EY715966
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY715966 vs. ExPASy Swiss-Prot
Match: UBC1_ARATH (Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1 PE=1 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 2.317e-48 Identity = 81/89 (91.01%), Postives = 86/89 (96.63%), Query Frame = 1 Query: 55 MSTPAKKRLMRDFKRLRRDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTGRFVIRMFHPYIYADGSICL 321 MSTPA+KRLMRDFKRL++DPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+EDYPNKPPT RFV RMFHP IYADGSICL Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICL 89 HSP 2 Score: 35.8094 bits (81), Expect = 2.317e-48 Identity = 15/17 (88.24%), Postives = 16/17 (94.12%), Query Frame = 2 Query: 323 DILQNQWSPIFDVVAIL 373 DILQNQWSPI+DV AIL Sbjct: 90 DILQNQWSPIYDVAAIL 106 HSP 3 Score: 21.557 bits (44), Expect = 2.317e-48 Identity = 10/19 (52.63%), Postives = 13/19 (68.42%), Query Frame = 3 Query: 375 TCIRSLVWDPGEIFPAHSE 431 T I+SL+ DP PA+SE Sbjct: 107 TSIQSLLCDPNPNSPANSE 125
BLAST of EY715966 vs. ExPASy Swiss-Prot
Match: UBC2_MEDSA (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 3.014e-48 Identity = 81/89 (91.01%), Postives = 85/89 (95.51%), Query Frame = 1 Query: 55 MSTPAKKRLMRDFKRLRRDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTGRFVIRMFHPYIYADGSICL 321 MSTPA+KRLMRDFKRL+ DPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+EDYPNKPPT RFV RMFHP IYADGSICL Sbjct: 1 MSTPARKRLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICL 89 HSP 2 Score: 35.8094 bits (81), Expect = 3.014e-48 Identity = 15/17 (88.24%), Postives = 16/17 (94.12%), Query Frame = 2 Query: 323 DILQNQWSPIFDVVAIL 373 DILQNQWSPI+DV AIL Sbjct: 90 DILQNQWSPIYDVAAIL 106 HSP 3 Score: 21.557 bits (44), Expect = 3.014e-48 Identity = 10/19 (52.63%), Postives = 13/19 (68.42%), Query Frame = 3 Query: 375 TCIRSLVWDPGEIFPAHSE 431 T I+SL+ DP PA+SE Sbjct: 107 TSIQSLLCDPNPNSPANSE 125
BLAST of EY715966 vs. ExPASy Swiss-Prot
Match: UBC3_ARATH (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3 PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 8.602e-45 Identity = 76/89 (85.39%), Postives = 81/89 (91.01%), Query Frame = 1 Query: 55 MSTPAKKRLMRDFKRLRRDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTGRFVIRMFHPYIYADGSICL 321 M+TPAKKRLM DFKRL++DPP GISGAPQDNNIM WNA+IFGP+DTPWDGGTFKLTL FTEDYPNKPP RFV RMFHP IYADGSICL Sbjct: 1 MTTPAKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICL 89 HSP 2 Score: 35.4242 bits (80), Expect = 8.602e-45 Identity = 14/17 (82.35%), Postives = 16/17 (94.12%), Query Frame = 2 Query: 323 DILQNQWSPIFDVVAIL 373 DILQNQWSPI+DV A+L Sbjct: 90 DILQNQWSPIYDVAAVL 106
BLAST of EY715966 vs. ExPASy Swiss-Prot
Match: UBC2_ARATH (Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2 PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 4.242e-44 Identity = 89/148 (60.14%), Postives = 104/148 (70.27%), Query Frame = 1 Query: 55 MSTPAKKRLMRDFKRLRRDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTGRFVIRMFHPYIYADGSICLGYIAKSVESYI*CCSYTGPVFGRWCGIRVRFFLLTPKTTRVLLDAKRNNRPKSREILEQ 498 MSTPA+KRLMRDFKRL++DPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+EDYPNKPPT RFV RMFHP IYADGSICL + + + C + R+ ++KR + RE++EQ Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPN-SPANSEAARMFSESKREYNRRVREVVEQ 147
BLAST of EY715966 vs. ExPASy Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.234e-43 Identity = 90/148 (60.81%), Postives = 101/148 (68.24%), Query Frame = 1 Query: 55 MSTPAKKRLMRDFKRLRRDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTGRFVIRMFHPYIYADGSICLGYIAKSVESYI*CCSYTGPVFGRWCGIRVRFFLLTPKTTRVLLDAKRNNRPKSREILEQ 498 MSTPA+KRLMRDFKRL++DPPAGISGAP DNNI LWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPT RFV RMFHP IYADGSICL + + + C + R+ + KR K RE++EQ Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPN-SPANSEAARMYSENKREYNRKVREVVEQ 147
BLAST of EY715966 vs. ExPASy Swiss-Prot
Match: UBE2A_MOUSE (Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 2.624e-40 Identity = 68/89 (76.40%), Postives = 82/89 (92.13%), Query Frame = 1 Query: 55 MSTPAKKRLMRDFKRLRRDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTGRFVIRMFHPYIYADGSICL 321 MSTPA++RLMRDFKRL+ DPPAG+SGAP +NNIM+WNAVIFGP+ TP++ GTFKLT++FTE+YPNKPPT RFV +MFHP +YADGSICL Sbjct: 1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICL 89 HSP 2 Score: 30.4166 bits (67), Expect = 2.624e-40 Identity = 12/17 (70.59%), Postives = 15/17 (88.24%), Query Frame = 2 Query: 323 DILQNQWSPIFDVVAIL 373 DILQN+WSP +DV +IL Sbjct: 90 DILQNRWSPTYDVSSIL 106
BLAST of EY715966 vs. ExPASy Swiss-Prot
Match: UBE2A_HUMAN (Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=2 SV=2) HSP 1 Score: 157.147 bits (396), Expect = 2.624e-40 Identity = 68/89 (76.40%), Postives = 82/89 (92.13%), Query Frame = 1 Query: 55 MSTPAKKRLMRDFKRLRRDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTGRFVIRMFHPYIYADGSICL 321 MSTPA++RLMRDFKRL+ DPPAG+SGAP +NNIM+WNAVIFGP+ TP++ GTFKLT++FTE+YPNKPPT RFV +MFHP +YADGSICL Sbjct: 1 MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICL 89 HSP 2 Score: 30.4166 bits (67), Expect = 2.624e-40 Identity = 12/17 (70.59%), Postives = 15/17 (88.24%), Query Frame = 2 Query: 323 DILQNQWSPIFDVVAIL 373 DILQN+WSP +DV +IL Sbjct: 90 DILQNRWSPTYDVSSIL 106
BLAST of EY715966 vs. ExPASy Swiss-Prot
Match: UBCD6_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=UbcD6 PE=2 SV=2) HSP 1 Score: 155.606 bits (392), Expect = 3.418e-40 Identity = 67/89 (75.28%), Postives = 80/89 (89.89%), Query Frame = 1 Query: 55 MSTPAKKRLMRDFKRLRRDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTGRFVIRMFHPYIYADGSICL 321 MSTPA++RLMRDFKRL+ DPP G+SGAP DNNIM+WNAVIFGP DTP++ GTFKLT++FTE+YPNKPPT RFV ++FHP +YADG ICL Sbjct: 1 MSTPARRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKVFHPNVYADGGICL 89 HSP 2 Score: 31.5722 bits (70), Expect = 3.418e-40 Identity = 13/17 (76.47%), Postives = 15/17 (88.24%), Query Frame = 2 Query: 323 DILQNQWSPIFDVVAIL 373 DILQN+WSP +DV AIL Sbjct: 90 DILQNRWSPTYDVSAIL 106
BLAST of EY715966 vs. ExPASy Swiss-Prot
Match: UBE2B_RAT (Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 4.002e-38 Identity = 64/89 (71.91%), Postives = 79/89 (88.76%), Query Frame = 1 Query: 55 MSTPAKKRLMRDFKRLRRDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTGRFVIRMFHPYIYADGSICL 321 MSTPA++RLMRDFKRL+ DPP G+SGAP +NNIM WNAVIFGP+ TP++ GTFKL ++F+E+YPNKPPT RF+ +MFHP +YADGSICL Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICL 89 HSP 2 Score: 30.4166 bits (67), Expect = 4.002e-38 Identity = 12/17 (70.59%), Postives = 15/17 (88.24%), Query Frame = 2 Query: 323 DILQNQWSPIFDVVAIL 373 DILQN+WSP +DV +IL Sbjct: 90 DILQNRWSPTYDVSSIL 106
BLAST of EY715966 vs. ExPASy Swiss-Prot
Match: UBE2B_RABIT (Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 4.002e-38 Identity = 64/89 (71.91%), Postives = 79/89 (88.76%), Query Frame = 1 Query: 55 MSTPAKKRLMRDFKRLRRDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTGRFVIRMFHPYIYADGSICL 321 MSTPA++RLMRDFKRL+ DPP G+SGAP +NNIM WNAVIFGP+ TP++ GTFKL ++F+E+YPNKPPT RF+ +MFHP +YADGSICL Sbjct: 1 MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICL 89 HSP 2 Score: 30.4166 bits (67), Expect = 4.002e-38 Identity = 12/17 (70.59%), Postives = 15/17 (88.24%), Query Frame = 2 Query: 323 DILQNQWSPIFDVVAIL 373 DILQN+WSP +DV +IL Sbjct: 90 DILQNRWSPTYDVSSIL 106 The following BLAST results are available for this feature:
BLAST of EY715966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 147
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY715966 ID=EY715966; Name=EY715966; organism=Citrus sinensis; type=EST; length=948bpback to top |