EY677704

Overview
NameEY677704
Unique NameEY677704
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1035
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY677704 vs. ExPASy Swiss-Prot
Match: LEUNG_ARATH (Transcriptional corepressor LEUNIG OS=Arabidopsis thaliana GN=LUG PE=1 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 1.189e-34
Identity = 68/85 (80.00%), Postives = 75/85 (88.24%), Query Frame = 1 
Query:  187 SNWEADKMLDVYIYDYLVKKKLHNTAKSFMTEGKVAPDPVAIDAPGGFLFEWWSVFWDIFIARTNEKHSEPAASYIEAQQIKTKE 441
            +NWEADKMLDVYI+DYLVK+ L  TA++F  EGKV+ DPVAIDAPGGFLFEWWSVFWDIFIARTNEKHSE AASYIE Q IK +E
Sbjct:    4 TNWEADKMLDVYIHDYLVKRDLKATAQAFQAEGKVSSDPVAIDAPGGFLFEWWSVFWDIFIARTNEKHSEVAASYIETQMIKARE 88
The following BLAST results are available for this feature:
BLAST of EY677704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
LEUNG_ARATH1.189e-3480.00Transcriptional corepressor LEUNIG OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-043-G07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY677704 ID=EY677704; Name=EY677704; organism=Citrus sinensis; type=EST; length=1035bp
CCACGCGTCCGCCCACGCGTCCGGGCTCCTAGTTGATTTACTCAACGCAG
GTCCAGTACCAATGCTTGATCAGCTAAGATCGTTGTAGAATAAAGCTTAG
GATTGCTAATATTTGCTTTGATCCATCTAAATTTTTGAATTTGAGATAAT
TTGTTTGATTGAGTGGAAACAATGGCGCAGCAAAGCAGTAACTGGGAAGC
CGATAAGATGCTTGATGTGTACATTTATGATTATTTGGTGAAGAAAAAAT
TGCATAACACTGCAAAGTCCTTCATGACCGAAGGAAAAGTCGCCCCAGAT
CCTGTAGCAATTGATGCCCCTGGAGGGTTTCTTTTTGAATGGTGGTCTGT
ATTTTGGGATATATTTATTGCAAGGACAAATGAGAAGCATTCCGAGCCAG
CTGCCTCATATATTGAGGCGCAACAAATCAAAACAAAAGAGCAGCAACAG
TTGCAAATGCAGCAGTTGCATCTAATGCGAGCTCAAATGCAACAAAGGAA
CCCAATCATCCTTCCCTAGGTGGAGCAGTAAATTCTGTGAATTCTGAAGG
ATGGGTAGGGCAATCAAATGCTAGTGCATTGGGCGGCAAAAATGTATGAA
AAACCGCATGAAACCTAAACCACTCAATGGGGAAATTCATGGGGGTCAAA
AAATTCCCCACCCCCTTTCTTGGAGGCTAGGGAGGGGCCTTTCCCCAAAA
CCACTAAACCATCCCGGGGTCGTTTGGGGCCAAGGGGAAAATCGGGGAAG
GGGTAAAAGGCCGCCCCGGCCCCCAAAATTTTCGGGCCCGGGGCCCCCAA
AAAAACCCCCCAAAATCTAAAGGGGGAAAATAAAACCGGGGGGGCCACCT
ATAAAAAAATATTTTTGCCCCTGGGAGATCCCCCCCTCTCCCTTTTTTTA
ATAGGCGGGGGGAAATCCTGGTGCGCCCAAAAAAAAACCCCAAGAAATAA
AGAAAAGAAAAGGGGCGGGGGGGATGTGGGGCCCCCCCGCGGGGGGGAGG
GTGGGGGGGGGGGGGGTTTCTCCCCCCCCCCGCCC
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