DY257451

Overview
NameDY257451
Unique NameDY257451
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length731
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2483 contig Csv1_Contig2483:53..782. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY257451 vs. ExPASy Swiss-Prot
Match: PRX2B_ARATH (Peroxiredoxin-2B OS=Arabidopsis thaliana GN=PRXIIB PE=1 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 1.200e-71
Identity = 131/162 (80.86%), Postives = 145/162 (89.51%), Query Frame = 2
Query:   68 VAPIADGDPSPDGILAYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILQAL 553
            +APIA GD  PDG +++FDE DQLQ  SVHSLAAGKKVILFGVPGAFTPTCS+KHVPGFIEKA+ELKSK VDEI+C SVNDPFVMKAW KT+PENK VKF+ADGS +YTH LGLELDL +KGLG RSRRFALL+DDLKV  ANVESGG+FTVSSADDIL+AL
Sbjct:    1 MAPIAVGDVVPDGTISFFDENDQLQTASVHSLAAGKKVILFGVPGAFTPTCSMKHVPGFIEKAEELKSKGVDEIICFSVNDPFVMKAWGKTYPENKHVKFVADGSGEYTHLLGLELDLKDKGLGVRSRRFALLLDDLKVTVANVESGGEFTVSSADDILKAL 162          
BLAST of DY257451 vs. ExPASy Swiss-Prot
Match: PRX2C_ARATH (Peroxiredoxin-2C OS=Arabidopsis thaliana GN=PRXIIC PE=1 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 9.505e-69
Identity = 125/162 (77.16%), Postives = 143/162 (88.27%), Query Frame = 2
Query:   68 VAPIADGDPSPDGILAYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILQAL 553
            +API  GD  PDG +++FDE DQLQ VSVHS+AAGKKVILFGVPGAFTPTCS+ HVPGFI KA+ELKSK +DEI+C SVNDPFVMKAW KT+PENK VKF+ADGS +YTH LGLELDL +KGLG RSRRFALL+D+LKV  ANVESGG+FTVSSA+DIL+AL
Sbjct:    1 MAPITVGDVVPDGTISFFDENDQLQTVSVHSIAAGKKVILFGVPGAFTPTCSMSHVPGFIGKAEELKSKGIDEIICFSVNDPFVMKAWGKTYPENKHVKFVADGSGEYTHLLGLELDLKDKGLGIRSRRFALLLDNLKVTVANVESGGEFTVSSAEDILKAL 162          
BLAST of DY257451 vs. ExPASy Swiss-Prot
Match: PRX2D_ARATH (Peroxiredoxin-2D OS=Arabidopsis thaliana GN=PRXIID PE=1 SV=2)

HSP 1 Score: 255.758 bits (652), Expect = 1.793e-67
Identity = 123/162 (75.93%), Postives = 142/162 (87.65%), Query Frame = 2
Query:   68 VAPIADGDPSPDGILAYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILQAL 553
            +API  GD  PDG +++FDE DQLQ VSVHS+AAGKKVILFGVPGAFTPTCS+ HVPGFI KA+ELKSK +DEI+C SVNDPFVMKAW KT+ ENK VKF+ADGS +YTH LGLELDL +KGLG RSRRFALL+D+LKV  ANVE+GG+FTVSSA+DIL+AL
Sbjct:    1 MAPITVGDVVPDGTISFFDENDQLQTVSVHSIAAGKKVILFGVPGAFTPTCSMSHVPGFIGKAEELKSKGIDEIICFSVNDPFVMKAWGKTYQENKHVKFVADGSGEYTHLLGLELDLKDKGLGIRSRRFALLLDNLKVTVANVENGGEFTVSSAEDILKAL 162          
BLAST of DY257451 vs. ExPASy Swiss-Prot
Match: PRX2C_ORYSJ (Peroxiredoxin-2C OS=Oryza sativa subsp. japonica GN=PRXIIC PE=1 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 7.049e-64
Identity = 118/162 (72.84%), Postives = 139/162 (85.80%), Query Frame = 2
Query:   68 VAPIADGDPSPDGILAYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILQAL 553
            +AP+A GD  PDG L +FD +D+LQQVSVH LAAGKKV+LFGVPGAFTPTCS +HVPGFI +A++LK+K VD+IL +SVNDPFVMKAWAK++PENK VKFLADG   YT ALGLELDLSEKGLG RSRRFALL D+LKV  AN+E GG FT+S A++IL+AL
Sbjct:    1 MAPVAVGDTLPDGQLGWFDGEDKLQQVSVHGLAAGKKVVLFGVPGAFTPTCSNQHVPGFINQAEQLKAKGVDDILLVSVNDPFVMKAWAKSYPENKHVKFLADGLGTYTKALGLELDLSEKGLGIRSRRFALLADNLKVTVANIEEGGQFTISGAEEILKAL 162          
BLAST of DY257451 vs. ExPASy Swiss-Prot
Match: PRX2A_ARATH (Peroxiredoxin-2A OS=Arabidopsis thaliana GN=PRXIIA PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 9.249e-48
Identity = 97/149 (65.10%), Postives = 117/149 (78.52%), Query Frame = 2
Query:   68 VAPIADGDPSPDGILAYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESGGD 514
            +API  GD  PDG +++FD+ DQLQ VSVHSLAAGKKVILFGVPGAF PTCS+ HV GFIEKA+ELKS  VDEI+C+S +DPF++ A +    ENK VKF+ DGS +Y   LGLEL++ +KGLG RSR FALL+D+LKV   NV SGGD
Sbjct:    1 MAPIDVGDFVPDGSISFFDDDDQLQTVSVHSLAAGKKVILFGVPGAFPPTCSMNHVNGFIEKAEELKSNGVDEIICLSGDDPFMITACS----ENKHVKFVEDGSGEYIQLLGLELEVKDKGLGVRSRGFALLLDNLKVIVVNVGSGGD 145          
BLAST of DY257451 vs. ExPASy Swiss-Prot
Match: PR2E1_ORYSJ (Peroxiredoxin-2E-1, chloroplastic OS=Oryza sativa subsp. japonica GN=PRXIIE-1 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.296e-45
Identity = 92/164 (56.10%), Postives = 119/164 (72.56%), Query Frame = 2
Query:   71 APIADGDPSPDGILAYFDEQD-QLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEK--GLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILQAL 553
            A IA GD  PD  L+YFD  D +L+ V+V  L AGKKV+LF VPGAFTPTC+ KHVPGF+ KA EL++K VD + C+SVND FVM+AW ++      V  L+DG+ +   A+G+ELDLS+K  GLG RSRR+ALL +D  VK  N+E GG FT SSA+++L+AL
Sbjct:   69 ATIAVGDKLPDATLSYFDSPDGELKTVTVRDLTAGKKVVLFAVPGAFTPTCTQKHVPGFVAKAGELRAKGVDAVACVSVNDAFVMRAWKESLGVGDEVLLLSDGNGELARAMGVELDLSDKPAGLGVRSRRYALLAEDGVVKVLNLEEGGAFTTSSAEEMLKAL 232          
BLAST of DY257451 vs. ExPASy Swiss-Prot
Match: PR2E2_ORYSJ (Peroxiredoxin-2E-2, chloroplastic OS=Oryza sativa subsp. japonica GN=PRXIIE-2 PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 9.571e-45
Identity = 96/167 (57.49%), Postives = 122/167 (73.05%), Query Frame = 2
Query:   65 LVAPIADGDPSPDGILAYFDEQD-QLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFP-ENKSVKFLADGSAKYTHALGLELDLSEK--GLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILQAL 553
            +VA IA GD  PD  L+YFD  D +L+ V+V  L AG+K +LF VPGAFTPTCS KH+PGFIEKA EL +K VD I C+SVND FVM+AW ++    +  V  L+DG+ + T ALG+E+DLS+K  GLG RSRR+ALL DD  VK  N+E GG FT SSA+++L+AL
Sbjct:   59 VVATIAVGDKLPDATLSYFDPADGELKTVTVAELTAGRKAVLFAVPGAFTPTCSQKHLPGFIEKAGELHAKGVDAIACVSVNDAFVMRAWKESLGLGDADVLLLSDGNLELTRALGVEMDLSDKPMGLGVRSRRYALLADDGVVKVLNLEEGGAFTTSSAEEMLKAL 225          
BLAST of DY257451 vs. ExPASy Swiss-Prot
Match: PRX2E_ARATH (Peroxiredoxin-2E, chloroplastic OS=Arabidopsis thaliana GN=PRXIIE PE=1 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 1.250e-44
Identity = 95/166 (57.23%), Postives = 117/166 (70.48%), Query Frame = 2
Query:   65 LVAPIADGDPSPDGILAYFDEQD-QLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEK--GLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILQAL 553
            + A I+ GD  PD  L+Y D     ++ V+V SL AGKK ILF VPGAFTPTCS KHVPGF+ KA EL+SK +D I CISVND FVM+AW K    N  V  L+DG+ ++T  LG+ELDL +K  GLG RSRR+A+L DD  VK  N+E GG FT SSA+D+L+AL
Sbjct:   69 VTASISVGDKLPDSTLSYLDPSTGDVKTVTVSSLTAGKKTILFAVPGAFTPTCSQKHVPGFVSKAGELRSKGIDVIACISVNDAFVMEAWRKDLGINDEVMLLSDGNGEFTGKLGVELDLRDKPVGLGVRSRRYAILADDGVVKVLNLEEGGAFTNSSAEDMLKAL 234          
BLAST of DY257451 vs. ExPASy Swiss-Prot
Match: MALF3_MALFU (Putative peroxiredoxin (Fragment) OS=Malassezia furfur PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.276e-27
Identity = 66/165 (40.00%), Postives = 93/165 (56.36%), Query Frame = 2
Query:   86 GDPSPDGILAYFDEQDQLQQVSV---------HSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILQAL 553
            G   P+   AY     +L+   V         H    GKKV++  VPGAFTPTC+  HVP ++EK  ELKSK VDE++ IS NDPFV+ AW  T     ++ F  D + +++      LDLS KG+G R+ R+AL+ +DLKV+   ++  G+   SSA  +L  L
Sbjct:    3 GSTIPNATFAYVPYSPELEDHKVCGMPTSFQSHERWKGKKVVIVAVPGAFTPTCTANHVPPYVEKIQELKSKGVDEVVVISANDPFVLSAWGITEHAKDNLTFAQDVNCEFSKHFNATLDLSSKGMGLRTARYALIANDLKVEYFGIDE-GEPKQSSAATVLSKL 166          
BLAST of DY257451 vs. ExPASy Swiss-Prot
Match: PRX2F_ORYSJ (Peroxiredoxin-2F, mitochondrial OS=Oryza sativa subsp. japonica GN=PRXIIF PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.175e-26
Identity = 58/129 (44.96%), Postives = 83/129 (64.34%), Query Frame = 2
Query:  170 GKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDILQAL 553
            GKKV++FG+PGA+T  CS  HVP +    D+LK+K VD ++C+SVNDP+ +  WA+      +++F  D    +  +L LE+DLS   LG RS R++  VDD K+KA NVE +  DF VS A+ IL  +
Sbjct:   70 GKKVVIFGLPGAYTGVCSQAHVPSYKNNIDKLKAKGVDSVICVSVNDPYALNGWAEKLQAKDAIEFYGDFDGSFHKSLDLEVDLSAALLGRRSHRWSAFVDDGKIKAFNVEVAPSDFKVSGAEVILDQI 198          
The following BLAST results are available for this feature:
BLAST of DY257451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
PRX2B_ARATH1.200e-7180.86Peroxiredoxin-2B OS=Arabidopsis thaliana GN=PRXIIB... [more]
PRX2C_ARATH9.505e-6977.16Peroxiredoxin-2C OS=Arabidopsis thaliana GN=PRXIIC... [more]
PRX2D_ARATH1.793e-6775.93Peroxiredoxin-2D OS=Arabidopsis thaliana GN=PRXIID... [more]
PRX2C_ORYSJ7.049e-6472.84Peroxiredoxin-2C OS=Oryza sativa subsp. japonica G... [more]
PRX2A_ARATH9.249e-4865.10Peroxiredoxin-2A OS=Arabidopsis thaliana GN=PRXIIA... [more]
PR2E1_ORYSJ4.296e-4556.10Peroxiredoxin-2E-1, chloroplastic OS=Oryza sativa ... [more]
PR2E2_ORYSJ9.571e-4557.49Peroxiredoxin-2E-2, chloroplastic OS=Oryza sativa ... [more]
PRX2E_ARATH1.250e-4457.23Peroxiredoxin-2E, chloroplastic OS=Arabidopsis tha... [more]
MALF3_MALFU5.276e-2740.00Putative peroxiredoxin (Fragment) OS=Malassezia fu... [more]
PRX2F_ORYSJ1.175e-2644.96Peroxiredoxin-2F, mitochondrial OS=Oryza sativa su... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAK2CD12FM1 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257451 ID=DY257451; Name=DY257451; organism=Citrus sinensis; type=EST; length=731bp
CGCTCTTCTCACCTTTTCGGGGATGACATGGAGATAGACACAGGTGCGGA
TCTAAGACCATCACTTAGTGGCTCCTATCGCAGACGGTGACCCCTCGCCG
GACGGGATTCTCGCTTACTTCGACGAACAAGATCAGTTGCAGCAAGTGTC
CGTACACTCGCTCGCTGCCGGTAAAAAGGTCATCCTCTTTGGCGTCCCCG
GTGCTTTCACTCCTACTTGCAGCTTGAAACATGTGCCTGGATTCATCGAG
AAGGCTGATGAGTTGAAGTCAAAAGACGTCGATGAAATTCTCTGCATAAG
CGTTAATGACCCATTTGTGATGAAGGCATGGGCCAAAACATTTCCTGAGA
ACAAGAGCGTGAAGTTCCTGGCTGATGGCTCAGCAAAATACACCCATGCT
TTGGGGCTTGAGCTTGACCTCAGTGAGAAAGGACTTGGCACCCGGTCAAG
GAGGTTTGCTCTCTTGGTTGATGACCTCAAGGTGAAGGCCGCAAATGTTG
AATCTGGTGGAGATTTCACAGTCTCCAGTGCTGATGACATCCTCCAGGCT
CTTTAAATTTGCAGTTCCATCCCAGCTGCTTAGTGTTGGTTGAGTTATTA
CTTCCTTTTGCTGTGCTATGCTTAGGATGAATATAAACCAGTGGATCTCG
AATATTGGTATGGATGAAGCGAGAAGTCTTTTGTTTAAACTGTTGTTCAT
CCTTATCCGAATAAAGGGGTGTGTTTTTGTG
back to top