FC871315

Overview
NameFC871315
Unique NameFC871315
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length474
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig760 contig Csv1_Contig760:1149..1622. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC871315 vs. ExPASy Swiss-Prot
Match: DNJH_CUCSA (DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.648e-19
Identity = 44/50 (88.00%), Postives = 48/50 (96.00%), Query Frame = 1
Query:    1 FPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 150
            FP+SL+P+QCK LE VLPPRTSVQL+DMELDECEETTLHDVNIEEEMRRK
Sbjct:  340 FPDSLNPEQCKALEGVLPPRTSVQLSDMELDECEETTLHDVNIEEEMRRK 389          
BLAST of FC871315 vs. ExPASy Swiss-Prot
Match: DNJH2_ALLPO (DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.631e-17
Identity = 39/50 (78.00%), Postives = 46/50 (92.00%), Query Frame = 1
Query:    1 FPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 150
            FP+SL+PDQCK LE+VLP R + +LTDME+DECEETT+HDVNIEEEMRRK
Sbjct:  342 FPDSLTPDQCKALESVLPSRNASRLTDMEIDECEETTMHDVNIEEEMRRK 391          
BLAST of FC871315 vs. ExPASy Swiss-Prot
Match: DNJH1_ALLPO (DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.631e-17
Identity = 39/50 (78.00%), Postives = 46/50 (92.00%), Query Frame = 1
Query:    1 FPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 150
            FP+SL+PDQCK++E+VLP   S QLTDME+DECEETT+HDVNIEEEMRRK
Sbjct:  321 FPDSLTPDQCKVIESVLPRSASSQLTDMEIDECEETTMHDVNIEEEMRRK 370          
BLAST of FC871315 vs. ExPASy Swiss-Prot
Match: DNAJ3_ARATH (Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 8.464e-16
Identity = 38/50 (76.00%), Postives = 44/50 (88.00%), Query Frame = 1
Query:    1 FPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 150
            FP+SLSPDQ K LE VLP  ++ QL+DME+DECEETTLHDVNIE+EMRRK
Sbjct:  342 FPDSLSPDQTKALEAVLPKPSTAQLSDMEIDECEETTLHDVNIEDEMRRK 391          
BLAST of FC871315 vs. ExPASy Swiss-Prot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.886e-15
Identity = 37/50 (74.00%), Postives = 44/50 (88.00%), Query Frame = 1
Query:    1 FPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 150
            FP+SL+PDQ K LE +LPP+ S+ LT MELDECEETTLH+VNIEEEM+RK
Sbjct:  342 FPDSLNPDQVKSLEAILPPKPSMSLTYMELDECEETTLHNVNIEEEMKRK 391          
BLAST of FC871315 vs. ExPASy Swiss-Prot
Match: DNAJ2_ARATH (Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 1.222e-14
Identity = 35/50 (70.00%), Postives = 42/50 (84.00%), Query Frame = 1
Query:    1 FPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 150
            FPESLSPDQ K +E VLP  T   ++DME+D+CEETTLHDVNIE+EM+RK
Sbjct:  343 FPESLSPDQTKAIEAVLPKPTKAAISDMEIDDCEETTLHDVNIEDEMKRK 392          
The following BLAST results are available for this feature:
BLAST of FC871315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
DNJH_CUCSA1.648e-1988.00DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 P... [more]
DNJH2_ALLPO2.631e-1778.00DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE... [more]
DNJH1_ALLPO2.631e-1778.00DnaJ protein homolog 1 (Fragment) OS=Allium porrum... [more]
DNAJ3_ARATH8.464e-1676.00Chaperone protein dnaJ 3 OS=Arabidopsis thaliana G... [more]
DNJH_ATRNU1.886e-1574.00DnaJ protein homolog ANJ1 OS=Atriplex nummularia P... [more]
DNAJ2_ARATH1.222e-1470.00Chaperone protein dnaJ 2 OS=Arabidopsis thaliana G... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAK2BF02FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK2BF02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871315 ID=FC871315; Name=FC871315; organism=Citrus sinensis; type=EST; length=474bp
TTCCCTGAGTCACTGAGCCCAGACCAGTGCAAGATGCTGGAGACCGTACT
ACCTCCAAGGACCTCAGTCCAGCTCACCGATATGGAACTGGATGAGTGTG
AAGAAACAACCCTGCATGATGTGAACATTGAGGAGGAAATGCGAAGGAAG
CAACAAGCAGCTCAGGAGGCATACGATGAAGATGACGATATGCAAGGTGG
TGCCCAGAGAGTGCAGTGTGCTCAGCAGTGATGATGTAGAAGAAAAGGGG
TGGCCTGATTTAGTATTTTCATTGTTTGGGAGAAAAAGATTCTCAACATA
TTTATTTTCTGTTATAGGCTTTAGAGGTTCTAGTTTTGGTTTGTCTGTCT
TTATTCTTATGTTTTTCTGATAACTGACTATGTAATGGAATTCTAGCGTT
TGCACCTTCAGACTCAATGCTCATAATTAATATTTTTAGTGTTTACAATA
AAAAAAAAAAAAAAAAAAAAAAAA
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