EY680438

Overview
NameEY680438
Unique NameEY680438
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length746
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680438 vs. ExPASy Swiss-Prot
Match: BI1L_ARATH (BI1-like protein OS=Arabidopsis thaliana GN=At4g15470 PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 6.004e-58
Identity = 117/193 (60.62%), Postives = 133/193 (68.91%), Query Frame = 1
Query:    1 LTTLVSSITVLYNPINDXXXXXXXXXXXXXXXXXXXXXXXHVYHQKHPVNLIVLGLFTVSLSLPVAVSCANTDGRIVLEALILTSAVVCSLTGYTFWASKKGKDFSFLGPXXXXXXXXXXXXXXMQMFFPLGSTSTAVYGGITALVFCGYIVYDTDNLIKRFTYDDYILASVTLYLDIRTFSSSILRGLKSSN 579
            LTTL+S++ VL  P+ND                       H+YHQKHPVNLI+L LFTVSLS  V VSCA T+GRIVL+ALILT +VV SLT YTFWA+KKGKDFSFLGP              +QMFFPLG TS AVYGG +ALVFCGYIVYDTDNLIKRFTYD+YILASV LYLDI     +ILR L+  +
Sbjct:   63 LTTLISAVVVLNPPVNDLLTGSPGILLFLCIVPFILIWPLHIYHQKHPVNLILLALFTVSLSFTVGVSCAMTEGRIVLQALILTLSVVGSLTAYTFWAAKKGKDFSFLGPILFTSLIILVVTSFIQMFFPLGPTSVAVYGGFSALVFCGYIVYDTDNLIKRFTYDEYILASVALYLDILNLFLTILRILRQGD 255          
BLAST of EY680438 vs. ExPASy Swiss-Prot
Match: TMBI4_MOUSE (Transmembrane BAX inhibitor motif-containing protein 4 OS=Mus musculus GN=Tmbim4 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.767e-17
Identity = 51/152 (33.55%), Postives = 85/152 (55.92%), Query Frame = 1
Query:  124 VYHQKHPVNLIVLGLFTVSLSLPVAVSCANTDGRIVLEALILTSAVVCSLTGYTFWASKKGKDFSFLGPXXXXXXXXXXXXXXMQMFFPLGSTSTAVYGGITALVFCGYIVYDTDNLIKRFTYDDYILASVTLYLDIRTFSSSILRGLKSSN 579
            ++   HP+NL +L  FT+S SL VA      D  +VL+A I+T+AV   LT YT  + +   DF+  G               +++FF    T   V   + AL+FCG+I+YDT +L+ R + ++Y++A+++LY+DI      +L+ L++ N
Sbjct:   89 LHRHTHPLNLYLLFAFTLSESLAVAAVVTFYDVYLVLQAFIMTTAVFLGLTAYTLQSKR---DFTKFGAGLFAGLWILCLAGFLKLFF-YSETMELVLASLGALLFCGFIIYDTHSLMHRLSPEEYVIAAISLYMDIINLFLHLLKFLEAVN 236          
BLAST of EY680438 vs. ExPASy Swiss-Prot
Match: TMBI4_HUMAN (Transmembrane BAX inhibitor motif-containing protein 4 OS=Homo sapiens GN=TMBIM4 PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.654e-15
Identity = 53/148 (35.81%), Postives = 80/148 (54.05%), Query Frame = 1
Query:  136 KHPVNLIVLGLFTVSLSLPVAVSCANTDGRIVLEALILTSAVVCSLTGYTFWASKKGKDFSFLGPXXXXXXXXXXXXXXMQMFFPLGSTSTAVYGGITALVFCGYIVYDTDNLIKRFTYDDYILASVTLYLDIRTFSSSILRGLKSSN 579
            K+P+NL +L  FT+  +L VAV     D  I+L+A ILT+ V   LT YT  + K   DFS  G               ++ FF        V     AL+FCG+I+YDT +L+ + + ++Y+LA+++LYLDI      +LR L++ N
Sbjct:   93 KYPLNLYLLFGFTLLEALTVAVVVTFYDVYIILQAFILTTTVFFGLTVYTLQSKK---DFSKFGAGLFALLWILCLSGFLKFFF-YSEIMELVLAAAGALLFCGFIIYDTHSLMHKLSPEEYVLAAISLYLDIINLFLHLLRFLEAVN 236          
BLAST of EY680438 vs. ExPASy Swiss-Prot
Match: YQE4_SCHPO (Uncharacterized membrane protein C576.04 OS=Schizosaccharomyces pombe GN=SPCC576.04 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.504e-13
Identity = 46/141 (32.62%), Postives = 70/141 (49.65%), Query Frame = 1
Query:  139 HPVNLIVLGLFTVSLSLPVAVSCANTDGRIVLEALILTSAVVCSLTGYTFWASKKGKDFSFLGPXXXXXXXXXXXXXXMQMFFPLGSTSTAVYGGITALVFCGYIVYDTDNLIKRFTYDDYILASVTLYLDIRTFSSSILR 561
            +P N I L LFT    L +  +      RI+LEA+ +T  V  +LT +TF +     DFS LG               +  F P        + G   LVFCGYI++DT N++ R++ +++I++S+ LYLD       IL+
Sbjct:  118 YPRNYIFLFLFTALEGLTLGTAITFFSARIILEAVFITLGVFVALTAFTFQSKW---DFSRLGGFLYVSLWSLILTPLIFFFVPSTPFIDMAFAGFGTLVFCGYILFDTYNILHRYSPEEFIMSSLMLYLDFINLFIRILQ 255          
BLAST of EY680438 vs. ExPASy Swiss-Prot
Match: TMBI4_CAEEL (Transmembrane BAX inhibitor motif-containing protein 4 OS=Caenorhabditis elegans GN=tmbi-4 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.892e-11
Identity = 47/153 (30.72%), Postives = 74/153 (48.37%), Query Frame = 1
Query:  121 HVYHQKHPVNLIVLGLFTVSLSLPVAVSCANTDGRIVLEALILTSAVVCSLTGYTFWASKKGKDFSFLGPXXXXXXXXXXXXXXMQMFFPLGSTSTAVYGGITALVFCGYIVYDTDNLIKRFTYDDYILASVTLYLDIRTFSSSILRGLKSSN 579
            HVY ++ P+N ++L  FT   ++ +       + ++VLEA ++T  VV SL  YT    +  +DFS                   QMFF +      V     A +FC  +V D D ++ RF+ +DYI A V+LY+DI      IL+ +  +N
Sbjct:  127 HVYAREVPLNYVLLAAFTAVQAVTMGCVVTLFEAKVVLEAAVITGLVVASLFAYTL---QNKRDFSVGYASMGSLLCVLLWAGIFQMFF-MSPAVNFVINVFGAGLFCVLLVIDLDMIMYRFSPEDYICACVSLYMDILNLFIRILQIVAEAN 275          
The following BLAST results are available for this feature:
BLAST of EY680438 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
BI1L_ARATH6.004e-5860.62BI1-like protein OS=Arabidopsis thaliana GN=At4g15... [more]
TMBI4_MOUSE1.767e-1733.55Transmembrane BAX inhibitor motif-containing prote... [more]
TMBI4_HUMAN1.654e-1535.81Transmembrane BAX inhibitor motif-containing prote... [more]
YQE4_SCHPO4.504e-1332.62Uncharacterized membrane protein C576.04 OS=Schizo... [more]
TMBI4_CAEEL1.892e-1130.72Transmembrane BAX inhibitor motif-containing prote... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-011-A12-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680438 ID=EY680438; Name=EY680438; organism=Citrus sinensis; type=EST; length=746bp
TTGACCACCTTGGTCTCCTCAATCACCGTTCTTTACAATCCCATCAACGA
TCTTCTCAGGGGCAATTCTGGCCTTCTCCTCTTCCTTTCCATCCTCCCCT
TCATCCTGTTATGGCCACTGCATGTGTATCATCAGAAGCACCCTGTGAAC
TTGATTGTCCTTGGTCTCTTCACTGTATCTCTGAGTCTTCCTGTTGCTGT
AAGCTGCGCTAATACTGATGGTAGGATTGTGCTTGAAGCATTAATTCTGA
CCTCGGCTGTGGTTTGTTCTTTAACTGGGTACACTTTCTGGGCCTCTAAG
AAGGGCAAAGATTTCAGCTTTCTTGGACCAATTCTATTCACCAGCCTCAT
AATCCTCATTCTGACTAGCTTTATGCAGATGTTCTTTCCTCTGGGATCTA
CGTCCACTGCTGTTTATGGTGGAATTACTGCACTGGTCTTCTGTGGATAC
ATCGTTTACGACACTGACAACTTGATCAAGCGCTTCACATATGATGATTA
TATTTTGGCCTCTGTCACTCTCTATCTGGATATCCGAACCTTTTCATCCT
CCATTTTGCGGGGGCTGAAATCATCAAATGGTTAATTGAACAGTGGTCCA
CCCCAAGAACGAAATCCTTTGGGGAATCCCCTTATGGGGCTACATATTGG
GTTTGGCCAACACCCAAAACAAAATTTCGAAAACAAGGTAATTGAAAAAA
TAATAAATTCCTTCGAAATCTTAAATCCCTTAAACACTGCCCCCCC
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