FC871302

Overview
NameFC871302
Unique NameFC871302
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length661
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6855 contig Csv1_Contig6855:105..764. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC871302 vs. ExPASy Swiss-Prot
Match: PRU1_PRUAR (Major allergen Pru ar 1 OS=Prunus armeniaca PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.094e-41
Identity = 84/158 (53.16%), Postives = 107/158 (67.72%), Query Frame = 1
Query:    1 VLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANPNA 474
            V T   E TS +PPEKLFK F+L  D L+PKV P  VK  E++ GDGG G+IKK  F EG+ + Y KHRVD +DK+N  Y+YT I  EGDA    I++++Y+ K+V +PDGGS       ++ K   EIKEEQVKAG EK  G+FK +EAY LANP+A
Sbjct:    3 VFTYETEFTSVIPPEKLFKAFILDADNLIPKVAPTAVKGTEILEGDGGVGTIKKVTFGEGSQYAYVKHRVDGIDKDNLSYSYTLI--EGDALSDVIENIAYDIKLVASPDGGSIVKTTSHYHTKGDVEIKEEQVKAGKEKAAGLFKLVEAYLLANPDA 158          
BLAST of FC871302 vs. ExPASy Swiss-Prot
Match: PRU1_PRUAV (Major allergen Pru av 1 OS=Prunus avium GN=PRUA1 PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.115e-38
Identity = 78/158 (49.37%), Postives = 106/158 (67.09%), Query Frame = 1
Query:    1 VLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANPNA 474
            V T  +E TS +PP +LFK FVL  D L+PK+ PQ +K+ E++ GDGGPG+IKK  F EG+ + Y KH++D++DKEN  Y+YT I  EGDA   T++ +SYETK+V +P GGS       ++ K   EIKEE VKAG EK   +FK +E Y   +P+A
Sbjct:    3 VFTYESEFTSEIPPPRLFKAFVLDADNLVPKIAPQAIKHSEILEGDGGPGTIKKITFGEGSQYGYVKHKIDSIDKENYSYSYTLI--EGDALGDTLEKISYETKLVASPSGGSIIKSTSHYHTKGNVEIKEEHVKAGKEKASNLFKLIETYLKGHPDA 158          
BLAST of FC871302 vs. ExPASy Swiss-Prot
Match: MAL12_MALDO (Major allergen Mal d 1 OS=Malus domestica PE=1 SV=3)

HSP 1 Score: 150.214 bits (378), Expect = 8.835e-36
Identity = 77/158 (48.73%), Postives = 104/158 (65.82%), Query Frame = 1
Query:    1 VLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANPNA 474
            V T   E TS +PP +LFK FVL  D L+PK+ PQ +K+ E++ GDGGPG+IKK  F EG+ + Y KH++D++D+ N  Y YT I  EGDA   TI+ VSYETK+V +   GS    +  ++ K   EIKEE VKAG EK  G+FK +E+Y   +P+A
Sbjct:    3 VYTFENEYTSEIPPPRLFKAFVLDADNLIPKIAPQAIKHAEILEGDGGPGTIKKITFGEGSQYGYVKHKIDSVDEANYSYAYTLI--EGDALTDTIEKVSYETKLVAS-GSGSIIKSISHYHTKGDVEIKEEHVKAGKEKAHGLFKLIESYLKGHPDA 157          
BLAST of FC871302 vs. ExPASy Swiss-Prot
Match: MAL11_MALDO (Major allergen Mal d 1 OS=Malus domestica GN=MALD1 PE=1 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 9.768e-35
Identity = 76/160 (47.50%), Postives = 105/160 (65.62%), Query Frame = 1
Query:    1 VLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYETKVVGTPDGGSKSTV--VIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANPNA 474
            V T   E TS +PP +LFK FVL  D L+PK+ PQ +K  E++ G+GGPG+IKK  F EG+ + Y KHR+D++D+ +  Y+YT I  EGDA   TI+ +SYETK+V     GS ST+  +  ++ K   EIKEE VK G EK  G+FK +E+Y   +P+A
Sbjct:    3 VYTFENEFTSEIPPSRLFKAFVLDADNLIPKIAPQAIKQAEILEGNGGPGTIKKITFGEGSQYGYVKHRIDSIDEASYSYSYTLI--EGDALTDTIEKISYETKLVAC---GSGSTIKSISHYHTKGNIEIKEEHVKVGKEKAHGLFKLIESYLKDHPDA 157          
BLAST of FC871302 vs. ExPASy Swiss-Prot
Match: PYRC1_PYRCO (Major allergen Pyr c 1 OS=Pyrus communis GN=PYRC1 PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.712e-34
Identity = 76/158 (48.10%), Postives = 105/158 (66.46%), Query Frame = 1
Query:    7 TLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYETKVVGTPDGGSKSTV--VIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANPNA 474
            T   E TS +PP +LFK FVL  D L+PK+ PQ +K+ E++ G+GGPG+IKK  F EG+ + Y KHRVD++D+ +  Y YT I  EGDA   TI+ +SYE K+V +   GS ST+  +  ++ K   EIKEE VKAG EK  G+FK +E+Y   +P+A
Sbjct:    5 TFENEFTSEIPPPRLFKAFVLDADNLIPKIAPQAIKHAEILEGNGGPGTIKKITFGEGSQYGYVKHRVDSIDEASYSYAYTLI--EGDALTDTIEKISYEAKLVAS---GSGSTIKSISHYHTKGDIEIKEEHVKAGKEKAHGLFKLIESYLKDHPDA 157          
BLAST of FC871302 vs. ExPASy Swiss-Prot
Match: BEV1G_BETVE (Major pollen allergen Bet v 1-G OS=Betula verrucosa GN=BETV1G PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.560e-32
Identity = 74/160 (46.25%), Postives = 101/160 (63.12%), Query Frame = 1
Query:    1 VLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEG--EGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANPNA 474
            V    +E TS +P  +LFK F+L  D L+PKV PQ + +VE I G+GGPG+IKK NF EG  +KY K RVD +D  N  YNY+ IEG   GD    T++ +S E K+V TPDGG    +  K++ K   E+K EQVKA  E  + + +A+E+Y LA+ +A
Sbjct:    3 VFNYESETTSVIPAARLFKAFILEGDNLIPKVAPQAISSVENIEGNGGPGTIKKINFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPVGD----TLEKISNEIKIVATPDGGCVLKISNKYHTKGNHEVKAEQVKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of FC871302 vs. ExPASy Swiss-Prot
Match: BEV1D_BETVE (Major pollen allergen Bet v 1-D/H OS=Betula verrucosa GN=BETV1D PE=1 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 4.537e-32
Identity = 74/160 (46.25%), Postives = 100/160 (62.50%), Query Frame = 1
Query:    1 VLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEG--EGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANPNA 474
            V     E TS +P  +LFK F+L  D L+PKV PQ + +VE I G+GGPG+IKK NF EG  +KY K RVD +D  N  YNY+ IEG   GD    T++ +S E K+V TPDGG    +  K++ K   E+K EQVKA  E  + + +A+E+Y LA+ +A
Sbjct:    3 VFNYEIETTSVIPAARLFKAFILDGDNLVPKVAPQAISSVENIEGNGGPGTIKKINFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPVGD----TLEKISNEIKIVATPDGGCVLKISNKYHTKGNHEVKAEQVKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of FC871302 vs. ExPASy Swiss-Prot
Match: BEV1L_BETVE (Major pollen allergen Bet v 1-L OS=Betula verrucosa GN=BETV1L PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 7.740e-32
Identity = 73/160 (45.62%), Postives = 100/160 (62.50%), Query Frame = 1
Query:    1 VLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEG--EGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANPNA 474
            V     E TS +P  ++FK F+L  D L+PKV PQ + +VE I G+GGPG+IKK NF EG  +KY K RVD +D  N  YNY+ IEG   GD    T++ +S E K+V TPDGG    +  K++ K   E+K EQVKA  E  + + +A+E+Y LA+ +A
Sbjct:    3 VFNYETEATSVIPAARMFKAFILDGDKLVPKVAPQAISSVENIEGNGGPGTIKKINFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPVGD----TLEKISNEIKIVATPDGGCVLKISNKYHTKGNHEVKAEQVKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of FC871302 vs. ExPASy Swiss-Prot
Match: BEV1A_BETVE (Major pollen allergen Bet v 1-A OS=Betula verrucosa GN=BETVIA PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 7.740e-32
Identity = 74/160 (46.25%), Postives = 100/160 (62.50%), Query Frame = 1
Query:    1 VLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGE--GDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANPNA 474
            V     E TS +P  +LFK F+L  D L PKV PQ + +VE I G+GGPG+IKK +F EG  +KY K RVD +D  N  YNY+ IEG   GD    T++ +S E K+V TPDGGS   +  K++ K   E+K EQVKA  E  + + +A+E+Y LA+ +A
Sbjct:    3 VFNYETETTSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPIGD----TLEKISNEIKIVATPDGGSILKISNKYHTKGDHEVKAEQVKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of FC871302 vs. ExPASy Swiss-Prot
Match: BEV1C_BETVE (Major pollen allergen Bet v 1-C OS=Betula verrucosa GN=BETV1C PE=1 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 2.252e-31
Identity = 71/158 (44.94%), Postives = 101/158 (63.92%), Query Frame = 1
Query:    1 VLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANPNA 474
            V    +E TS +P  +LFK F+L  DTL+PKV PQ + +VE I G+GGPG+IKK  F EG+ +KY K RVD +D  N  Y+Y+ I  EG A   T++ +  E K+V TPDGGS   +  K++ K   E+K E +KA  EK + + +A+E+Y LA+ +A
Sbjct:    3 VFNYESETTSVIPAARLFKAFILEGDTLIPKVAPQAISSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDHANFKYSYSMI--EGGALGDTLEKICNEIKIVATPDGGSILKISNKYHTKGDQEMKAEHMKAIKEKGEALLRAVESYLLAHSDA 158          
The following BLAST results are available for this feature:
BLAST of FC871302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
PRU1_PRUAR4.094e-4153.16Major allergen Pru ar 1 OS=Prunus armeniaca PE=1 S... [more]
PRU1_PRUAV1.115e-3849.37Major allergen Pru av 1 OS=Prunus avium GN=PRUA1 P... [more]
MAL12_MALDO8.835e-3648.73Major allergen Mal d 1 OS=Malus domestica PE=1 SV=... [more]
MAL11_MALDO9.768e-3547.50Major allergen Mal d 1 OS=Malus domestica GN=MALD1... [more]
PYRC1_PYRCO3.712e-3448.10Major allergen Pyr c 1 OS=Pyrus communis GN=PYRC1 ... [more]
BEV1G_BETVE1.560e-3246.25Major pollen allergen Bet v 1-G OS=Betula verrucos... [more]
BEV1D_BETVE4.537e-3246.25Major pollen allergen Bet v 1-D/H OS=Betula verruc... [more]
BEV1L_BETVE7.740e-3245.63Major pollen allergen Bet v 1-L OS=Betula verrucos... [more]
BEV1A_BETVE7.740e-3246.25Major pollen allergen Bet v 1-A OS=Betula verrucos... [more]
BEV1C_BETVE2.252e-3144.94Major pollen allergen Bet v 1-C OS=Betula verrucos... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAK2BD07FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK2BD07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871302 ID=FC871302; Name=FC871302; organism=Citrus sinensis; type=EST; length=661bp
GTTCTCACGTTGAATGCAGAGGAAACAAGCACTCTCCCCCCTGAAAAGTT
GTTCAAACTTTTTGTCCTTCATTTCGACACCCTTCTGCCCAAAGTCCTGC
CTCAGGTTGTAAAGAACGTTGAATTGATTTCAGGGGATGGAGGCCCTGGA
AGCATCAAGAAGTTTAACTTTGTTGAAGGTGCTGATTGGAAGTACTTTAA
GCATAGGGTTGATGCATTGGACAAAGAGAACAAGATATACAATTACACGG
CAATTGAAGGTGAGGGTGATGCTAACATCCCTACTATTGATCATGTTTCT
TATGAGACTAAGGTTGTGGGCACCCCTGACGGAGGAAGCAAGAGCACCGT
TGTTATCAAGTTCTATCCCAAACCAGGTGCCGAGATTAAGGAAGAGCAGG
TTAAGGCAGGCTTGGAAAAGGAGAAGGGAATTTTTAAGGCTCTGGAAGCC
TATGCCTTGGCAAACCCGAATGCCGTATAAGCTCTTACATCAACACTTCA
CCGCACTTGCGTCGCCTTTGTTGCAACATTATGAATAATCATGTTTATGG
CTTCCGTATGTCGTGTCTCTTTGTTTTCAAATATGCCAATTTATATAATT
GGCTTTTGGCTAAATAAAAAAAAAAAAAAAGAGTTTGCTTTAAAAAAAAA
AAAAAAAAAAA
back to top