EY678996

Overview
NameEY678996
Unique NameEY678996
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY678996 vs. ExPASy Swiss-Prot
Match: XYLX_PSEPU (Toluate 1,2-dioxygenase subunit alpha OS=Pseudomonas putida GN=xylX PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 3.081e-44
Identity = 82/123 (66.67%), Postives = 100/123 (81.30%), Query Frame = -2
Query:   84 FHGRTISNAGKKLKVKDAKTGAYPDSFDCDGSHDLKRLGRFENYRGFLLGSLSETVPELSDYLGETRVIIDQMVDQAPLGLEVLRGT*SYEYDGNWKLQIENGADGYHVSSVHRNYSATMNRR 452
            FHG T SN+GK LKVKD K   YPDSFDCDGSHDLK++ RF +YRGFL GSL E V  L ++LGE+R +ID +VDQ+P GLEVLRG+ +Y Y+GNWK+Q+ENGADGYHVS+VH NY+AT  +R
Sbjct:  114 FHGWTFSNSGKLLKVKDPKGAGYPDSFDCDGSHDLKKVARFASYRGFLFGSLREDVAPLEEFLGESRKVIDMVVDQSPEGLEVLRGSSTYVYEGNWKVQVENGADGYHVSTVHWNYAATQQQR 236          
BLAST of EY678996 vs. ExPASy Swiss-Prot
Match: BENA_ACIAD (Benzoate 1,2-dioxygenase subunit alpha OS=Acinetobacter sp. (strain ADP1) GN=benA PE=3 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 6.649e-39
Identity = 76/124 (61.29%), Postives = 92/124 (74.19%), Query Frame = -2
Query:   84 PFHGRTISNAGKKLKVKDAKTGAYPDSFDCDGSHDLKRLGRFENYRGFLLGSLSETVPELSDYLGETRVIIDQMVDQAPLGLEVLRGT*SYEYDGNWKLQIENGADGYHVSSVHRNYSATMNRR 455
            PFHG T +N+GK LKVKD     Y D F+ DGSHDLK++ RFE+Y+GFL GSL+  VP L ++LGET  IID +V Q+  GLEVLRG  +Y Y+GNWKL  ENGADGYHVS+VH NY+AT   R
Sbjct:  116 PFHGWTFNNSGKLLKVKDPSDAGYSDCFNQDGSHDLKKVARFESYKGFLFGSLNPDVPSLQEFLGETTKIIDMIVGQSDQGLEVLRGVSTYTYEGNWKLTAENGADGYHVSAVHWNYAATTQHR 239          
BLAST of EY678996 vs. ExPASy Swiss-Prot
Match: CBDA_BURCE (2-halobenzoate 1,2-dioxygenase large subunit OS=Burkholderia cepacia GN=cbdA PE=1 SV=3)

HSP 1 Score: 159.073 bits (401), Expect = 3.300e-38
Identity = 75/124 (60.48%), Postives = 92/124 (74.19%), Query Frame = -2
Query:   81 FHGRTISNAGKKLKVKDAKTGAYPDSFDCDGSHDLKRLGRFENYRGFLLGSLSETVPELSDYLGETRVIIDQMVDQAPLGLEVLRGT*SYEYDGNWKLQIENGADGYHVSSVHRNYSATMNRRN 452
            FHG T SN GK LKVKD +   YP+ F+ DGSHDL R+  F NYRGFL GS++     + ++LG ++ I+DQ++DQ P  LEVLRG+ SY YDGNWKLQIENGADGYHV SVH NY AT+ RR+
Sbjct:  120 FHGWTFSNTGKLLKVKDGQDDNYPEGFNVDGSHDLTRIPSFANYRGFLFGSMNPDACPIEEHLGGSKAILDQVIDQTPGELEVLRGSSSYIYDGNWKLQIENGADGYHVGSVHWNYVATIGRRD 243          
The following BLAST results are available for this feature:
BLAST of EY678996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
XYLX_PSEPU3.081e-4466.67Toluate 1,2-dioxygenase subunit alpha OS=Pseudomon... [more]
BENA_ACIAD6.649e-3961.29Benzoate 1,2-dioxygenase subunit alpha OS=Acinetob... [more]
CBDA_BURCE3.300e-3860.482-halobenzoate 1,2-dioxygenase large subunit OS=Bu... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-053-G10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY678996 ID=EY678996; Name=EY678996; organism=Citrus sinensis; type=EST; length=915bp
TCTCTTGGGTTCTCTTTTTGTACCGTTCTCGGTCCGGTTCGGAATTCCCG
GGTCTAGGTGCGCGTGCCTTCGGCTTCGTAGTTGCGGCGGTTCATGGTCG
CCGAGTAATTCCTGTGCACGGAGCTGACGTGATAACCGTCGGCGCCGTTT
TCGATCTGCAGCTTCCAGTTGCCGTCATACTCATACGATTAAGTGCCCCG
CAGCACTTCCAGGCCCAGCGGTGCCTGGTCCACCATCTGGTCGATGATCA
CCCGGGTTTCCCCCAGGTAGTCGCTGAGTTCCGGCACCGTCTCGCTGAGG
CTGCCTAATAGGAAGCCGCGATAATTTTCGAATCGGCCAAGGCGCTTCAG
GTCGTGGGAGCCGTCACAGTCGAAACTGTCGGGGTAGGCGCCGGTCTTGG
CATCCTTCACTTTGAGCTTCTTGCCTGCGTTGCTGATTGTCCTGCCATGG
AACGGGTCAGGTAAACAAGCCTTTGTTGCCTTGCTTTATGCTGCTGAGCT
TGGCCGCCACGGTGGGCTCCGGTGTTTCACCAGTCCGTGCGTTGTGCCTT
GCTTTTTCCCGGGTGTTGGCTCTCGCGGCTGGTCGCCCATCCCTGGGTGT
GAGTATCCTTTGATTTCCGGCCTCTGGTTTTTCATGGCCTTTGCTTACGC
CCCTGCCTTTCGTAAATGAGCTTTTTCTCCCGGGGAATCTTTGCGGGGGT
CGCTGTAAATATACGGCGGCGGCTTCTGTATACCCCGGCCGGGGGGATTT
TTCGTTGTCGTGAGCTTGCTTTTTTTTTGTTTTATGTTCATTCCTATGTT
TCTATTTAGGTGTGTCATCCCTTGTTTTCTTCTTTTTGGTTGGTGCCCCC
ATATTTTTTGTTCCTGACCTTTTCCGTCCCATTTCCCTCTGACGGTCTTT
TCTCTCTTCTCTCTT
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