EY679001
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679001 vs. ExPASy Swiss-Prot
Match: SN114_SCHPO (114 kDa U5 small nuclear ribonucleoprotein component homolog OS=Schizosaccharomyces pombe GN=cwf10 PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.307e-54 Identity = 77/128 (60.16%), Postives = 103/128 (80.47%), Query Frame = 2 Query: 2 VDASIMKSATLCNLEYDEDVYIFRPLQFNTLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNQE 385 VD SI K+AT+ + +D YIFRP+ + V K A EP NPSELPK+++GLRK +KSYPL+ITKVEESGEHTI GTGE+Y+D ++ DLR LYSE+E++V+DPV FCET V++SS+KCF++TPN++ Sbjct: 568 VDNSISKTATIVSDNLKDDPYIFRPIAHMSESVFKVAVEPHNPSELPKLLDGLRKTNKSYPLSITKVEESGEHTIFGTGEMYMDCLLYDLRTLYSEIEIRVSDPVARFCETAVDTSSIKCFSDTPNKK 695 HSP 2 Score: 68.9366 bits (167), Expect = 1.307e-54 Identity = 34/72 (47.22%), Postives = 47/72 (65.28%), Query Frame = 3 Query: 375 PTKKNKITMIAEPLERGLAEDIENGVVSIELGV*RRLVISLKQKYDWGFYFEHDSIWAFGPEKQGPNFLLDE 590 P KKN+ITM+ EPLE+G++ DIENG V+I +R+ ++ YDW SIWAFGP+ +G N L D+ Sbjct: 692 PNKKNRITMVVEPLEKGISNDIENGKVNINWPQ-KRISEFFQKNYDWDLLASR-SIWAFGPDDRGTNILRDD 761
BLAST of EY679001 vs. ExPASy Swiss-Prot
Match: U5S1_MOUSE (116 kDa U5 small nuclear ribonucleoprotein component OS=Mus musculus GN=Eftud2 PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 5.904e-48 Identity = 111/218 (50.92%), Postives = 146/218 (66.97%), Query Frame = 2 Query: 2 VDASIMKSATLCNLEYDEDVYIFRPLQFNTLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNQEK*NNHDCRTIGERTCRGY---*ERRCKY*IGSLKTLGDFFKTKI*LGILL*ARFYMGIWT*KAGTKFFIR*TLSPTKIEKKLCLMAVKDS 646 VD I+K+AT+ +E+ IFRPL+FNT V+K A EP+NPSELPKM++GLRK++KSYP TKVEESGEH ILGTGELYLD +M DLR++YSE+++KVADPVV+FCETVVE+SS+KCFAETPN++ + I E +G E + K LG+FF+TK +L AR G + TL P++++K L L +VKDS Sbjct: 554 VDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNKK----NKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDWDLLA-ARSIWAFGPDATGPNILVDDTL-PSEVDKAL-LGSVKDS 764
BLAST of EY679001 vs. ExPASy Swiss-Prot
Match: U5S1_HUMAN (116 kDa U5 small nuclear ribonucleoprotein component OS=Homo sapiens GN=EFTUD2 PE=1 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 5.904e-48 Identity = 111/218 (50.92%), Postives = 146/218 (66.97%), Query Frame = 2 Query: 2 VDASIMKSATLCNLEYDEDVYIFRPLQFNTLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNQEK*NNHDCRTIGERTCRGY---*ERRCKY*IGSLKTLGDFFKTKI*LGILL*ARFYMGIWT*KAGTKFFIR*TLSPTKIEKKLCLMAVKDS 646 VD I+K+AT+ +E+ IFRPL+FNT V+K A EP+NPSELPKM++GLRK++KSYP TKVEESGEH ILGTGELYLD +M DLR++YSE+++KVADPVV+FCETVVE+SS+KCFAETPN++ + I E +G E + K LG+FF+TK +L AR G + TL P++++K L L +VKDS Sbjct: 555 VDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNKK----NKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDWDLLA-ARSIWAFGPDATGPNILVDDTL-PSEVDKAL-LGSVKDS 765
BLAST of EY679001 vs. ExPASy Swiss-Prot
Match: U5S1_BOVIN (116 kDa U5 small nuclear ribonucleoprotein component OS=Bos taurus GN=EFTUD2 PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 5.904e-48 Identity = 111/218 (50.92%), Postives = 146/218 (66.97%), Query Frame = 2 Query: 2 VDASIMKSATLCNLEYDEDVYIFRPLQFNTLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNQEK*NNHDCRTIGERTCRGY---*ERRCKY*IGSLKTLGDFFKTKI*LGILL*ARFYMGIWT*KAGTKFFIR*TLSPTKIEKKLCLMAVKDS 646 VD I+K+AT+ +E+ IFRPL+FNT V+K A EP+NPSELPKM++GLRK++KSYP TKVEESGEH ILGTGELYLD +M DLR++YSE+++KVADPVV+FCETVVE+SS+KCFAETPN++ + I E +G E + K LG+FF+TK +L AR G + TL P++++K L L +VKDS Sbjct: 555 VDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNKK----NKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDWDLLA-ARSIWAFGPDATGPNILVDDTL-PSEVDKAL-LGSVKDS 765
BLAST of EY679001 vs. ExPASy Swiss-Prot
Match: U5S1_CHICK (116 kDa U5 small nuclear ribonucleoprotein component OS=Gallus gallus GN=EFTUD2 PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 7.711e-48 Identity = 111/218 (50.92%), Postives = 146/218 (66.97%), Query Frame = 2 Query: 2 VDASIMKSATLCNLEYDEDVYIFRPLQFNTLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNQEK*NNHDCRTIGERTCRGY---*ERRCKY*IGSLKTLGDFFKTKI*LGILL*ARFYMGIWT*KAGTKFFIR*TLSPTKIEKKLCLMAVKDS 646 VD I+K+AT+ +E+ IFRPL+FNT V+K A EP+NPSELPKM++GLRK++KSYP TKVEESGEH ILGTGELYLD +M DLR++YSE+++KVADPVV+FCETVVE+SS+KCFAETPN++ + I E +G E + K LG+FF+TK +L AR G + TL P++++K L L +VKDS Sbjct: 555 VDQPIVKTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNKK----NKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDWDLLA-ARSIWAFGPDATGPNILVDDTL-PSEVDKAL-LGSVKDS 765
BLAST of EY679001 vs. ExPASy Swiss-Prot
Match: U5S1_PONAB (116 kDa U5 small nuclear ribonucleoprotein component OS=Pongo abelii GN=EFTUD2 PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.827e-47 Identity = 110/218 (50.46%), Postives = 145/218 (66.51%), Query Frame = 2 Query: 2 VDASIMKSATLCNLEYDEDVYIFRPLQFNTLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNQEK*NNHDCRTIGERTCRGY---*ERRCKY*IGSLKTLGDFFKTKI*LGILL*ARFYMGIWT*KAGTKFFIR*TLSPTKIEKKLCLMAVKDS 646 VD I+K+AT+ +E+ IFRPL+FNT V+K A EP+NPSELPKM++GLRK++KSYP TKVEESGEH ILGTGELYLD +M DL ++YSE+++KVADPVV+FCETVVE+SS+KCFAETPN++ + I E +G E + K LG+FF+TK +L AR G + TL P++++K L L +VKDS Sbjct: 555 VDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLPKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNKK----NKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDWDLLA-ARSIWAFGPDATGPNILVDDTL-PSEVDKAL-LGSVKDS 765
BLAST of EY679001 vs. ExPASy Swiss-Prot
Match: EF2_CHICK (Elongation factor 2 OS=Gallus gallus GN=EEF2 PE=1 SV=3) HSP 1 Score: 112.464 bits (280), Expect = 1.021e-34 Identity = 54/127 (42.52%), Postives = 89/127 (70.08%), Query Frame = 2 Query: 2 VDASIMKSATLCNLEYDEDVYIFRPLQFNTLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNQ 382 VD ++K+ T+ E+ ++ R ++F+ PVV+ A E NP++LPK+VEGL++++KS P+ +EESGEH I G GEL+L+ +KDL E ++ + +K +DPVVS+ ETV E S++ C +++PN+ Sbjct: 475 VDQFLVKTGTITTFEHAHNM---RVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESNVMCLSKSPNK 598 HSP 2 Score: 56.225 bits (134), Expect = 1.021e-34 Identity = 33/75 (44.00%), Postives = 41/75 (54.67%), Query Frame = 3 Query: 363 LLKLPTKKNKITMIAEPLERGLAEDIENGVVSIELGV*RRLVISLKQKYDWGFYFEHDSIWAFGPEKQGPNFLLD 587 L K P K N++ M A P GLAEDI+ G VS + +R L +KY+W E IW FGP+ GPN L D Sbjct: 592 LSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQR-ARYLAEKYEWD-VTEARKIWCFGPDGTGPNILTD 664
BLAST of EY679001 vs. ExPASy Swiss-Prot
Match: EF2_DROME (Elongation factor 2 OS=Drosophila melanogaster GN=Ef2b PE=1 SV=4) HSP 1 Score: 112.464 bits (280), Expect = 1.022e-34 Identity = 54/127 (42.52%), Postives = 87/127 (68.50%), Query Frame = 2 Query: 2 VDASIMKSATLCNLEYDEDVYIFRPLQFNTLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNQ 382 VD ++K+ T+ + D + + ++F+ PVV+ A EP NP++LPK+VEGL++++KS P+ +EESGEH I G GEL+L+ +KDL E ++ + +K +DPVVS+ ETV E S C +++PN+ Sbjct: 461 VDQFLVKTGTITTFK---DAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDHACIPLKKSDPVVSYRETVSEESDQMCLSKSPNK 584 HSP 2 Score: 56.225 bits (134), Expect = 1.022e-34 Identity = 34/75 (45.33%), Postives = 43/75 (57.33%), Query Frame = 3 Query: 363 LLKLPTKKNKITMIAEPLERGLAEDIENGVVSIELGV*RRLVISLKQKYDWGFYFEHDSIWAFGPEKQGPNFLLD 587 L K P K N++ M A P+ GL EDI+NG VS + R L +KYD+ E IW FGP+ GPNF+LD Sbjct: 578 LSKSPNKHNRLLMKALPMPDGLPEDIDNGDVSAKDEFKAR-ARYLSEKYDYD-VTEARKIWCFGPDGTGPNFILD 650
BLAST of EY679001 vs. ExPASy Swiss-Prot
Match: EF2_PONAB (Elongation factor 2 OS=Pongo abelii GN=EEF2 PE=2 SV=3) HSP 1 Score: 112.079 bits (279), Expect = 1.330e-34 Identity = 54/127 (42.52%), Postives = 89/127 (70.08%), Query Frame = 2 Query: 2 VDASIMKSATLCNLEYDEDVYIFRPLQFNTLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNQ 382 VD ++K+ T+ E+ ++ R ++F+ PVV+ A E NP++LPK+VEGL++++KS P+ +EESGEH I G GEL+L+ +KDL E ++ + +K +DPVVS+ ETV E S++ C +++PN+ Sbjct: 475 VDQFLVKTGTITTFEHAHNM---RVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESNVLCLSKSPNK 598 HSP 2 Score: 56.225 bits (134), Expect = 1.330e-34 Identity = 33/75 (44.00%), Postives = 41/75 (54.67%), Query Frame = 3 Query: 363 LLKLPTKKNKITMIAEPLERGLAEDIENGVVSIELGV*RRLVISLKQKYDWGFYFEHDSIWAFGPEKQGPNFLLD 587 L K P K N++ M A P GLAEDI+ G VS + +R L +KY+W E IW FGP+ GPN L D Sbjct: 592 LSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQR-ARYLAEKYEWD-VAEARKIWCFGPDGTGPNILTD 664
BLAST of EY679001 vs. ExPASy Swiss-Prot
Match: EF2_HUMAN (Elongation factor 2 OS=Homo sapiens GN=EEF2 PE=1 SV=4) HSP 1 Score: 112.079 bits (279), Expect = 1.330e-34 Identity = 54/127 (42.52%), Postives = 89/127 (70.08%), Query Frame = 2 Query: 2 VDASIMKSATLCNLEYDEDVYIFRPLQFNTLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNQ 382 VD ++K+ T+ E+ ++ R ++F+ PVV+ A E NP++LPK+VEGL++++KS P+ +EESGEH I G GEL+L+ +KDL E ++ + +K +DPVVS+ ETV E S++ C +++PN+ Sbjct: 475 VDQFLVKTGTITTFEHAHNM---RVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESNVLCLSKSPNK 598 HSP 2 Score: 56.225 bits (134), Expect = 1.330e-34 Identity = 33/75 (44.00%), Postives = 41/75 (54.67%), Query Frame = 3 Query: 363 LLKLPTKKNKITMIAEPLERGLAEDIENGVVSIELGV*RRLVISLKQKYDWGFYFEHDSIWAFGPEKQGPNFLLD 587 L K P K N++ M A P GLAEDI+ G VS + +R L +KY+W E IW FGP+ GPN L D Sbjct: 592 LSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQR-ARYLAEKYEWD-VAEARKIWCFGPDGTGPNILTD 664 The following BLAST results are available for this feature:
BLAST of EY679001 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >EY679001 ID=EY679001; Name=EY679001; organism=Citrus sinensis; type=EST; length=905bpback to top |