FC871306

Overview
NameFC871306
Unique NameFC871306
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length477
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4904 contig Csv1_Contig4904:451..927. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC871306 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 5.486e-15
Identity = 47/124 (37.90%), Postives = 68/124 (54.84%), Query Frame = 2
Query:    2 GSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXX-PRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGRE 370
            GS++ HLYGP    R  L +  RL +                PR++H+D K++N+L+D+D  AKV+D GL     + D +  ++ V     +L  E     + +EKSDVYSFGV LLEL+ GRE
Sbjct:  685 GSLADHLYGPRS-KRHSLNWVSRLKVAVDAAKGLDYLHNGSEPRIIHRDVKSSNILLDKDMNAKVSDFGLSKQFTKADASHITTVVKGTAGYLDPEYYSTLQLTEKSDVYSFGVVLLELICGRE 807          
BLAST of FC871306 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 9.358e-15
Identity = 46/126 (36.51%), Postives = 75/126 (59.52%), Query Frame = 2
Query:    2 GSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXX-PRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI-FLASEVKEFRRFSEKSDVYSFGVFLLELVSGREA 373
            GS+  HL+G ++  +++L++  R++I                P V+H+D K++N+L+DE+  A+VAD GL + LG  D   P +++ A  + +L  E       + KSDVYSFGV LLE++SGR+A
Sbjct:  593 GSLHNHLHGKNKALKEQLDWVKRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGL-SLLGPVDSGSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKA 717          
BLAST of FC871306 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.085e-14
Identity = 48/126 (38.10%), Postives = 72/126 (57.14%), Query Frame = 2
Query:    2 GSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXX-PRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEI-FLASEVKEFRRFSEKSDVYSFGVFLLELVSGREA 373
            GS+  HL+G     +++L +  R++I                P V+H+D K++N+L+DED  A+VAD GL + LG  D   P S++ A  + +L  E       + KSDVYSFGV LLE++SGR+A
Sbjct:  586 GSLYQHLHGKDPNLKKRLNWARRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEDHNARVADFGL-SILGPADSGTPLSELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVVLLEILSGRKA 710          
BLAST of FC871306 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 8.759e-13
Identity = 33/80 (41.25%), Postives = 51/80 (63.75%), Query Frame = 2
Query:  128 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGR 367
            R++H+D K +N+L+D +   KVAD G+       +  G +S+V     ++A E   + +FS KSDVYSFGV LLE++SG+
Sbjct:  465 RIIHRDLKASNILLDAEMNPKVADFGMARLFDMDETRGQTSRVVGTYGYMAPEYATYGQFSTKSDVYSFGVMLLEMISGK 544          
BLAST of FC871306 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 1.144e-12
Identity = 47/124 (37.90%), Postives = 69/124 (55.65%), Query Frame = 2
Query:    2 GSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPR-VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGRE 370
            GS+   LYG +   R+ L++  RLSI                R V+H+D K++N+L+D+   AKVAD G   +  +   +  S +V     +L  E  + ++ SEKSDV+SFGV LLE+VSGRE
Sbjct:  675 GSLLDRLYGEAS-KRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDQSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGRE 797          
BLAST of FC871306 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.548e-12
Identity = 47/124 (37.90%), Postives = 67/124 (54.03%), Query Frame = 2
Query:    2 GSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPR-VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGRE 370
            GS+   LYG     R+ L++  RLSI                R V+H+D K++N+L+D    AKVAD G   +  +   +  S +V     +L  E  + ++ SEKSDV+SFGV LLE+VSGRE
Sbjct:  674 GSLLDRLYG-EPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGRE 796          
BLAST of FC871306 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.548e-12
Identity = 33/81 (40.74%), Postives = 50/81 (61.73%), Query Frame = 2
Query:  128 RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGRE 370
            R++H+D K +N+L+D +   KVAD G+       +  G +S+V     ++A E     +FS KSDVYSFGV LLE++SG +
Sbjct:  460 RIIHRDLKASNILLDAEMNPKVADFGMARLFNMDETRGETSRVVGTYGYMAPEYVRHGQFSAKSDVYSFGVMLLEMISGEK 540          
BLAST of FC871306 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.328e-12
Identity = 45/124 (36.29%), Postives = 64/124 (51.61%), Query Frame = 2
Query:    2 GSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREA 373
            GS+  HL+   +   Q L +  R+ +                +V+++DFK AN+L+D DF AK++D GL       D    S++V     + A E     R + KSDVYSFGV LLEL+SGR A
Sbjct:  175 GSLENHLF---RRGAQPLTWAIRMKVAVGAAKGLTFLHEAKSQVIYRDFKAANILLDADFNAKLSDFGLAKAGPTGDNTHVSTKVIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELISGRRA 295          
BLAST of FC871306 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.328e-12
Identity = 52/161 (32.30%), Postives = 78/161 (48.45%), Query Frame = 2
Query:    2 GSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREAXXXXXXXXXXXXVELVQ----NSRDFSNLLKILDERL 472
            GS+  HL+    +  Q L +K RL +                RV+++DFKT+N+L+D ++ AK++D GL       D +  S++V     + A E       + KSDVYSFGV LLEL+SGR A            VE  +    N R    + +++D RL
Sbjct:  157 GSLENHLFRRG-LYFQPLSWKLRLKVALGAAKGLAFLHSSETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLVNKR---KIFRVIDNRL 313          
BLAST of FC871306 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 5.677e-12
Identity = 38/83 (45.78%), Postives = 54/83 (65.06%), Query Frame = 2
Query:  125 PRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSFGVFLLELVSGREA 373
            P ++H+D K +N+L+DE F AKVAD GL  F     +   S++V     ++A E   + + +EKSDVYSFGV LLEL+S R+A
Sbjct:  406 PSIIHRDIKASNILLDERFEAKVADFGLAKF-NPEGMTHMSTRVAGTMGYVAPEYALYGQLTEKSDVYSFGVVLLELLSRRKA 487          
The following BLAST results are available for this feature:
BLAST of FC871306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
Y5487_ARATH5.486e-1537.90Probable LRR receptor-like serine/threonine-protei... [more]
ACR4_ARATH9.358e-1536.51Serine/threonine-protein kinase-like protein ACR4 ... [more]
CRI4_MAIZE2.085e-1438.10Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
CRK37_ARATH8.759e-1341.25Cysteine-rich receptor-like protein kinase 37 OS=A... [more]
NORK_MEDTR1.144e-1237.90Nodulation receptor kinase OS=Medicago truncatula ... [more]
NORK_PEA2.548e-1237.90Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
CRK36_ARATH2.548e-1240.74Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
APK2A_ARATH3.328e-1236.29Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
APK1A_ARATH3.328e-1232.30Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
RKF3_ARATH5.677e-1245.78Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2BE02FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK2BE02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871306 ID=FC871306; Name=FC871306; organism=Citrus sinensis; type=EST; length=477bp
TGGAAGTGTTTCCATTCACCTGTATGGACCCAGTCAAGTTTCCCGACAGA
AGCTAGAGTTCAAGCATAGACTTTCAATAGCTCTTGGGGCAGCTAAAGGT
CTGGCTCATCTTCACTCCCTGAGTCCACGTGTAGTACATAAGGATTTTAA
AACAGCAAATGTTCTTGTTGATGAAGATTTCATAGCTAAGGTTGCAGATG
CAGGACTTCGTAATTTTCTAGGGAGAACCGATGTTGCAGGGCCATCCTCA
CAAGTGACAGCAGATGAGATATTTCTTGCTTCAGAGGTGAAAGAGTTCAG
AAGATTTTCAGAAAAAAGTGATGTGTATAGTTTTGGGGTTTTTCTTTTGG
AGCTAGTAAGCGGGCGAGAAGCATCATCTTCACTGTCTCCAGATTCCAGT
CAGGACCTGGTTGAATTGGTGCAAAACAGTCGAGATTTTAGCAATCTTTT
GAAAATCCTTGATGAGAGATTGTGGAG
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