FC871290
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC871290 vs. ExPASy Swiss-Prot
Match: Y5620_ARATH (Putative RNA methyltransferase At5g10620 OS=Arabidopsis thaliana GN=At5g10620 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.847e-36 Identity = 78/145 (53.79%), Postives = 100/145 (68.97%), Query Frame = 3 Query: 39 KRALAGPVLEDENIGKLKYYCKVEDLQLRASPKNTGDVKAQIKDEDMAVMNIISSDEW--------------------------GASRISFCIGGPYGHGPKMRERANISIKLSSMVLNHQIALLVLVEQLYRSWTILKGQNYHH 395 KR+ +L DE KLK YC ED +R++P+N DV+AQ++DE++A+M +I SD+W GASRISFCIGG YGHG ++R+RAN++I+LSSMVLNHQIAL+VL+EQLYRSWTILKGQNYHH Sbjct: 49 KRSEGVRLLVDEYKIKLKPYCSFEDSLVRSNPRNAQDVRAQVEDEEVAMMKLIGSDDWVVVLDERGRDIDSEQMAELLGDAGNSGASRISFCIGGAYGHGTQVRKRANVTIRLSSMVLNHQIALVVLMEQLYRSWTILKGQNYHH 193
BLAST of FC871290 vs. ExPASy Swiss-Prot
Match: RLMH_CYTH3 (Ribosomal RNA large subunit methyltransferase H OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=rlmH PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.813e-11 Identity = 46/131 (35.11%), Postives = 66/131 (50.38%), Query Frame = 3 Query: 84 KLKYYCKVEDLQLRASPKNT---GDVKAQ---------IKDEDMAVM-----NIISSDEWG----------ASRISFCIGGPYGHGPKMRERANISIKLSSMVLNHQIALLVLVEQLYRSWTILKGQNYHH 395 +L +Y E L++ PKNT DV + ++D D ++ N +S E+G A + F IGGPYG + +RAN I LS M +HQ+ L +EQLYR+ TI+KG+ YHH Sbjct: 26 RLPHYLPFEYLEI-PEPKNTKLSSDVLKKEEEKLIFDRLQDSDQLILLDEKGNEFTSTEFGQYIQKKMNSVAGNLIFLIGGPYGFSDAVYKRANGKIALSKMTFSHQMVRLFALEQLYRACTIIKGEKYHH 155 The following BLAST results are available for this feature:
BLAST of FC871290 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC871290 ID=FC871290; Name=FC871290; organism=Citrus sinensis; type=EST; length=675bpback to top |