EY679968

Overview
NameEY679968
Unique NameEY679968
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length902
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY679968 vs. ExPASy Swiss-Prot
Match: GAT10_ARATH (GATA transcription factor 10 OS=Arabidopsis thaliana GN=GATA10 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.720e-23
Identity = 58/122 (47.54%), Postives = 87/122 (71.31%), Query Frame = 3 
Query:  147 MIGTNFMDEIDCGSFFDHIDDLLDFPNEDVEAGLPNADSNSFPSIWPTQSDSLP-GSDSVF-SNSSTDLSTQLSVPYEDIVQLEWLSNFVEDSFSGGSLTMSKQES-STITKDDSSHNQFQT 503
            MIGT+F +++DCG+FFD++DDL+DFP  D++ G    DS+SFP+IW T  D+ P  SD +F SN+++D S +L VP+EDIV++E   +FVE+     +L   K++S ST T   SSH+QF++
Sbjct:    1 MIGTSFPEDLDCGNFFDNMDDLMDFPGGDIDVGFGIGDSDSFPTIWTTHHDTWPAASDPLFSSNTNSDSSPELYVPFEDIVKVERPPSFVEE-----TLVEKKEDSFSTNTDSSSSHSQFRS 117
The following BLAST results are available for this feature:
BLAST of EY679968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
GAT10_ARATH1.720e-2347.54GATA transcription factor 10 OS=Arabidopsis thalia... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-006-A04-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679968 ID=EY679968; Name=EY679968; organism=Citrus sinensis; type=EST; length=902bp
TTTTACGATTTCATTTTCCGGAATCCGTTTTACGATTTCATTTGATTAAT
TTCTCTTTCTCTGCAGGTTTTCACTTCAAATTCAGCTCTCGCTCTCTTTC
TCTGCCGCCAACTCCACGAGGAAAATTTTAATTATCAAACTCAAACATGA
TTGGAACAAACTTCATGGACGAAATAGACTGCGGCAGCTTCTTTGATCAC
ATAGACGATTTACTCGACTTCCCAAATGAAGATGTCGAAGCCGGGTTACC
CAACGCCGATTCTAACTCGTTCCCCTCCATTTGGCCGACTCAGTCCGACT
CCTTACCCGGGTCCGACTCAGTTTTCTCCAACAGCTCCACTGACCTGTCC
ACCCAGCTCTCTGTTCCATATGAGGACATTGTTCAGCTTGAGTGGCTTTC
GAACTTTGTTGAGGATTCCTTCTCTGGAGGAAGCCTTACTATGAGCAAAC
AAGAGTCATCCACGATCACTAAGGATGATTCATCTCACAACCAGTTTCAG
ACCTCCAGCCCGGTCTCTGTTTTAGAGAGCAGCAGCTCCTGCTCGGGGGA
GAAAACCGTGTTGGGAAGCCCTGAAACTACGGCCCCTGGGAGGGGCGGGC
GGTGCCCGAACAAGCGCCCTCGGCCCCGCAAGGTTAAATCCCCGTCTCCG
GGTTAACTTGTGGTCGCCAAATTCCCTCATGCCTGAAAAAAAAACAGCAG
CCTATCCGTTAATTGCCCCCCAAGGGCCCATCCGAATTCAGAAAAATTTG
GCAAAAATCCGCCCTTGGGATTTAAAAAAACCAAAAAACATCTAACCGAC
GAAGAGAAAAAAAAAAAAAGAAAATACAGATTTGTTCATTTCCAAAAACG
TCTCAAAAAAGAAACCAAGGGAGATTGGGGCACAAAACAAGACGGGATTA
GA
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