DY257261

Overview
NameDY257261
Unique NameDY257261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1312
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6567 contig Csv1_Contig6567:1..1312. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY257261 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 2.623e-40
Identity = 86/160 (53.75%), Postives = 111/160 (69.38%), Query Frame = 2
Query:  110 GYPDKKPELTRPVLGG-KQNPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDP---DLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAI-DDTGDNILLFETPETMVRDKFFWFKDEEFSQ 574
            G PD   +L RPVLGG KQ PYPRRCRTGRP    D  SE R+GN YVPRDE FSEVK   F  KT+ SVLHA VP+ ++A +D    +L FP F  ID LF +GV LP +++ GF ++++PRL++ + D  GD ILLF+TP  + +DKF W +DEEF++
Sbjct:  287 GNPDSNGDLARPVLGGSKQFPYPRRCRTGRPPSKKDPKSETRKGNVYVPRDEEFSEVKNAQFLLKTLQSVLHAAVPAAQSALIDNLSLNLPFPSFFVIDKLFEDGVELPGVEKLGFLHSIVPRLLELLRDSPGDKILLFDTPANVQKDKFAWLRDEEFAR 446          
BLAST of DY257261 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 8.732e-36
Identity = 75/156 (48.08%), Postives = 102/156 (65.38%), Query Frame = 2
Query:  110 GYPDKKPELTRPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREGN-FYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIDDTGDNILLFETPETMVRDKFFWFKDEEFSQ 574
            G PD  PEL RPV+GG  +PYPRRC+TGR  C+TD  SE+R G  FYVPRDE FS  K  +F+ K V + L ++ P +E+  + P   FP+F AI  LF EG+ LP  K  G    LLPR++KA+ +  D+IL F+ P  + RD+F W +D+EF++
Sbjct:  250 GDPDNDPELARPVIGGLTHPYPRRCKTGRKPCETDPSSEQRYGGEFYVPRDEEFSTAKGTSFTGKAVLAALPSIFPQIESVLLSPQEPFPHFKAIQNLFEEGIQLP--KDAGLL-PLLPRIIKALGEAQDDILQFDAPVLINRDRFSWLRDDEFAR 402          
BLAST of DY257261 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 4.334e-35
Identity = 77/159 (48.43%), Postives = 108/159 (67.92%), Query Frame = 2
Query:  110 GYPDKKPELTRPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEG----FWNTLLPRLVKAIDDTGDNILLFETPETMVRDKFFWFKDEEFSQ 574
            G PDK  +  RPVLG K++PYPRRCRTGRP+   D  +E R    YVPRDE FS+VK  TFSA T+ S LHA++P++    ++   GF +F AIDAL+++G+ LP     G      N ++PR+V+ I+DT +++L FE PE + RD+F WF+DEEF++
Sbjct:  247 GDPDKNIDHKRPVLGTKEHPYPRRCRTGRPKTLYDPETETRSSPVYVPRDEQFSDVKGRTFSATTLRSGLHAILPAV-APLLNNSHGFSHFPAIDALYSDGIPLPVDGHGGNSFNVINDVIPRVVQMIEDTTEHVLRFEVPEMLERDRFSWFRDEEFAR 404          
BLAST of DY257261 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 7.392e-35
Identity = 81/160 (50.62%), Postives = 104/160 (65.00%), Query Frame = 2
Query:  110 GYPDKKPELTRPVLGG-KQNPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDP---DLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIDDT-GDNILLFETPETMVRDKFFWFKDEEFSQ 574
            G PD   +L RPVLGG KQ PYPRRCRTGRP    D  SE R+GN YVPRDE FS  K+  F  KTV SVL A VP+ ++  +D    +L FP F  ID LF +GV LP + +  F  +++PRL++ + DT  + IL FETP  + +DKF W +DEEF++
Sbjct:  270 GNPDSNGDLARPVLGGNKQFPYPRRCRTGRPPSKKDPKSETRKGNVYVPRDEEFSPEKEDYFLRKTVGSVLQAAVPAAQSLLLDKLKWNLPFPSFFVIDKLFEDGVELPGVDKLNFLESVVPRLLEHLRDTPAEKILRFETPANIQKDKFAWLRDEEFAR 429          
BLAST of DY257261 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 2.721e-29
Identity = 87/237 (36.71%), Postives = 128/237 (54.01%), Query Frame = 2
Query:  110 GYPDKKPELTRPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREGN---FYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLP-PLKQEGFWNTLLPRLVKAIDDTGDNILLFETPETMVRDKFFWFKDEEFSQAFPPLATPV-------FPTVNHSPGN*ETLSDPEIFRSTKIKNNILFFSIINAGEGLPVIE--ETNEHIK---HGLYL 772
            G PD   EL RP LGG++ PYPRRCRTGR   DTD  SE+R       YVPRDE F E KQ TF+A  + +VLH L+PSL+ + +  D  F  F  ID+L+ EG+ L    + + F    LP++V  +  + + +L ++TP+ + +DK+ W +D+EF++       PV       +P V++         DPEI+    + + +    II   +GL V +  ETN       H +YL
Sbjct:  276 GNPDISRELARPTLGGREFPYPRRCRTGRSSTDTDMMSERRVEKPLPMYVPRDEQFEESKQNTFAACRLKAVLHNLIPSLKASILAED--FANFGEIDSLYKEGLLLKLGFQDDMFKKFPLPKIVTTLQKSSEGLLRYDTPKIVSKDKYAWLRDDEFARQAIAGINPVNIERVTSYPPVSN--------LDPEIY-GPGLHSALTEDHIIGQLDGLTVQQALETNRLFMVDYHDIYL 501          
BLAST of DY257261 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 7.916e-29
Identity = 68/158 (43.04%), Postives = 96/158 (60.76%), Query Frame = 2
Query:  110 GYPDKKPELTRPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREGN---FYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIDDTGDNILLFETPETMVRDKFFWFKDEEFSQ 574
            G PDK  E  RP+LGG++ PYPRRCRTGRP  DT+  +E R       YVPRDEAF E+KQ  FS+  + +VLH L+PSL  +       F  F  ID L+ EG+ L    QE  +  +   LV+ I ++ + +L ++TP  + +DKF W +D+EF++
Sbjct:  266 GNPDKGKEFIRPILGGEKIPYPRRCRTGRPPTDTNMLAESRVEKPHPIYVPRDEAFEELKQGAFSSGRLRAVLHTLIPSLIASISAETHNFQGFHHIDNLYKEGLRLKLGLQEHLFQKI--PLVQKIQESSEGMLRYDTPSILSKDKFAWLRDDEFAR 421          
BLAST of DY257261 vs. ExPASy Swiss-Prot
Match: LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 2.547e-27
Identity = 76/166 (45.78%), Postives = 93/166 (56.02%), Query Frame = 2
Query:  119 DKKPELTRPVLGGKQNPYPRRCRTGRPRCDTDQFSEKR--EGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEG--------FWNTLLPRLVK----AIDDTGDNILLFETPETMVRDKFFWFKDEEFSQ 574
            D     TRPVLGGK++PYPRRCRTGRPR   D FSE+R  + + YVPRDEAF+E K   F  K   S LHAL   L+TA       FP  SAID L+++     P++ EG           T L  L K    A  +    +  FETPE   RDKF WF+DEEF++
Sbjct:  269 DDNNPTTRPVLGGKEHPYPRRCRTGRPRSKKDPFSEERSHKEHIYVPRDEAFTERKMGAFDTKKFMSQLHALTTGLKTA-KHKSQSFPSLSAIDQLYDDNFRNQPVQPEGGKLRFVIDLLETELLHLFKLEGAAFLEGIRRVFKFETPEIHDRDKFAWFRDEEFAR 433          
BLAST of DY257261 vs. ExPASy Swiss-Prot
Match: LOX22_HORVU (Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 6.273e-26
Identity = 71/167 (42.51%), Postives = 95/167 (56.89%), Query Frame = 2
Query:  125 KPELTRPVLGGKQNPYPRRCRTGRPRCDTDQFSEK---REGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDL--GFPYFSAIDALFNEGVNLPPLKQEG-----FWNTLLPRLVKAIDDTG-------DNILLFETPETMVRDKFFWFKDEEFSQ 574
            KPE  RPVLGGK++PYPRRCRTGRPR  TD  SE+   ++G  YVPRDE F+E K+  F  K + S LH L   L+   V+ D+   FP  ++IDAL+++     P++ EG       + L   LV  +   G         +  FETPE    DK  WF+DEEF++
Sbjct:  269 KPESKRPVLGGKEHPYPRRCRTGRPRSKTDPSSEEESHKKGEMYVPRDETFTERKEQAFLTKQLLSQLHGLCTGLK---VNKDILPSFPTLASIDALYDDDFRNQPVQPEGGKVRLILDLLAKELVHLVKLEGAEFVEGIRRVFKFETPEIHDMDKLAWFRDEEFAR 432          
BLAST of DY257261 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 8.192e-26
Identity = 68/160 (42.50%), Postives = 98/160 (61.25%), Query Frame = 2
Query:  110 GYPDKKPELTRPVLGGKQNPYPRRCRTGRPRCDTDQFSEKREGN---FYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTL-LPR-LVKAIDDTGDNILLFETPETMVRDKFFWFKDEEFSQ 574
            G PDK  EL+RP LGGK+ PYPRRCRTGR    +D+ +E R       YVPRDE F E KQ TF+A  + +VLH L+PSL+ + V  D  F  F  ID L+ EG+ L    Q+  +    LP+ +V  + ++   +L ++TP+ + +DK  W +D+EF++
Sbjct:  270 GNPDKSSELSRPKLGGKEVPYPRRCRTGRQSTVSDKDAESRVEKPLPMYVPRDEQFEESKQDTFAAGRLKAVLHHLIPSLKASIVAED--FADFGEIDRLYKEGLLLKLGFQDDIFKKFPLPKVVVDTLQESTKGLLKYDTPKILSKDKNAWLRDDEFAR 427          
BLAST of DY257261 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 2.467e-22
Identity = 66/180 (36.67%), Postives = 94/180 (52.22%), Query Frame = 2
Query:  110 GYPDKKPELTRPVLGGKQNPYPRRCRTGRPRCDTDQFSEKR---EGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDL-GFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIDDTGDNILLFETPETMVRDKFFWFKDEEFS---------------QAFPPLA 592
            G PDK     RPVLGG+Q PYPRR RTGRP   TD  +E R       YV RDE F E K    S   + ++LH  +P L ++ V PD+  F  F  +D LF EG+ L     +  +  +    V+ I +  + +L ++TP+ + +DKF W +D+EF+               QAFPP++
Sbjct:  252 GNPDKGVASARPVLGGEQMPYPRRMRTGRPSTATDASAESRVEYPEPIYVSRDEEFEEGKNEMLSEGAIKALLHNFMPLLVSS-VSPDIRDFAGFHDVDNLFKEGLRLKQALHDQLFQKI--PFVRKIQENSEGLLRYDTPDIIKKDKFAWLRDDEFARQALAGINPVNIERLQAFPPVS 428          
The following BLAST results are available for this feature:
BLAST of DY257261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
LOXC2_ORYSJ2.623e-4053.75Probable lipoxygenase 8, chloroplastic OS=Oryza sa... [more]
LOX2_ARATH8.732e-3648.08Lipoxygenase 2, chloroplastic OS=Arabidopsis thali... [more]
LOX23_HORVU4.334e-3548.43Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare... [more]
LOXC1_ORYSJ7.392e-3550.63Lipoxygenase 7, chloroplastic OS=Oryza sativa subs... [more]
LOX4_ARATH2.721e-2936.71Lipoxygenase 4, chloroplastic OS=Arabidopsis thali... [more]
LOX6_ORYSJ7.916e-2943.04Probable lipoxygenase 6 OS=Oryza sativa subsp. jap... [more]
LOX21_HORVU2.547e-2745.78Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare... [more]
LOX22_HORVU6.273e-2642.51Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare... [more]
LOX3_ARATH8.192e-2642.50Lipoxygenase 3, chloroplastic OS=Arabidopsis thali... [more]
LOX5_ORYSJ2.467e-2236.67Putative lipoxygenase 5 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK1DA03FM2 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257261 ID=DY257261; Name=DY257261; organism=Citrus sinensis; type=EST; length=1312bp
CGCTATGTTGTCTTGTCTTCTTGAAGAACACTACTTATCATTGATAATAT
TGTCTTTTGTTTTTATAAGTTGTTTGTTGATCTATTAATGCTTTCCAACA
ATAGTCTCTGGATATCCTGACAAGAAACCTGAATTAACAAGGCCTGTGCT
TGGAGGCAAACAAAACCCTTATCCTAGACGTTGCAGAACTGGACGCCCAC
GGTGTGACACAGATCAATTTTCGGAGAAAAGAGAGGGAAACTTTTATGTT
CCAAGGGATGAAGCATTCTCGGAGGTAAAGCAGCTAACATTTTCAGCAAA
GACGGTGTACTCAGTGTTGCATGCGTTGGTACCATCCTTAGAAACCGCCT
TTGTCGATCCTGATCTGGGGTTTCCATACTTCTCTGCTATTGACGCACTC
TTCAATGAAGGAGTCAACTTGCCTCCACTCAAACAGGAAGGTTTTTGGAA
CACACTGCTTCCCAGATTGGTTAAGGCAATTGATGATACAGGAGATAATA
TTTTGCTGTTTGAAACGCCAGAAACGATGGTCAGAGACAAATTCTTTTGG
TTTAAGGATGAAGAATTTTCACAGGCATTCCCTCCACTAGCTACACCTGT
TTTCCCCACCGTTAATCACAGTCCTGGCAATTGAGAAACCCTCTCTGATC
CGGAAATTTTCCGATCAACCAAAATAAAAAATAATATCTTATTCTTTTCA
ATAATAAATGCGGGGGAGGGACTTCCTGTAATTGAGGAAACGAACGAACA
CATAAAACACGGTTTGTATTTGTAGAGGCTTCGCCCATGTAAATATGATC
CCATACCTACATTTAAATTAAACTATGACCTACATAAGTGTATATCAATG
ATGAATTGAATCTTTTGTTGGTTAGTACTTATTCTTTTTTCACTTCACAG
AATATTTTTACATATATTGTTAGGGCAGTTTTTACGGTGGTGTTAGTAAA
ATAGAAACGCTCCTCTGCTCGAATTTCAGCAAACACGGCACGTGGATGAC
CAAAAAGAATACTTAACTCTCGCCTAATACTCCCGATCAGCCTCTCTCTA
GAGTCTCGCCGACACTCCCCTCTAACTCCCACCTACACAGTATAGATGAG
TTAATAGTACCCCTTTTGGACTAATACTTACAATCCACTCACTATCCCCC
CTCAACAATAATACTCCCATTAACTCAACTATAATTCATTCATACTACCT
GCTAGAAGCAACAGTCCTCTTTCCCTCCAATTAAACAAAAATAACAGCCA
ATACACAATAAACCAACAAAGCGACACCTTCAACACCACTTTCTCCTCCA
TCATCAAGCTAA
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