLLIMGEVY 567
            P + LVR V   +P+L+ V  +GYVSLFP + +++ P S  L   LD++++   LW+ +GLRSLA +SS Y + N+EHDPPYWRG +W+N+NY  L AL++Y  + GP++ RA  ++ ELR N++ NV R Y  TGFLWEQY  + G+G G R F GWT+LVLL M E Y
Sbjct:  668 PPQGLVRVVGRPQPQLQYVDALGYVSLFPLLLRLLDPTSSRLGPLLDILADSRHLWSPFGLRSLAASSSFYGQRNSEHDPPYWRGAVWLNVNYLALGALHHYGHLEGPHQARAAKLHGELRANVVGNVWRQYQATGFLWEQYSDRDGRGMGCRPFHGWTSLVLLAMAEDY 837          
BLAST of EY728689 vs. ExPASy Swiss-Prot
Match: MOGS_RAT (Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus GN=Mogs PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 7.279e-44
Identity = 84/170 (49.41%), Postives = 116/170 (68.24%), Query Frame = 1
Query:   61 PARELVREVLEKP-ELRLVPHVGYVSLFPFMEKIIPPDSWILDKQLDLISNRSILWTDYGLRSLAKTSSLYMKHNTEHDPPYWRGPIWMNMNYRILAALYYYSQVNGPYRERAEVIYDELRGNLIRNVVRNYHQTGFLWEQYDQKKGKGKGARLFTGWTALVLLIMGEVY 567
            P + LVR V   P  L+ V  +GYVSLFP + +++ P S  L   LD++++   LW+ +GLRSL+ +S  Y + NTEHDPPYWRG +W+N+NY  L AL++Y +V GP++ +A  +Y ELR N++ NV + Y  TGFLWEQY  + G+G G R F GWT+LVLLIM E Y
Sbjct:  665 PPQGLVRVVGRPPARLQYVDALGYVSLFPLLLQLLEPSSPRLGPLLDVLADSRHLWSPFGLRSLSASSLFYKQRNTEHDPPYWRGAVWLNINYLALGALHHYGRVEGPHKVQAAKLYRELRANVVSNVRQQYQATGFLWEQYSDQDGRGMGCRPFQGWTSLVLLIMAEEY 834          
BLAST of EY728689 vs. ExPASy Swiss-Prot
Match: GCS1_SCHPO (Probable mannosyl-oligosaccharide glucosidase OS=Schizosaccharomyces pombe GN=SPAC6G10.09 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.197e-32
Identity = 72/153 (47.06%), Postives = 93/153 (60.78%), Query Frame = 1
Query:  112 VPHVGYVSLFPFMEKIIPPDSWILDKQLDLISNRSILWTDYGLRSLAKTSSLYMKHNTEHDPPYWRGPIWMNMNYRILAALYY-YSQVNGPYRERAEVIYDELRGNLIRNVVRNYHQTGFLWEQYDQKKGKGKGARLFTGWTALVLLIMGEVY 567
            V H GYV+L P M  ++P DS  L   L LI + + LW+ YG+RSL+     +          YWRGPIW+NMNY IL++LY  Y    GP +  A  IY+ELR N++ NV  N+ QTG  WEQYD   GKG+  + FTGWT+LV+ IM E Y
Sbjct:  661 VCHKGYVTLLPMMLGLLPADSGRLTSLLKLIRDENELWSPYGIRSLSMNDVYFGTGEN-----YWRGPIWINMNYLILSSLYQNYINTPGPNQNLARSIYEELRTNVVNNVFENWRQTGIFWEQYDPTTGKGQRTKDFTGWTSLVVNIMSENY 808          
BLAST of EY728689 vs. ExPASy Swiss-Prot
Match: CWH41_YEAST (Mannosyl-oligosaccharide glucosidase OS=Saccharomyces cerevisiae GN=CWH41 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.601e-25
Identity = 67/161 (41.61%), Postives = 95/161 (59.01%), Query Frame = 1
Query:   91 EKPELR-LVPHVGYVSLFPFMEKIIPPDSWILDKQLDLISNRSILWTDYGLRSLAKTSSLYMKHNTEHDPPYWRGPIWMNMNYRILAAL-YYYSQVN---GPYRERAEVIYDELRGNLIRNVVRNYHQTGFLWEQYDQKKGKGKGARLFTGWTALVLLIMG 558
            E  E+R  V H GYVS+ PF  K+IP +S  L+K + L+S+   +++DYGL SL++    + K     D  YWRGPIWMN+NY  L A+ YYY +V          A+ +Y  L+ NL  N+ + + + G+ +E Y    G G GA  FTGWTALV+ I+G
Sbjct:  676 EDDEIREFVCHEGYVSVLPFALKLIPKNSPKLEKVVALMSDPEKIFSDYGLLSLSRQDDYFGK-----DENYWRGPIWMNINYLCLDAMRYYYPEVILDVAGEASNAKKLYQSLKINLSNNIYKVWEEQGYCYENYSPIDGHGTGAEHFTGWTALVVNILG 831          
The following BLAST results are available for this feature:
BLAST of EY728689 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
GCS1_CAEEL1.733e-4551.52Probable mannosyl-oligosaccharide glucosidase OS=C... [more]
MOGS_MOUSE1.123e-4450.00Mannosyl-oligosaccharide glucosidase OS=Mus muscul... [more]
MOGS_HUMAN3.268e-4449.41Mannosyl-oligosaccharide glucosidase OS=Homo sapie... [more]
MOGS_RAT7.279e-4449.41Mannosyl-oligosaccharide glucosidase OS=Rattus nor... [more]
GCS1_SCHPO2.197e-3247.06Probable mannosyl-oligosaccharide glucosidase OS=S... [more]
CWH41_YEAST2.601e-2541.61Mannosyl-oligosaccharide glucosidase OS=Saccharomy... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-007-C05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728689 ID=EY728689; Name=EY728689; organism=Citrus sinensis; type=EST; length=803bp
CACGCGTCCGCAGAAAAGGTTCGTTTAAGTTGGAAAGAAATAAAGGTTGG
AAATAATTATCCAGCTAGAGAGCTTGTTCGGGAAGTATTAGAAAAACCGG
AGTTGAGGTTGGTTCCTCACGTTGGTTATGTCAGCCTTTTTCCTTTTATG
GAGAAGATCATTCCACCTGATTCATGGATCCTGGACAAACAGCTTGATCT
TATTTCTAACAGGAGCATCTTATGGACTGATTATGGACTCCGCTCACTTG
CCAAAACAAGCTCCTTGTACATGAAACACAACACAGAGCATGATCCACCT
TATTGGAGAGGTCCAATTTGGATGAACATGAACTATAGGATTCTTGCTGC
ACTCTATTATTACTCACAAGTGAATGGACCATACAGAGAGAGAGCAGAAG
TCATCTATGATGAATTAAGGGGCAATCTGATTAGGAATGTGGTTCGCAAC
TACCATCAGACTGGGTTTCTGTGGGAACAGTATGATCAGAAGAAGGGTAA
GGGAAAAGGCGCACGTCTGTTCACTGGTTGGACAGCGCTTGTGCTATTGA
TTATGGGTGAAGTTTATGGTGAAACTTAAATTCCAAGTCAATATAGAAGA
TTTTTCTAACAGAAAGGGAACGCGTTNAATACTTCAAACCTCTGAGAAAC
CATGTACCAATATTCATTAAAGTGGGTAATTTTATGGCAGCAGTTCTGTT
CAATCTGGATGGTAGCACATTCTTTGGGTATGATAAGAATCTTATAGGAG
AGAAATTAAAGGCTGGTGGATCTTCTGGGACTCATGTTTTGTAACAGGTT
ATC
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