EY680436
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY680436 vs. ExPASy Swiss-Prot
Match: DMI1_MEDTR (Putative ion channel DMI-1 OS=Medicago truncatula GN=DMI1 PE=2 SV=1) HSP 1 Score: 289.271 bits (739), Expect = 1.750e-77 Identity = 146/160 (91.25%), Postives = 155/160 (96.88%), Query Frame = 2 Query: 2 KRLPYRDTKPTSLRLSGFSHSSWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYVLSNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIKPAEFYLFDQEEISFFDIMIRGRQRQEIVIGYRLANTERAIINPSQKSEPRKWSLDDVFVVISSGD 481 +RLPYRDTK TSLRLSGFSH+SWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYVLSNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIKPAEFYLFDQEE+ F+DIMIRGR R+EIVIGYRLAN ERAIINPS+KS PRKWSLDDVFVV++SG+ Sbjct: 723 RRLPYRDTKSTSLRLSGFSHNSWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYVLSNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIKPAEFYLFDQEELCFYDIMIRGRTRKEIVIGYRLANQERAIINPSEKSVPRKWSLDDVFVVLASGE 882
BLAST of EY680436 vs. ExPASy Swiss-Prot
Match: POLLU_LOTJA (Putative ion channel POLLUX, chloroplastic OS=Lotus japonicus GN=POLLUX PE=1 SV=1) HSP 1 Score: 282.337 bits (721), Expect = 2.140e-75 Identity = 143/160 (89.38%), Postives = 152/160 (95.00%), Query Frame = 2 Query: 2 KRLPYRDTKPTSLRLSGFSHSSWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYVLSNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIKPAEFYLFDQEEISFFDIMIRGRQRQEIVIGYRLANTERAIINPSQKSEPRKWSLDDVFVVISSGD 481 +RLPY+DTK TSLRLSGFSH+SWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYVLSNELVSMALAMVAEDKQINRVLEELFAE+GNEMCIKPAEFYLFDQEE+ F+DIMIRGR RQEI+IGYRLAN ERAIINPS+K RKWSL DVFVVI+SGD Sbjct: 758 RRLPYKDTKSTSLRLSGFSHNSWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYVLSNELVSMALAMVAEDKQINRVLEELFAEQGNEMCIKPAEFYLFDQEELCFYDIMIRGRARQEIIIGYRLANQERAIINPSEKLVARKWSLGDVFVVIASGD 917
BLAST of EY680436 vs. ExPASy Swiss-Prot
Match: DMI1_ORYSJ (Probable ion channel DMI1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0870100 PE=2 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 6.240e-67 Identity = 130/157 (82.80%), Postives = 144/157 (91.72%), Query Frame = 2 Query: 2 KRLPYRDTKPTSLRLSGFSHSSWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYVLSNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIKPAEFYLFDQEEISFFDIMIRGRQRQEIVIGYRLANTERAIINPSQKSEPRKWSLDDVFVVIS 472 KRLP ++ K + LR +GF HSSWIREMQ ASDKSIIISEILDSRTRNLVSVS+ISDYVLSNELVSMALAMVAEDKQINRVLEELFAEEGNEMCI+ AEFYL++QEE+SFFDIM+R R+R E+VIGYRLAN ++AIINP QKSE RKWSLDDVFVVIS Sbjct: 785 KRLPSKELK-SPLRYNGFCHSSWIREMQHASDKSIIISEILDSRTRNLVSVSKISDYVLSNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIRSAEFYLYEQEELSFFDIMVRARERDEVVIGYRLANDDQAIINPEQKSEIRKWSLDDVFVVIS 940
BLAST of EY680436 vs. ExPASy Swiss-Prot
Match: DMI1_ARATH (Putative ion channel DMI1 OS=Arabidopsis thaliana GN=At5g49960 PE=3 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 4.045e-66 Identity = 123/158 (77.85%), Postives = 145/158 (91.77%), Query Frame = 2 Query: 2 KRLPYRDTKPTSLRLSGFSHSSWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYVLSNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIKPAEFYLFDQEEISFFDIMIRGRQRQEIVIGYRLANTERAIINPSQKSEPRKWSLDDVFVVISS 475 KRLPY+D K ++LR+SGF + WIR+MQQASDKSI+ISEILDSRT+NLVSVSRISDYVLSNELVSMALAMVAEDKQINRVL+ELFAE+GNE+CI+PAEFY++DQEE+ F+DIM R RQRQEI+IGYRLA E+A+INP+ KS+ KWSLDDVFVVI+S Sbjct: 665 KRLPYKDAKSSALRISGFPNCCWIRKMQQASDKSIVISEILDSRTKNLVSVSRISDYVLSNELVSMALAMVAEDKQINRVLKELFAEKGNELCIRPAEFYIYDQEEVCFYDIMRRARQRQEIIIGYRLAGMEQAVINPTDKSKLTKWSLDDVFVVIAS 822
BLAST of EY680436 vs. ExPASy Swiss-Prot
Match: DMI1L_ORYSJ (Probable ion channel DMI1-like, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0843600 PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 2.460e-55 Identity = 108/157 (68.79%), Postives = 130/157 (82.80%), Query Frame = 2 Query: 2 KRLPYRDTKPTSLRLSGFSHSSWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYVLSNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIKPAEFYLFDQEEISFFDIMIRGRQRQEIVIGYRLANTERAIINPSQKSEPRKWSLDDVFVVIS 472 KRLP+R+ + + F SWI EMQQASDKS+IISEILD RT+NL+SVS+ISDYVLSNELVSMALAMVAED+QIN VLEELFAE+GNEM I+PA+ YL + EE++FF++M+RGRQR+EIVIGYRL + ERAIINP K R+WS DVFVVI+ Sbjct: 734 KRLPFREAMVSHVTRGSFCEGSWIGEMQQASDKSVIISEILDPRTKNLLSVSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEQGNEMQIRPADLYLREDEELNFFEVMLRGRQRKEIVIGYRLVDAERAIINPPDKVSRRRWSAKDVFVVIT 890
BLAST of EY680436 vs. ExPASy Swiss-Prot
Match: CASTO_LOTJA (Putative ion channel CASTOR, chloroplastic OS=Lotus japonicus GN=CASTOR PE=1 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 3.324e-52 Identity = 107/157 (68.15%), Postives = 130/157 (82.80%), Query Frame = 2 Query: 2 KRLPYRDTKPTSLRLSGFSHSSWIREMQQASDKSIIISEILDSRTRNLVSVSRISDYVLSNELVSMALAMVAEDKQINRVLEELFAEEGNEMCIKPAEFYLFDQEEISFFDIMIRGRQRQEIVIGYRLANTERAIINPSQKSEPRKWSLDDVFVVIS 472 +RLPY + + FS SWI EM+QASDK++IISEILD RT+NL+S+S+ISDYVLSNELVSMALAMVAED+QIN VLEELFAEEGNEM I+ A+ YL + EE+SF++IM+R RQR+EI+IGYRLAN ERA+INP K+ RKWSL DVFVVI+ Sbjct: 695 RRLPYV-AMASQTQGGNFSKGSWIGEMKQASDKTVIISEILDPRTKNLLSMSKISDYVLSNELVSMALAMVAEDRQINDVLEELFAEEGNEMHIRQADIYLREGEEMSFYEIMLRARQRREILIGYRLANAERAVINPPAKTGRRKWSLKDVFVVIT 850 The following BLAST results are available for this feature:
BLAST of EY680436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY680436 ID=EY680436; Name=EY680436; organism=Citrus sinensis; type=EST; length=811bpback to top |