FC871381

Overview
NameFC871381
Unique NameFC871381
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length589
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1217 contig Csv1_Contig1217:581..1170. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC871381 vs. ExPASy Swiss-Prot
Match: APX1_PEA (L-ascorbate peroxidase, cytosolic OS=Pisum sativum GN=APX1 PE=1 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 2.611e-22
Identity = 52/56 (92.86%), Postives = 52/56 (92.86%), Query Frame = 2
Query:    2 LTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELGFAEA 169
            LTGEKDGLLQLPSDKALL D VFRPLVEKYAADED FF DYAEAHLKLSELGFAEA
Sbjct:  195 LTGEKDGLLQLPSDKALLTDSVFRPLVEKYAADEDVFFADYAEAHLKLSELGFAEA 250          
BLAST of FC871381 vs. ExPASy Swiss-Prot
Match: APX1_ARATH (L-ascorbate peroxidase 1, cytosolic OS=Arabidopsis thaliana GN=APX1 PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 5.816e-22
Identity = 50/56 (89.29%), Postives = 54/56 (96.43%), Query Frame = 2
Query:    2 LTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELGFAEA 169
            L+GEK+GLLQL SDKALLDDPVFRPLVEKYAADEDAFF DYAEAH+KLSELGFA+A
Sbjct:  195 LSGEKEGLLQLVSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHMKLSELGFADA 250          
BLAST of FC871381 vs. ExPASy Swiss-Prot
Match: APX2_ORYSJ (L-ascorbate peroxidase 2, cytosolic OS=Oryza sativa subsp. japonica GN=APX2 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.770e-21
Identity = 48/55 (87.27%), Postives = 52/55 (94.55%), Query Frame = 2
Query:    2 LTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELGFAE 166
            ++GEK+GLLQLPSDKAL+ DP FRPLVEKYAADEDAFF DYAEAHLKLSELGFAE
Sbjct:  196 VSGEKEGLLQLPSDKALMADPAFRPLVEKYAADEDAFFADYAEAHLKLSELGFAE 250          
BLAST of FC871381 vs. ExPASy Swiss-Prot
Match: APX2_ARATH (L-ascorbate peroxidase 2, cytosolic OS=Arabidopsis thaliana GN=APX2 PE=2 SV=3)

HSP 1 Score: 98.2117 bits (243), Expect = 3.192e-20
Identity = 46/55 (83.64%), Postives = 51/55 (92.73%), Query Frame = 2
Query:    2 LTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELGFAE 166
            L+GEK+GLLQLP+DKALLDDP+F P VEKYAADEDAFF DY EAHLKLSELGFA+
Sbjct:  195 LSGEKEGLLQLPTDKALLDDPLFLPFVEKYAADEDAFFEDYTEAHLKLSELGFAD 249          
BLAST of FC871381 vs. ExPASy Swiss-Prot
Match: APX1_ORYSJ (L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. japonica GN=APX1 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.192e-20
Identity = 47/56 (83.93%), Postives = 51/56 (91.07%), Query Frame = 2
Query:    2 LTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELGFAEA 169
            L+G+K+GLLQLPSDKALL DP FRPLVEKYAADE AFF DY EAHLKLSELGFA+A
Sbjct:  195 LSGDKEGLLQLPSDKALLSDPAFRPLVEKYAADEKAFFEDYKEAHLKLSELGFADA 250          
BLAST of FC871381 vs. ExPASy Swiss-Prot
Match: APX1_ORYSI (L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. indica GN=APX1 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.702e-19
Identity = 46/56 (82.14%), Postives = 50/56 (89.29%), Query Frame = 2
Query:    2 LTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELGFAEA 169
            L+G+K+GLLQLPSDKALL DP F PLVEKYAADE AFF DY EAHLKLSELGFA+A
Sbjct:  195 LSGDKEGLLQLPSDKALLSDPAFCPLVEKYAADEKAFFEDYKEAHLKLSELGFADA 250          
BLAST of FC871381 vs. ExPASy Swiss-Prot
Match: APX3_ARATH (L-ascorbate peroxidase 3, peroxisomal OS=Arabidopsis thaliana GN=APX3 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.091e-15
Identity = 39/53 (73.58%), Postives = 44/53 (83.02%), Query Frame = 2
Query:    2 LTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELGF 160
            L GE +GLL+LP+DK LL+DP FR LVE YA DEDAFF DYAE+H KLSELGF
Sbjct:  192 LKGESEGLLKLPTDKTLLEDPEFRRLVELYAKDEDAFFRDYAESHKKLSELGF 244          
BLAST of FC871381 vs. ExPASy Swiss-Prot
Match: APX4_ORYSJ (Probable L-ascorbate peroxidase 4 OS=Oryza sativa subsp. japonica GN=APX4 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.617e-14
Identity = 37/53 (69.81%), Postives = 43/53 (81.13%), Query Frame = 2
Query:    2 LTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELGF 160
            L GE +GLL+LP+DKALL+DP FR  V+ YA DED FF DYAE+H KLSELGF
Sbjct:  192 LKGESEGLLKLPTDKALLEDPSFRRYVDLYARDEDTFFKDYAESHKKLSELGF 244          
BLAST of FC871381 vs. ExPASy Swiss-Prot
Match: APX3_ORYSJ (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. japonica GN=APX3 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.696e-13
Identity = 36/53 (67.92%), Postives = 42/53 (79.25%), Query Frame = 2
Query:    2 LTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELGF 160
            L    +GLL+LP+DKAL++DP FR  VE YA DEDAFF DYAE+H KLSELGF
Sbjct:  193 LKENSEGLLKLPTDKALVEDPTFRRYVELYAKDEDAFFRDYAESHKKLSELGF 245          
BLAST of FC871381 vs. ExPASy Swiss-Prot
Match: APX3_ORYSI (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. indica GN=APX3 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.696e-13
Identity = 36/53 (67.92%), Postives = 42/53 (79.25%), Query Frame = 2
Query:    2 LTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELGF 160
            L    +GLL+LP+DKAL++DP FR  VE YA DEDAFF DYAE+H KLSELGF
Sbjct:  193 LKENSEGLLKLPTDKALVEDPTFRRYVELYAKDEDAFFRDYAESHKKLSELGF 245          
The following BLAST results are available for this feature:
BLAST of FC871381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
APX1_PEA2.611e-2292.86L-ascorbate peroxidase, cytosolic OS=Pisum sativum... [more]
APX1_ARATH5.816e-2289.29L-ascorbate peroxidase 1, cytosolic OS=Arabidopsis... [more]
APX2_ORYSJ3.770e-2187.27L-ascorbate peroxidase 2, cytosolic OS=Oryza sativ... [more]
APX2_ARATH3.192e-2083.64L-ascorbate peroxidase 2, cytosolic OS=Arabidopsis... [more]
APX1_ORYSJ3.192e-2083.93L-ascorbate peroxidase 1, cytosolic OS=Oryza sativ... [more]
APX1_ORYSI2.702e-1982.14L-ascorbate peroxidase 1, cytosolic OS=Oryza sativ... [more]
APX3_ARATH3.091e-1573.58L-ascorbate peroxidase 3, peroxisomal OS=Arabidops... [more]
APX4_ORYSJ2.617e-1469.81Probable L-ascorbate peroxidase 4 OS=Oryza sativa ... [more]
APX3_ORYSJ1.696e-1367.92Probable L-ascorbate peroxidase 3 OS=Oryza sativa ... [more]
APX3_ORYSI1.696e-1367.92Probable L-ascorbate peroxidase 3 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2CE05FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK2CE05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871381 ID=FC871381; Name=FC871381; organism=Citrus sinensis; type=EST; length=589bp
CTTGACTGGTGAGAAGGATGGTCTTCTGCAATTGCCATCTGACAAGGCCC
TTCTGGATGACCCTGTTTTCCGCCCTCTTGTTGAGAAATATGCTGCGGAT
GAGGACGCTTTCTTCACTGATTATGCTGAGGCTCATCTCAAGCTCTCTGA
GCTAGGATTTGCCGAAGCCTAAAGTTACCTGAGTAAATAAATGGTTGGAA
TGATGCCAACAACAGTGTGCCTCTATTTTATGTTTTTTGAATTCTCAGAA
AATTCGAATTTCAAGATGTTGTTGGTTGAATTTTGTGGTTTTGTTTTGTT
GCACATGGTGGATTGTGAAAAGTTGGGTCGAATACTATGGTTACTATCAT
CCTTTAGAACTAATAATATCAACTTTTTTCAAAAAAAAAGAAAAAAAAAA
AAAAAAAAAAAAAAGAAAAGAAAATAGAAAAAAAAAAAAAAAAAAAAAAA
ACAAAAAAAAAAAATCTGGAATAAAAAAAGAAATCATACAAAAACCAACT
GTAAAAAAAACGGTTGGAGGAAGATGGCAGATAAAAAAATACCAGTTGAC
GACCGTTTTATTCTATTTGATGTGGTAAAAAAAGGTGAT
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