EY679855

Overview
NameEY679855
Unique NameEY679855
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length453
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10229 contig Csv1_Contig10229:586..1015. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY679855 vs. ExPASy Swiss-Prot
Match: PSBP1_ARATH (Oxygen-evolving enhancer protein 2-1, chloroplastic OS=Arabidopsis thaliana GN=PSBP1 PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 6.831e-30
Identity = 65/79 (82.28%), Postives = 71/79 (89.87%), Query Frame = 3
Query:   12 VATANILEASVRP----PYYFLSVLTRTADGDEGGKHQLITATVKGGKLYICKAQAGDKRWFKGARKYVKSTASSFSVA 236
            VATANILE+S +     PYY+LSVLTRTADGDEGGKHQLITATV GGKLYICKAQAGDKRWFKGARK+V+S A+SFSVA
Sbjct:  185 VATANILESSSQEVGGKPYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQAGDKRWFKGARKFVESAATSFSVA 263          
BLAST of EY679855 vs. ExPASy Swiss-Prot
Match: PSBP_SINAL (Oxygen-evolving enhancer protein 2, chloroplastic OS=Sinapis alba GN=PSBP PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 5.783e-29
Identity = 62/79 (78.48%), Postives = 69/79 (87.34%), Query Frame = 3
Query:   12 VATANILEASVRP----PYYFLSVLTRTADGDEGGKHQLITATVKGGKLYICKAQAGDKRWFKGARKYVKSTASSFSVA 236
            VATANILE +++     PYY+LSVLTRTADGDEGGKHQLITATV GGKLYICKAQAGDKRWFKGA K+V+  A+SFSVA
Sbjct:  182 VATANILETNIQDVGGKPYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQAGDKRWFKGANKFVEKAATSFSVA 260          
BLAST of EY679855 vs. ExPASy Swiss-Prot
Match: PSBP2_ARATH (Putative oxygen-evolving enhancer protein 2-2 OS=Arabidopsis thaliana GN=PSBP2 PE=5 SV=3)

HSP 1 Score: 125.561 bits (314), Expect = 9.864e-29
Identity = 63/79 (79.75%), Postives = 69/79 (87.34%), Query Frame = 3
Query:   12 VATANILEASVRP----PYYFLSVLTRTADGDEGGKHQLITATVKGGKLYICKAQAGDKRWFKGARKYVKSTASSFSVA 236
            VATANILE S +      YY+LSVLTRTADGDEGGKHQLITATV GGKLYICKAQAGDKRWFKGARK+V++ A+SFSVA
Sbjct:   47 VATANILETSTQEIGGKEYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQAGDKRWFKGARKFVENAATSFSVA 125          
BLAST of EY679855 vs. ExPASy Swiss-Prot
Match: PSBP_PEA (Oxygen-evolving enhancer protein 2, chloroplastic OS=Pisum sativum GN=PSBP PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.895e-28
Identity = 64/82 (78.05%), Postives = 68/82 (82.93%), Query Frame = 3
Query:    3 TRPVATANILEASVR----PPYYFLSVLTRTADGDEGGKHQLITATVKGGKLYICKAQAGDKRWFKGARKYVKSTASSFSVA 236
            T  VA ANILE+S        YY +SVLTRTADGDEGGKHQLITATVK GKLYICKAQAGDKRWFKGARK+V+ TASSFSVA
Sbjct:  178 TNAVAVANILESSAPVIGGKQYYNISVLTRTADGDEGGKHQLITATVKDGKLYICKAQAGDKRWFKGARKFVEDTASSFSVA 259          
BLAST of EY679855 vs. ExPASy Swiss-Prot
Match: PSBP_CUCSA (Oxygen-evolving enhancer protein 2, chloroplastic OS=Cucumis sativus GN=PSBP PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.895e-28
Identity = 63/79 (79.75%), Postives = 67/79 (84.81%), Query Frame = 3
Query:   12 VATANILEASVR----PPYYFLSVLTRTADGDEGGKHQLITATVKGGKLYICKAQAGDKRWFKGARKYVKSTASSFSVA 236
            VATANILEA+        YYF+SVLTRTADGDEGGKHQLITATV  GKLYICKAQAGDKRWFKGARK+V+  ASSFSVA
Sbjct:  185 VATANILEATASNVNGKDYYFVSVLTRTADGDEGGKHQLITATVNDGKLYICKAQAGDKRWFKGARKFVEGAASSFSVA 263          
BLAST of EY679855 vs. ExPASy Swiss-Prot
Match: PSBP_BRAJU (Oxygen-evolving enhancer protein 2, chloroplastic (Fragment) OS=Brassica juncea GN=PSBP PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.895e-28
Identity = 61/79 (77.22%), Postives = 68/79 (86.08%), Query Frame = 3
Query:   12 VATANILEASVRP----PYYFLSVLTRTADGDEGGKHQLITATVKGGKLYICKAQAGDKRWFKGARKYVKSTASSFSVA 236
            VATANILE +++     PYY+LSVLTRTAD DEGGKHQLITATV GGKLYICKAQAGDKRWFKGA K+V+  A+SFSVA
Sbjct:  139 VATANILETNIQDVGGKPYYYLSVLTRTADEDEGGKHQLITATVNGGKLYICKAQAGDKRWFKGANKFVEKAATSFSVA 217          
BLAST of EY679855 vs. ExPASy Swiss-Prot
Match: PSBP_SOLTU (Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum tuberosum GN=PSBP PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 3.173e-27
Identity = 60/79 (75.95%), Postives = 68/79 (86.08%), Query Frame = 3
Query:   12 VATANILEASVRP----PYYFLSVLTRTADGDEGGKHQLITATVKGGKLYICKAQAGDKRWFKGARKYVKSTASSFSVA 236
            VATAN+LEAS        YY+LSVLTRTADGDEGGKHQLITATV  GKLYICKAQAGDKRWFKGA+K+V++ A+SFS+A
Sbjct:  182 VATANLLEASSATVGGKQYYYLSVLTRTADGDEGGKHQLITATVNDGKLYICKAQAGDKRWFKGAKKFVENAATSFSIA 260          
BLAST of EY679855 vs. ExPASy Swiss-Prot
Match: PSBP1_TOBAC (Oxygen-evolving enhancer protein 2-1, chloroplastic OS=Nicotiana tabacum GN=PSBP1 PE=3 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 3.173e-27
Identity = 61/79 (77.22%), Postives = 67/79 (84.81%), Query Frame = 3
Query:   12 VATANILEASVRP----PYYFLSVLTRTADGDEGGKHQLITATVKGGKLYICKAQAGDKRWFKGARKYVKSTASSFSVA 236
            VATAN+LE S        YY LSVLTRTADGDEGGKHQLI+ATV GGKLYICKAQAGDKRWFKGARK+V++ A+SFSVA
Sbjct:  190 VATANLLETSSSTVGGKEYYILSVLTRTADGDEGGKHQLISATVNGGKLYICKAQAGDKRWFKGARKFVENAATSFSVA 268          
BLAST of EY679855 vs. ExPASy Swiss-Prot
Match: PSBP2_TOBAC (Oxygen-evolving enhancer protein 2-2, chloroplastic OS=Nicotiana tabacum GN=PSBP2 PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 7.069e-27
Identity = 59/79 (74.68%), Postives = 68/79 (86.08%), Query Frame = 3
Query:   12 VATANILEASVRP----PYYFLSVLTRTADGDEGGKHQLITATVKGGKLYICKAQAGDKRWFKGARKYVKSTASSFSVA 236
            VA AN+LE S       PYY+LSVLTRTADG+EGGKHQLITATV  GKLYICKAQAGDKRWFKGA+K+V++TA+SFS+A
Sbjct:  187 VAIANVLETSSAEVGGKPYYYLSVLTRTADGNEGGKHQLITATVNDGKLYICKAQAGDKRWFKGAKKFVENTATSFSLA 265          
BLAST of EY679855 vs. ExPASy Swiss-Prot
Match: PSBP_SOLLC (Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum lycopersicum GN=PSBP PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.206e-26
Identity = 59/79 (74.68%), Postives = 67/79 (84.81%), Query Frame = 3
Query:   12 VATANILEASVRP----PYYFLSVLTRTADGDEGGKHQLITATVKGGKLYICKAQAGDKRWFKGARKYVKSTASSFSVA 236
            VAT N+LEAS        YY+LSVLTRTADGDEGGKHQLITATV  GKLYICKAQAGDKRWFKGA+K+V++ A+SFS+A
Sbjct:  180 VATRNLLEASSATVGGKEYYYLSVLTRTADGDEGGKHQLITATVNDGKLYICKAQAGDKRWFKGAKKFVENAATSFSIA 258          
The following BLAST results are available for this feature:
BLAST of EY679855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
PSBP1_ARATH6.831e-3082.28Oxygen-evolving enhancer protein 2-1, chloroplasti... [more]
PSBP_SINAL5.783e-2978.48Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP2_ARATH9.864e-2979.75Putative oxygen-evolving enhancer protein 2-2 OS=A... [more]
PSBP_PEA4.895e-2878.05Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP_CUCSA4.895e-2879.75Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP_BRAJU4.895e-2877.22Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP_SOLTU3.173e-2775.95Oxygen-evolving enhancer protein 2, chloroplastic ... [more]
PSBP1_TOBAC3.173e-2777.22Oxygen-evolving enhancer protein 2-1, chloroplasti... [more]
PSBP2_TOBAC7.069e-2774.68Oxygen-evolving enhancer protein 2-2, chloroplasti... [more]
PSBP_SOLLC1.206e-2674.68Oxygen-evolving enhancer protein 2, chloroplastic ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-004-G04-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679855 ID=EY679855; Name=EY679855; organism=Citrus sinensis; type=EST; length=453bp
CCACGCGTCCGGTGGCAACAGCTAACATCTTGGAGGCTTCAGTCCGACCA
CCATACTACTTCTTGTCTGTATTAACAAGAACTGCTGATGGAGATGAAGG
TGGCAAGCATCAACTAATTACAGCCACGGTTAAAGGTGGCAAGCTTTACA
TCTGCAAGGCACAAGCTGGAGACAAGAGGTGGTTTAAGGGAGCAAGAAAG
TATGTGAAAAGCACTGCCAGTTCTTTCAGTGTTGCTTGAGACATTAATCA
GAATTTTTATGTAAATCCAACTTAATGTATGCTGTTTGTTTTGAATTATC
TACTCCCATCTTTCCCCAAAAGCTTCTGAGTTTCTAATTGAAGGAGTTGG
TTGGAAAAAGCTTGTGGATATTTGAGTATTTAATGGCATATAAGGGCCCT
CTTGTATAGCTGTTACAAATGTTTCCCGTCAAAAAAAAAAAAAAAAAAAA
AAA
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