EY680431

Overview
NameEY680431
Unique NameEY680431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length837
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680431 vs. ExPASy Swiss-Prot
Match: PGLR4_ARATH (Polygalacturonase At1g48100 OS=Arabidopsis thaliana GN=At1g48100 PE=2 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 4.392e-71
Identity = 127/264 (48.11%), Postives = 181/264 (68.56%), Query Frame = 2
Query:   41 SGKMPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFYCDKSTCKNQTSAVALSRITYERVKGTYTVK--PVHFACSDSLPCVDVTLSVIKLKPVKKRHPMYESPWRGGIWGIHPPQLPPPMAGLQTGKP 826
            S   P   PT +RF+ S N+ V G+ IQNSPQ H+KFD C GV+++++ +SSP  SPNTDGIHL N++ V I+ S ++ GDDC+SI TGCS+V +  V CGP HGISIGSLG  N++ACVSNITVR+ ++ ++ NG+R+KTWQGG+GSV  +LF NIQ+  V   I++DQ+YC    C+N+TSAV +  + Y  +KGTY V+  P+HFACSD++ C ++T+S ++L P  +   + + P+    +G       PP+  L  G P
Sbjct:  202 SSSGPCASPTMIRFFMSNNIEVKGLRIQNSPQFHMKFDGCQGVLINEIQISSPKLSPNTDGIHLGNTRSVGIYNSVVSNGDDCISIGTGCSDVDIQGVTCGPSHGISIGSLGVHNSQACVSNITVRNTVIRDSDNGLRVKTWQGGTGSVSNLLFENIQMENVLNCIIVDQYYCQSKDCRNETSAVKVFDVEYRNIKGTYDVRSPPIHFACSDTVACTNITMSEVELLP--EEGELVDDPFCWNAYGKQETLTIPPIDCLLDGSP 463          
BLAST of EY680431 vs. ExPASy Swiss-Prot
Match: ADPG2_ARATH (Polygalacturonase ADPG2 OS=Arabidopsis thaliana GN=ADPG2 PE=2 SV=2)

HSP 1 Score: 214.927 bits (546), Expect = 4.412e-55
Identity = 99/218 (45.41%), Postives = 144/218 (66.06%), Query Frame = 2
Query:   65 PTALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFYCDKSTCKNQTSAVALSRITYERVKGT-YTVKPVHFACSDSLPCVDVTLSVIKLK 715
            PTAL FY S ++ V  + ++N+ Q  +  + C  V V +V V++P DSPNTDGIH+ N++++ +  S +  GDDC+SI++G  NV ++++ CGPGHGISIGSLG DN+KA VS +TV    +  T NGVRIKT+QGGSG+   ++F NIQ+  V+ PI+IDQ YCDKS C  + SAV +  + Y  + GT  +   + F CS + PC  + L  + +K
Sbjct:  192 PTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQVSNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESGSQNVQINDITCGPGHGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNIIFQNIQMDNVKNPIIIDQDYCDKSKCTTEKSAVQVKNVVYRDISGTSASENAITFNCSKNYPCQGIVLDRVNIK 409          
BLAST of EY680431 vs. ExPASy Swiss-Prot
Match: PGLR2_CRYJA (Polygalacturonase OS=Cryptomeria japonica PE=1 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.762e-55
Identity = 101/220 (45.91%), Postives = 149/220 (67.73%), Query Frame = 2
Query:   62 KPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFYC-DKSTCKNQTSAVALSRITYERVKGT-YTVKPVHFACSDSLPCVDVTLSVIKLK 715
            +PTA++F  S  + + G+ + NSP+ HL F NC GV +  +S+++P DSPNTDGI +  SK+  +  + +  GDDCV+I TG SN+ + ++ CGPGHGISIGSLG++N++A VS + V      +T NG+RIKTWQGGSG    +++ N+++   + PI+I+QFYC   S C+NQ SAV +  +TY+ ++GT  T   +   CSDS+PC D+ LS I LK
Sbjct:  182 RPTAIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRDSPNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISIGSLGRENSRAEVSYVHVNGAKFIDTQNGLRIKTWQGGSGMASHIIYENVEMINSENPILINQFYCTSASACQNQRSAVQIQDVTYKNIRGTSATAAAIQLKCSDSMPCKDIKLSDISLK 401          
BLAST of EY680431 vs. ExPASy Swiss-Prot
Match: ADPG1_ARATH (Polygalacturonase ADPG1 OS=Arabidopsis thaliana GN=ADPG1 PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 3.162e-53
Identity = 96/218 (44.04%), Postives = 142/218 (65.14%), Query Frame = 2
Query:   65 PTALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFYCDKSTCKNQTSAVALSRITYERVKGT-YTVKPVHFACSDSLPCVDVTLSVIKLK 715
            PTAL  Y   N+ V  + ++N+ Q  +  + C  V V +V +++PGDSPNTDGIH+ N++++ +  S++  GDDC+SI+ G  N+ + ++ CGPGHGISIGSLG DN+KA VS I V       + NGVRIKT+QGGSG+ + + F NI++  V+ PI+IDQ YCDK  C++Q SAV +  + Y+ + GT  T   +   CS+  PC  + L  +K+K
Sbjct:  192 PTALTLYNLKNLNVKNLRVKNAQQIQISIEKCNKVEVSNVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQIFDLTCGPGHGISIGSLGDDNSKAYVSGINVDGAKFSESDNGVRIKTYQGGSGTAKNIKFQNIRMENVKNPIIIDQDYCDKDKCEDQESAVQVKNVVYKNISGTSATDVAITLNCSEKYPCQGIVLENVKIK 409          
BLAST of EY680431 vs. ExPASy Swiss-Prot
Match: PGLR_SOLLC (Polygalacturonase-2 OS=Solanum lycopersicum GN=PG2 PE=1 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.677e-52
Identity = 96/218 (44.04%), Postives = 139/218 (63.76%), Query Frame = 2
Query:   65 PTALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFYCDK-STCKNQTSAVALSRITYERVKGTYTVK-PVHFACSDSLPCVDVTLSVIKL 712
            PTAL F+   N+ V  +  +N+ Q H+KF++C  VV  ++ +++   SPNTDG+H+ N++ + I  + +  GDDC+SI +G  NV   N+ CGPGHGISIGSLG  N++A VSN+TV +  +    NGVRIKTWQGGSG    + F N+++ +V+ PI+IDQ YCD+   C  Q SAV +  + YE +KGT   K  + F CS + PC  + +  I L
Sbjct:  198 PTALTFWNCKNLKVNNLKSKNAQQIHIKFESCTNVVASNLMINASAKSPNTDGVHVSNTQYIQISDTIIGTGDDCISIVSGSQNVQATNITCGPGHGISIGSLGSGNSEAYVSNVTVNEAKIIGAENGVRIKTWQGGSGQASNIKFLNVEMQDVKYPIIIDQNYCDRVEPCIQQFSAVQVKNVVYENIKGTSATKVAIKFDCSTNFPCEGIIMENINL 415          
BLAST of EY680431 vs. ExPASy Swiss-Prot
Match: PGLR_ACTDE (Polygalacturonase OS=Actinidia deliciosa PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.677e-52
Identity = 98/219 (44.75%), Postives = 142/219 (64.84%), Query Frame = 2
Query:   65 PTALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFYCDK-STCKNQTSAVALSRITYERVKGTYTVK-PVHFACSDSLPCVDVTLSVIKLK 715
            PTAL FY S +V V  + I+N+ Q H+ FDNC+ V   ++ V++P +SPNTDGIH+  ++++ I +  +  GDDC+SI  G   V V+++ CGPGHGISIGSLG  N++A VS++ V    +  T NGVRIKTWQGGSGS   + F N+++  V+ PI+IDQ YCD+   C+ Q+SAV +  + Y+ +KGT      + F CS   PC  + L  + L+
Sbjct:  211 PTALTFYKSKHVIVKNLKIENAQQIHVSFDNCVNVQASNLMVTAPENSPNTDGIHVTGTQNIHISSCVIGTGDDCISIVNGSRKVRVNDITCGPGHGISIGSLGYGNSEAHVSDVVVNGAKLCGTTNGVRIKTWQGGSGSASNIKFQNVEMHNVENPIIIDQNYCDQDKPCQEQSSAVQVKNVVYQNIKGTCASNVAITFDCSKRFPCQGIVLEDVDLE 429          
BLAST of EY680431 vs. ExPASy Swiss-Prot
Match: PGLR2_CHAOB (Polygalacturonase OS=Chamaecyparis obtusa PE=1 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 5.963e-52
Identity = 100/220 (45.45%), Postives = 143/220 (65.00%), Query Frame = 2
Query:   62 KPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFYC-DKSTCKNQTSAVALSRITYERVKGT-YTVKPVHFACSDSLPCVDVTLSVIKLK 715
            +PTA++   S +VTV  +T+ NSP+ HL F  C GV +  + + +P DSPNTDGI +  SK   I    +  GDDC++I TG SN+ + ++ CGPGHGISIGSLG+DN++A VS++ V      +T NG+RIKTWQGGSG    + + N+++   + PI+I+QFYC   S C+NQ SAV +  +TY+ + GT  T   +   CSDS+PC  + LS + LK
Sbjct:  182 RPTAIKIDYSKSVTVKELTLMNSPEFHLVFGECEGVKIQGLKIKAPRDSPNTDGIDIFASKRFHIEKCVIGTGDDCIAIGTGSSNITIKDLICGPGHGISIGSLGRDNSRAEVSHVHVNRAKFIDTQNGLRIKTWQGGSGLASYITYENVEMINSENPILINQFYCTSASACQNQRSAVQIQGVTYKNIHGTSATAAAIQLMCSDSVPCTGIQLSNVSLK 401          
BLAST of EY680431 vs. ExPASy Swiss-Prot
Match: QRT2_ARATH (Polygalacturonase QRT2 OS=Arabidopsis thaliana GN=QRT2 PE=1 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 1.017e-51
Identity = 101/234 (43.16%), Postives = 152/234 (64.96%), Query Frame = 2
Query:   23 PIRSELSGKMPSI-KPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFYCDK-STCKNQTSAVALSRITYERVKGTYTVKP--VHFACSDSLPCVDVTLSVIKL 712
            P   +++ ++P +  PTA+ F    N+ V+ I ++N+ Q HL F +C  V   ++ V+SP DSPNTDGIH+  ++++LI  S +  GDDC+SI +G  NV    + CGPGHGISIGSLG+DN++A VSN+ V    +  T NGVRIKTWQGG G  + ++F +I +  V  PI+I+Q YCD+   C  Q SAV +S + Y+ ++GT + +P  V F CS ++PC  +++  +KL
Sbjct:  178 PKSCKINPQLPCLGAPTAVTFVECNNLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPADSPNTDGIHVSGTQNILIQDSIVRTGDDCISIVSGSENVRATGITCGPGHGISIGSLGEDNSEAYVSNVVVNKATLIGTTNGVRIKTWQGGHGMAKNIIFQDIIMKNVTNPIIINQDYCDRVEACPEQKSAVQVSNVLYKNIQGT-SSRPIAVKFVCSKNIPCRGISMQNVKL 410          
BLAST of EY680431 vs. ExPASy Swiss-Prot
Match: PGLR2_JUNAS (Polygalacturonase OS=Juniperus ashei GN=JNA2 PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.865e-51
Identity = 102/255 (40.00%), Postives = 152/255 (59.61%), Query Frame = 2
Query:   62 KPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFYC-DKSTCKNQTSAVALSRITYERVKGT-YTVKPVHFACSDSLPCVDVTLSVIKLKPV---------KKRHPMYESPWRGGIWGIHPPQLP 793
            +PTA++   S +VTV  +T+ NSP+ HL F  C GV +  + + +P DSPNTDGI +  SK   I    +  GDDCV++ TG SN+ + ++ CGPGHG+SIGSLGK N+++ VS + +      +T NG+RIKTWQGGSG    + + N+++   + PI+I+QFYC   + CKNQ SAV +  +T++ + GT  T   +   CSDS+PC ++ LS + LK           K  +  Y +P       +HP + P
Sbjct:  183 RPTAIKIDFSKSVTVKELTLTNSPEFHLVFGECDGVKIQGIKIKAPRDSPNTDGIDIFASKRFEIEKCTIGTGDDCVAVGTGSSNITIKDLTCGPGHGMSIGSLGKGNSRSEVSFVHLDGAKFIDTQNGLRIKTWQGGSGLASHITYENVEMINAENPILINQFYCTSAAACKNQRSAVKIQDVTFKNIHGTSATTAAIQLMCSDSVPCSNIKLSNVFLKLTSGKVATCVNKNANGYYTNPLNPSCKSLHPGRTP 437          
BLAST of EY680431 vs. ExPASy Swiss-Prot
Match: PGLR_MALDO (Polygalacturonase OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 5.048e-51
Identity = 96/220 (43.64%), Postives = 143/220 (65.00%), Query Frame = 2
Query:   65 PTALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDVSVSSPGDSPNTDGIHLQNSKDVLIHTSNLACGDDCVSIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTKACVSNITVRDVMMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFYCDKST--CKNQTSAVALSRITYERVKGT-YTVKPVHFACSDSLPCVDVTLSVIKLK 715
            PTA+ F    N+ V  + IQ++ Q H+ F NCI V    ++V++P DSPNTDGIH+ N++++ I +S +  GDDC+SI +G   V   ++ CGPGHGISIGSLG+D ++  VS + V    +  T NG+RIKTW+GGSGS   ++F N+Q+++V  PI+IDQ YCD  T  CK Q SAV +  + Y+ ++GT  +   +   CS S+PC  + L  ++L+
Sbjct:  220 PTAVTFNRCNNLVVKNLNIQDAQQIHVIFQNCINVQASCLTVTAPEDSPNTDGIHVTNTQNITISSSVIGTGDDCISIVSGSQRVQATDITCGPGHGISIGSLGEDGSEDHVSGVFVNGAKLSGTSNGLRIKTWKGGSGSATNIVFQNVQMNDVTNPIIIDQNYCDHKTKDCKQQKSAVQVKNVLYQNIRGTSASGDAITLNCSQSVPCQGIVLQSVQLQ 439          
The following BLAST results are available for this feature:
BLAST of EY680431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
PGLR4_ARATH4.392e-7148.11Polygalacturonase At1g48100 OS=Arabidopsis thalian... [more]
ADPG2_ARATH4.412e-5545.41Polygalacturonase ADPG2 OS=Arabidopsis thaliana GN... [more]
PGLR2_CRYJA5.762e-5545.91Polygalacturonase OS=Cryptomeria japonica PE=1 SV=... [more]
ADPG1_ARATH3.162e-5344.04Polygalacturonase ADPG1 OS=Arabidopsis thaliana GN... [more]
PGLR_SOLLC2.677e-5244.04Polygalacturonase-2 OS=Solanum lycopersicum GN=PG2... [more]
PGLR_ACTDE2.677e-5244.75Polygalacturonase OS=Actinidia deliciosa PE=2 SV=1[more]
PGLR2_CHAOB5.963e-5245.45Polygalacturonase OS=Chamaecyparis obtusa PE=1 SV=... [more]
QRT2_ARATH1.017e-5143.16Polygalacturonase QRT2 OS=Arabidopsis thaliana GN=... [more]
PGLR2_JUNAS3.865e-5140.00Polygalacturonase OS=Juniperus ashei GN=JNA2 PE=1 ... [more]
PGLR_MALDO5.048e-5143.64Polygalacturonase OS=Malus domestica PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-011-A05-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680431 ID=EY680431; Name=EY680431; organism=Citrus sinensis; type=EST; length=837bp
CCACGCGTCCGAAGCCCCAACGCCGATAAGAAGTGAACTATCTGGGAAAA
TGCCAAGCATCAAGCCAACAGCTTTGAGGTTCTACGGGAGTTTTAATGTT
ACAGTTACCGGAATAACAATTCAAAACAGTCCGCAATGCCACCTCAAGTT
TGATAATTGCATTGGAGTTGTGGTACATGATGTGAGCGTTTCATCGCCTG
GTGATAGTCCCAACACAGATGGAATTCACCTGCAAAACTCCAAGGATGTG
CTAATTCATACTTCCAATCTTGCATGCGGAGACGACTGTGTTTCTATTCA
GACTGGATGCTCAAATGTATACGTACATAATGTGAACTGTGGTCCAGGAC
ATGGAATCAGCATTGGAAGTCTGGGAAAAGATAACACCAAAGCATGTGTC
TCAAACATTACTGTCCGAGATGTCATGATGCATAACACAATGAATGGTGT
CAGAATCAAGACTTGGCAGGGTGGATCAGGTTCTGTGCAGGGGGTACTTT
TCTCAAACATTCAAGTTTCTGAGGTCCAACTTCCAATTGTGATTGACCAA
TTCTATTGTGACAAAAGTACATGCAAGAACCAAACATCAGCTGTGGCTCT
ATCAAGAATCACCTATGAAAGAGTTAAAGGGACATACACAGTAAAACCAG
TACACTTTGCCTGCAGTGACAGCCTTCCATGTGTAGATGTAACTCTATCG
GTTATAAAGCTAAAACCAGTGAAAAAACGCCACCCCATGTATGAATCCCC
ATGGCGGGGAGGCATTTGGGGAATCCACCCCCCCCAACTCCCCCCCCCAA
TGGCTGGTTTACAAACGGGCAAACCCCCCAACAAAAA
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