EY678997

Overview
NameEY678997
Unique NameEY678997
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length911
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY678997 vs. ExPASy Swiss-Prot
Match: XTH9_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 9 OS=Arabidopsis thaliana GN=XTH9 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 5.099e-15
Identity = 42/81 (51.85%), Postives = 56/81 (69.14%), Query Frame = 2 
Query:   95 MAKMSLIFSLFVGLLMVV----LVNSAKFDDLYQTSWVIDHVQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIHIILCKG 325
            M  M L   + + +++VV     V+ AKFD+LY++SW +DH   +G+  KL LDNYSGAGF S+SKYLFGKVSI I L +G
Sbjct:    1 MVGMDLFKCVMMIMVLVVSCGEAVSGAKFDELYRSSWAMDHCVNEGEVTKLKLDNYSGAGFESRSKYLFGKVSIQIKLVEG 81
The following BLAST results are available for this feature:
BLAST of EY678997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
XTH9_ARATH5.099e-1551.85Xyloglucan endotransglucosylase/hydrolase protein ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-053-G11-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY678997 ID=EY678997; Name=EY678997; organism=Citrus sinensis; type=EST; length=911bp
CCACCGCGTCCGCTTCAACTTCCCTCCACTTCACTGGTGTTTGCTCTGCT
CATTCGCTTACTTCCTCTCCCCGTTCTTCTGTCTTCATTCTTCAATGGCT
AAAATGTCTTTGATTTTCAGTCTGTTTGTGGGTCTTTTAATGGTGGTTTT
GGTCAACTCAGCTAAGTTTGATGATCTTTATCAAACAAGCTGGGTTATTG
ATCATGTTCAGTATGATGGGGACACTCTCAAGCTTAATCTCGATAATTAT
TCCGGAGCTGGGTTTGCGTCAAAGAGCAAGTATTTGTTTGGGAAAGTCTC
CATCCATATTATACTTTGTAAGGGGTGACTCTGCTTGGAACTGTCACTGC
CTTCTAAGTAACACACACTATCATCATTTCTGCTTATAACTAACTCACTC
TACCTGGTTTAACTTTGGTAATCAAGATGGGAGAAGGGACATCATTCTTA
ATGTCCATTACATACTCCTATTCATAATTCTTCTCCAAAGCAATGATAAA
CTTGACATTTATAAATAAAATAAAAAAAAAACACCCGGCTATTTTATTCA
TATCAAAAAACACAAGAAGCTAAATAGTAATAATCCCAATTACATAACCA
TGATCATATGTTGTACTCCCTCAACCAATATAATATAAGTACTTAATTTA
TAATATTTAATCTACTACAATTCTCAACCTACTACAAACCTCATGAACAA
AAAAAATATACACCCCCATAACAAATACCACACGCTACAAAAAAAAAGGG
ATCACACATCTCAAAAAACCCAAAAAATATAAAAATAATGGGTGATATCT
TTCCCAAACCCGATCAAAGTAATGTGGGATTATAAAATTAAATACTATCT
TCACACATGTCCATTTTTAATACTATCTACACCACAAATAGCACACCCTC
ACCGTCATCTC
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