FC871437

Overview
NameFC871437
Unique NameFC871437
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length674
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig613 contig Csv1_Contig613:305..978. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC871437 vs. ExPASy Swiss-Prot
Match: AAP3_ARATH (Amino acid permease 3 OS=Arabidopsis thaliana GN=AAP3 PE=1 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.197e-35
Identity = 68/97 (70.10%), Postives = 77/97 (79.38%), Query Frame = 2
Query:    2 LVWRTIFVILTTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIPKWSTKWLCLQILSVACLXXXXXXXXXXXXXXXXDLKSYKPFSTSY 292
            L+WRT+FVI+TTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIP+WST+W+CLQ+ S+ CL                DLKSYKPF + Y
Sbjct:  380 LIWRTVFVIITTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIPRWSTRWVCLQVFSLGCLVVSIAAAAGSIAGVLLDLKSYKPFRSEY 476          
BLAST of FC871437 vs. ExPASy Swiss-Prot
Match: AAP5_ARATH (Amino acid permease 5 OS=Arabidopsis thaliana GN=AAP5 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.262e-33
Identity = 63/97 (64.95%), Postives = 73/97 (75.26%), Query Frame = 2
Query:    2 LVWRTIFVILTTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIPKWSTKWLCLQILSVACLXXXXXXXXXXXXXXXXDLKSYKPFSTSY 292
            LVWRT FV+ TT+ISML+PFFNDVVGLLGA+GFWPLTVYFPVEMYIAQK +P+W TKW+CLQ+LSV CL                DLK YKPF + +
Sbjct:  384 LVWRTFFVMTTTLISMLMPFFNDVVGLLGAIGFWPLTVYFPVEMYIAQKNVPRWGTKWVCLQVLSVTCLFVSVAAAAGSVIGIVSDLKVYKPFQSEF 480          
BLAST of FC871437 vs. ExPASy Swiss-Prot
Match: AAP2_ARATH (Amino acid permease 2 OS=Arabidopsis thaliana GN=AAP2 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.051e-31
Identity = 62/97 (63.92%), Postives = 75/97 (77.32%), Query Frame = 2
Query:    2 LVWRTIFVILTTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIPKWSTKWLCLQILSVACLXXXXXXXXXXXXXXXXDLKSYKPFSTSY 292
            +V+R+ FV+ TTVISML+PFFNDVVG+LGALGFWPLTVYFPVEMYI Q+K+ KWST+W+CLQ+LSVACL                DLK YKPF ++Y
Sbjct:  397 MVYRSGFVVTTTVISMLMPFFNDVVGILGALGFWPLTVYFPVEMYIKQRKVEKWSTRWVCLQMLSVACLVISVVAGVGSIAGVMLDLKVYKPFKSTY 493          
BLAST of FC871437 vs. ExPASy Swiss-Prot
Match: AAP4_ARATH (Amino acid permease 4 OS=Arabidopsis thaliana GN=AAP4 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.583e-30
Identity = 61/96 (63.54%), Postives = 72/96 (75.00%), Query Frame = 2
Query:    5 VWRTIFVILTTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIPKWSTKWLCLQILSVACLXXXXXXXXXXXXXXXXDLKSYKPFSTSY 292
            V+R+ FV+LTTVISML+PFFNDVVG+LGALGFWPLTVYFPVEMYI Q+K+ +WS KW+CLQ+LS  CL                DLK YKPF T+Y
Sbjct:  371 VYRSGFVVLTTVISMLMPFFNDVVGILGALGFWPLTVYFPVEMYIRQRKVERWSMKWVCLQMLSCGCLMITLVAGVGSIAGVMLDLKVYKPFKTTY 466          
BLAST of FC871437 vs. ExPASy Swiss-Prot
Match: AAP1_ARATH (Amino acid permease 1 OS=Arabidopsis thaliana GN=AAP1 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.058e-23
Identity = 47/97 (48.45%), Postives = 65/97 (67.01%), Query Frame = 2
Query:    2 LVWRTIFVILTTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIPKWSTKWLCLQILSVACLXXXXXXXXXXXXXXXXDLKSYKPFSTSY 292
            LVWRT +V++TTV++M+ PFFN ++GL+GA  FWPLTVYFPVEM+IAQ KI K+S +W+ L+ +   CL                 +K+YKPF T +
Sbjct:  388 LVWRTAYVVITTVVAMIFPFFNAILGLIGAASFWPLTVYFPVEMHIAQTKIKKYSARWIALKTMCYVCLIVSLLAAAGSIAGLISSVKTYKPFRTMH 484          
BLAST of FC871437 vs. ExPASy Swiss-Prot
Match: AAP6_ARATH (Amino acid permease 6 OS=Arabidopsis thaliana GN=AAP6 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.216e-23
Identity = 49/93 (52.69%), Postives = 62/93 (66.67%), Query Frame = 2
Query:    2 LVWRTIFVILTTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIPKWSTKWLCLQILSVACLXXXXXXXXXXXXXXXXDLKSYKPF 280
            LVWRT +V++T V++M+ PFFND +GL+GA  FWPLTVYFP+EM+IAQKKIPK+S  W  L+ILS  C                  LK +KPF
Sbjct:  386 LVWRTSYVVVTAVVAMIFPFFNDFLGLIGAASFWPLTVYFPIEMHIAQKKIPKFSFTWTWLKILSWTCFIVSLVAAAGSVQGLIQSLKDFKPF 478          
BLAST of FC871437 vs. ExPASy Swiss-Prot
Match: AAP8_ARATH (Amino acid permease 8 OS=Arabidopsis thaliana GN=AAP8 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.813e-23
Identity = 48/93 (51.61%), Postives = 62/93 (66.67%), Query Frame = 2
Query:    2 LVWRTIFVILTTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIPKWSTKWLCLQILSVACLXXXXXXXXXXXXXXXXDLKSYKPF 280
            LVWRT +V+LTT ++M+ PFFN ++GLLGA  FWPLTVYFPV M+IAQ K+ K+S +WL L +L + CL                 +KSYKPF
Sbjct:  379 LVWRTCYVVLTTFVAMIFPFFNAILGLLGAFAFWPLTVYFPVAMHIAQAKVKKYSRRWLALNLLVLVCLIVSALAAVGSIIGLINSVKSYKPF 471          
BLAST of FC871437 vs. ExPASy Swiss-Prot
Match: AAP7_ARATH (Probable amino acid permease 7 OS=Arabidopsis thaliana GN=AAP7 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.625e-16
Identity = 36/66 (54.55%), Postives = 51/66 (77.27%), Query Frame = 2
Query:   11 RTIFVILTTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIPKWSTKWLCLQILSVACL 208
            RT++V++TT ++++ P+FN+V+G++GAL FWPL VYFPVEM I QKKI  W+  WL L+  S  CL
Sbjct:  382 RTMYVLITTGVAVMFPYFNEVLGVVGALAFWPLAVYFPVEMCILQKKIRSWTRPWLLLRGFSFVCL 447          
The following BLAST results are available for this feature:
BLAST of FC871437 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
AAP3_ARATH1.197e-3570.10Amino acid permease 3 OS=Arabidopsis thaliana GN=A... [more]
AAP5_ARATH7.262e-3364.95Amino acid permease 5 OS=Arabidopsis thaliana GN=A... [more]
AAP2_ARATH3.051e-3163.92Amino acid permease 2 OS=Arabidopsis thaliana GN=A... [more]
AAP4_ARATH2.583e-3063.54Amino acid permease 4 OS=Arabidopsis thaliana GN=A... [more]
AAP1_ARATH3.058e-2348.45Amino acid permease 1 OS=Arabidopsis thaliana GN=A... [more]
AAP6_ARATH5.216e-2352.69Amino acid permease 6 OS=Arabidopsis thaliana GN=A... [more]
AAP8_ARATH6.813e-2351.61Amino acid permease 8 OS=Arabidopsis thaliana GN=A... [more]
AAP7_ARATH1.625e-1654.55Probable amino acid permease 7 OS=Arabidopsis thal... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAK1AC01FM2 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK1AC01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871437 ID=FC871437; Name=FC871437; organism=Citrus sinensis; type=EST; length=674bp
GTTGGTTTGGAGGACAATTTTTGTCATCTTAACAACTGTGATTTCAATGC
TTCTCCCATTCTTTAACGACGTTGTTGGTCTCCTCGGAGCTCTAGGATTT
TGGCCACTTACAGTTTACTTCCCTGTTGAGATGTATATTGCGCAAAAGAA
GATACCAAAGTGGAGCACAAAATGGCTTTGTCTCCAAATCCTAAGCGTAG
CTTGCCTAATAATCACCATAGCTGCAGCGGCTGGCTCTATTGCAGGAGTT
GTTACTGACCTTAAGTCTTATAAGCCCTTCAGCACCAGCTACTAATTCAG
TCTGATTACAAATGGAAGTAGCCATTGATGATGTTCGACAAGGAAAAGGA
TCAATCATTAGACTTTTCAGTTCTTGTTCATGTTAATATGTCAAGTGCAT
AAACCGGCCATGTTACTGCTATTTTCATTAGCTCTCCGTTGTTTCTTTGC
CCTTCTCATCACAAACAAAAGCAGGACCATGTATCTGTGCATAGGAGTCC
TCAAGATTTGAACAATGTAACGTTGTCCATTTTCCAAATGCAAAATAGAA
AAATTTAAACCAAGTTGCTGGCTTATATATCTTTTGTTTTTGCATGATTA
CAACAAGCACTTAATAAAAGTATGGGCCACCGAGCAACAGGCAAATAATT
GGAAGGAAAAAAAAAAAAAAAAAA
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