FC871246

Overview
NameFC871246
Unique NameFC871246
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1723 contig Csv1_Contig1723:77..947. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC871246 vs. ExPASy Swiss-Prot
Match: AAP6_ARATH (Amino acid permease 6 OS=Arabidopsis thaliana GN=AAP6 PE=1 SV=1)

HSP 1 Score: 377.481 bits (968), Expect = 5.432e-104
Identity = 189/246 (76.83%), Postives = 210/246 (85.37%), Query Frame = 3
Query:  144 QKNSMYIEQNDPE---GDIRKDFLDDDGRAKRTGTWVTASAHIITAVIGSGVLSLAWAIAQLGWVAGPAVLMAFSFITYYTSTLLSDCYRSPDPVTGKRNYTYMDVVRASLGGRSVQLCGLAQYGNLIGVTIGYTITASISMVAVKRSNCFHRHGHHVKCYTSNNPLMIIFACIQIVLSQIPNFHKLSWLSILAAVMSFAYSSIGIGLSIAKVIGDGPHA-XXXXXXXXXXDVSASEKVWRAFQAI 869
            +K SM++EQ+ PE   GD  K+F D+DGR KRTGTW+T SAHIITAVIGSGVLSLAWAIAQLGWVAGPAVLMAFSFITY+TST+L+DCYRSPDPVTGKRNYTYM+VVR+ LGGR VQLCGLAQYGNLIG+TIGYTITASISMVAVKRSNCFH++GH+VKC TSN P MIIFA IQI+LSQIPNFH LSWLSILAAVMSF Y+SIG+GLSIAK  G G H            DVS +EK+WR FQAI
Sbjct:    3 KKKSMFVEQSFPEHEIGDTNKNF-DEDGRDKRTGTWMTGSAHIITAVIGSGVLSLAWAIAQLGWVAGPAVLMAFSFITYFTSTMLADCYRSPDPVTGKRNYTYMEVVRSYLGGRKVQLCGLAQYGNLIGITIGYTITASISMVAVKRSNCFHKNGHNVKCATSNTPFMIIFAIIQIILSQIPNFHNLSWLSILAAVMSFCYASIGVGLSIAKAAGGGEHVRTTLTGVTVGIDVSGAEKIWRTFQAI 247          
BLAST of FC871246 vs. ExPASy Swiss-Prot
Match: AAP1_ARATH (Amino acid permease 1 OS=Arabidopsis thaliana GN=AAP1 PE=1 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 8.419e-89
Identity = 156/222 (70.27%), Postives = 186/222 (83.78%), Query Frame = 3
Query:  204 LDDDGRAKRTGTWVTASAHIITAVIGSGVLSLAWAIAQLGWVAGPAVLMAFSFITYYTSTLLSDCYRSPDPVTGKRNYTYMDVVRASLGGRSVQLCGLAQYGNLIGVTIGYTITASISMVAVKRSNCFHRHGHHVKCYTSNNPLMIIFACIQIVLSQIPNFHKLSWLSILAAVMSFAYSSIGIGLSIAKVIGDGPHAXXXXXXXXXXDVSASEKVWRAFQAI 869
            +D+DGR KRTGTW+TASAHIITAVIGSGVLSLAWAIAQLGW+AG ++L+ FSFITY+TST+L+DCYR+PDPVTGKRNYTYMDVVR+ LGGR VQLCG+AQYGNLIGVT+GYTITASIS+VAV +SNCFH  GH   C  SN P M +F  IQ++LSQIPNFHKLS+LSI+AAVMSF Y++IGIGL+IA V G               DV+A++K+WR+FQA+
Sbjct:   29 VDEDGREKRTGTWLTASAHIITAVIGSGVLSLAWAIAQLGWIAGTSILLIFSFITYFTSTMLADCYRAPDPVTGKRNYTYMDVVRSYLGGRKVQLCGVAQYGNLIGVTVGYTITASISLVAVGKSNCFHDKGHTADCTISNYPYMAVFGIIQVILSQIPNFHKLSFLSIMAAVMSFTYATIGIGLAIATVAGGKVGKTSMTGTAVGVDVTAAQKIWRSFQAV 250          
BLAST of FC871246 vs. ExPASy Swiss-Prot
Match: AAP8_ARATH (Amino acid permease 8 OS=Arabidopsis thaliana GN=AAP8 PE=1 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 4.781e-84
Identity = 156/229 (68.12%), Postives = 180/229 (78.60%), Query Frame = 3
Query:  183 GDIRKDFLDDDGRAKRTGTWVTASAHIITAVIGSGVLSLAWAIAQLGWVAGPAVLMAFSFITYYTSTLLSDCYRSPDPVTGKRNYTYMDVVRASLGGRSVQLCGLAQYGNLIGVTIGYTITASISMVAVKRSNCFHRHGHHVKCYTSNNPLMIIFACIQIVLSQIPNFHKLSWLSILAAVMSFAYSSIGIGLSIAKVIGDGPHAXXXXXXXXXXDVSASEKVWRAFQAI 869
            GD     +DDDGR KRTGT+ TASAHIITAVIGSGVLSLAWAIAQLGWVAG  VL+AF+ ITYYTSTLL+DCYRSPD +TG RNY YM VVR+ LGG+ VQLCG+AQY NL+GVTIGYTITASIS+VA+ +SNC+H  GH  KC  SN P M  F  +QI+LSQ+PNFHKLS+LSI+AAVMSF+Y+SIGIGL+IA V                 DV+ASEKVW+ FQAI
Sbjct:   13 GDAAVKSVDDDGREKRTGTFWTASAHIITAVIGSGVLSLAWAIAQLGWVAGTTVLVAFAIITYYTSTLLADCYRSPDSITGTRNYNYMGVVRSYLGGKKVQLCGVAQYVNLVGVTIGYTITASISLVAIGKSNCYHDKGHKAKCSVSNYPYMAAFGIVQIILSQLPNFHKLSFLSIIAAVMSFSYASIGIGLAIATVASGKIGKTELTGTVIGVDVTASEKVWKLFQAI 241          
BLAST of FC871246 vs. ExPASy Swiss-Prot
Match: AAP4_ARATH (Amino acid permease 4 OS=Arabidopsis thaliana GN=AAP4 PE=1 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 5.858e-74
Identity = 135/221 (61.09%), Postives = 169/221 (76.47%), Query Frame = 3
Query:  207 DDDGRAKRTGTWVTASAHIITAVIGSGVLSLAWAIAQLGWVAGPAVLMAFSFITYYTSTLLSDCYRSPDPVTGKRNYTYMDVVRASLGGRSVQLCGLAQYGNLIGVTIGYTITASISMVAVKRSNCFHRHGHHVKCYTSNNPLMIIFACIQIVLSQIPNFHKLSWLSILAAVMSFAYSSIGIGLSIAKVIGDGPHAXXXXXXXXXXDVSASEKVWRAFQAI 869
            DDDGR KR+GT  TASAHIITAVIGSGVLSLAWAI QLGW+AGP V++ FSF+TYY+STLLSDCYR+ DPV+GKRNYTYMD VR+ LGG   ++CGL QY NL G+T+GYTI ASISM+A+KRSNCFH  G    C+ S+NP MI+F   +I+LSQI +F ++ WLSI+AA+MSF YS+IG+ L I +V  +G              V+ ++K+WR FQA+
Sbjct:   12 DDDGRLKRSGTVWTASAHIITAVIGSGVLSLAWAIGQLGWIAGPTVMLLFSFVTYYSSTLLSDCYRTGDPVSGKRNYTYMDAVRSILGGFRFKICGLIQYLNLFGITVGYTIAASISMMAIKRSNCFHESGGKNPCHMSSNPYMIMFGVTEILLSQIKDFDQIWWLSIVAAIMSFTYSAIGLALGIIQVAANGV-VKGSLTGISIGAVTQTQKIWRTFQAL 231          
BLAST of FC871246 vs. ExPASy Swiss-Prot
Match: AAP2_ARATH (Amino acid permease 2 OS=Arabidopsis thaliana GN=AAP2 PE=1 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 9.992e-74
Identity = 135/221 (61.09%), Postives = 169/221 (76.47%), Query Frame = 3
Query:  207 DDDGRAKRTGTWVTASAHIITAVIGSGVLSLAWAIAQLGWVAGPAVLMAFSFITYYTSTLLSDCYRSPDPVTGKRNYTYMDVVRASLGGRSVQLCGLAQYGNLIGVTIGYTITASISMVAVKRSNCFHRHGHHVKCYTSNNPLMIIFACIQIVLSQIPNFHKLSWLSILAAVMSFAYSSIGIGLSIAKVIGDGPHAXXXXXXXXXXDVSASEKVWRAFQAI 869
            DDDGR KRTGT  TASAHIITAVIGSGVLSLAWAIAQLGW+AGPAV++ FS +T Y+STLLSDCYR+ D V+GKRNYTYMD VR+ LGG   ++CGL QY NL G+ IGYTI ASISM+A+KRSNCFH+ G    C+ S+NP MI+F   +I+LSQ+P+F ++ W+SI+AAVMSF YS+IG+ L I +V  +G              V+ ++K+WR FQA+
Sbjct:   39 DDDGRLKRTGTVWTASAHIITAVIGSGVLSLAWAIAQLGWIAGPAVMLLFSLVTLYSSTLLSDCYRTGDAVSGKRNYTYMDAVRSILGGFKFKICGLIQYLNLFGIAIGYTIAASISMMAIKRSNCFHKSGGKDPCHMSSNPYMIVFGVAEILLSQVPDFDQIWWISIVAAVMSFTYSAIGLALGIVQVAANGVF-KGSLTGISIGTVTQTQKIWRTFQAL 258          
BLAST of FC871246 vs. ExPASy Swiss-Prot
Match: AAP3_ARATH (Amino acid permease 3 OS=Arabidopsis thaliana GN=AAP3 PE=1 SV=2)

HSP 1 Score: 275.789 bits (704), Expect = 2.226e-73
Identity = 134/223 (60.09%), Postives = 171/223 (76.68%), Query Frame = 3
Query:  201 FLDDDGRAKRTGTWVTASAHIITAVIGSGVLSLAWAIAQLGWVAGPAVLMAFSFITYYTSTLLSDCYRSPDPVTGKRNYTYMDVVRASLGGRSVQLCGLAQYGNLIGVTIGYTITASISMVAVKRSNCFHRHGHHVKCYTSNNPLMIIFACIQIVLSQIPNFHKLSWLSILAAVMSFAYSSIGIGLSIAKVIGDGPHAXXXXXXXXXXDVSASEKVWRAFQAI 869
            +LDDDG+ KRTG+  TASAHIITAVIGSGVLSLAWA AQLGW+AGP V++ FS +TY+TS+LL+ CYRS DP++GKRNYTYMD VR++LGG  V LCG+ QY N+ GV IGYTI ++ISM+A+KRSNCFH+ G    C+ ++NP MI F  +QI+ SQIP+F +L WLSILAAVMSF YSS G+ L IA+V+ +G              V+ ++K+WR FQA+
Sbjct:   21 YLDDDGKNKRTGSVWTASAHIITAVIGSGVLSLAWATAQLGWLAGPVVMLLFSAVTYFTSSLLAACYRSGDPISGKRNYTYMDAVRSNLGGVKVTLCGIVQYLNIFGVAIGYTIASAISMMAIKRSNCFHKSGGKDPCHMNSNPYMIAFGLVQILFSQIPDFDQLWWLSILAAVMSFTYSSAGLALGIAQVVVNG-KVKGSLTGISIGAVTETQKIWRTFQAL 242          
BLAST of FC871246 vs. ExPASy Swiss-Prot
Match: AAP5_ARATH (Amino acid permease 5 OS=Arabidopsis thaliana GN=AAP5 PE=1 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 2.547e-69
Identity = 126/229 (55.02%), Postives = 167/229 (72.93%), Query Frame = 3
Query:  198 DFLDDDGRAKRTGTWVTASAHIITAVIGSGVLSLAWAIAQLGWVAGPAVLMAFSFITYYTSTLLSDCYRSPDPVTGKRNYTYMDVVRASLGGRSVQLCGLAQYGNLIGVTIGYTITASISMVAVKRSNCFHRHGHHVKCYTSNNPLMIIFACIQIVLSQIPNFHKLSWLSILAAVMSFAYSSIGIGLSIAKVIGD-----GPHAXXXXXXXXXXDVSASEKVWRAFQAI 869
            D  DDDGR KRTGT  TASAHIITAVIGSGVLSLAWA+AQ+GW+ GP  ++ FSF+T+YTSTLL  CYRS D VTGKRNYTYMD + ++LGG  V++CG+ QY NL G  IGYTI ++IS+VA++R++C   +G +  C+ + N  MI F  +QI+ SQIP+F +L WLSI+AAVMSFAYS+IG+GL ++KV+ +                    V++S+K+WR FQ++
Sbjct:   18 DSFDDDGRPKRTGTVWTASAHIITAVIGSGVLSLAWAVAQIGWIGGPVAMLLFSFVTFYTSTLLCSCYRSGDSVTGKRNYTYMDAIHSNLGGIKVKVCGVVQYVNLFGTAIGYTIASAISLVAIQRTSCQQMNGPNDPCHVNGNVYMIAFGIVQIIFSQIPDFDQLWWLSIVAAVMSFAYSAIGLGLGVSKVVENKEIKGSLTGVTVGTVTLSGTVTSSQKIWRTFQSL 246          
BLAST of FC871246 vs. ExPASy Swiss-Prot
Match: AAP7_ARATH (Probable amino acid permease 7 OS=Arabidopsis thaliana GN=AAP7 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 9.100e-51
Identity = 106/222 (47.75%), Postives = 141/222 (63.51%), Query Frame = 3
Query:  213 DGRAKRTGTWVTASAHIITAVIGSGVLSLAWAIAQLGWVAGPAVLMAFSFITYYTSTLLSDCYRSPDPVTGK-RNYTYMDVVRASLGGRSVQLCGLAQYGNLIGVTIGYTITASISMVAVKRSNCFHRHGHHVKCY--TSNNPLMIIFACIQIVLSQIPNFHKLSWLSILAAVMSFAYSSIGIGLSIAKVIGDGPHAXXXXXXXXXXDVSASEKVWRAFQAI 869
            D    RTGT  TA AHIIT VIG+GVLSLAWA A+LGW+AGPA L+AF+ +T  ++ LLSDCYR PDP  G  R  +Y   V+  LG ++  +CG+  Y +L G  I YTI  +    A+ +SNC+HR+GH+  C    +NN  M++F   QI +SQIPNFH + WLS++AA+MSF YS IGIGL++ K+I    +             +  EKVW  FQA+
Sbjct:   21 DSVTARTGTLWTAVAHIITGVIGAGVLSLAWATAELGWIAGPAALIAFAGVTLLSAFLLSDCYRFPDPNNGPLRLNSYSQAVKLYLGKKNEIVCGVVVYISLFGCGIAYTIVIATCSRAIMKSNCYHRNGHNATCSYGDNNNYFMVLFGLTQIFMSQIPNFHNMVWLSLVAAIMSFTYSFIGIGLALGKII---ENRKIEGSIRGIPAENRGEKVWIVFQAL 239          
BLAST of FC871246 vs. ExPASy Swiss-Prot
Match: LHTL2_ARATH (Lysine histidine transporter-like 2 OS=Arabidopsis thaliana GN=At1g67640 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.118e-15
Identity = 58/188 (30.85%), Postives = 97/188 (51.60%), Query Frame = 3
Query:  222 AKRTGTWVTASAHIITAVIGSGVLSLAWAIAQLGWVAGPAVLMAFSFITYYTSTLLSDCYRSPDPVTGKRNYTYMDVVRASLGGR-SVQLCGLAQYGNLIGVTIGYTITASISMVAVKRSNCFHRHGHHVKCYTSNN----PLMIIFACIQIVLSQIPNFHKLSWLSILAAVMSFAYSSIGIGLSIAK 770
            + R   W  ++ H +TA++G+GVLSL +A++ LGW  G  +++    IT+YT   L    +  + V GKR   Y ++ + + G +  + +    Q    +GV I Y +T   S+  +          H + C    N      ++IFA I  VL+ +PNF+ +S +S+ AAVMS +YS+I    S+ K
Sbjct:   27 SSRNAKWWYSAFHNVTAMVGAGVLSLPYAMSNLGWGPGVTIMIMSWLITFYT---LWQMVQMHEMVPGKRFDRYHELGQHAFGEKLGLWIVVPQQLIVEVGVDIVYMVTGGKSLKKI----------HDLLCTDCKNIRTTYWIMIFASIHFVLAHLPNFNSISIVSLAAAVMSLSYSTIAWATSVKK 201          
BLAST of FC871246 vs. ExPASy Swiss-Prot
Match: LHTL1_ARATH (Lysine histidine transporter-like 1 OS=Arabidopsis thaliana GN=At1g48640 PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.766e-15
Identity = 60/188 (31.91%), Postives = 98/188 (52.13%), Query Frame = 3
Query:  222 AKRTGTWVTASAHIITAVIGSGVLSLAWAIAQLGWVAGPAVLMAFSFITYYTSTLLSDCYRSPDPVTGKRNYTYMDVVRASLGGR-SVQLCGLAQYGNLIGVTIGYTITASISMVAVKRSNCFHRHGHHVKCYTSN----NPLMIIFACIQIVLSQIPNFHKLSWLSILAAVMSFAYSSIGIGLSIAK 770
            + R   W  ++ H +TA++G+GVL L + +AQLGW  G AVL+    IT YT   + + +   + V GKR   Y ++ + + G R  + +    Q    +GV I Y +T   S+          +  H + C   +    +  ++IFA    VLS +PNF+ +S +S++AAVMS +YS+I    + AK
Sbjct:   39 SSRNAKWWYSTFHNVTAMVGAGVLGLPFFMAQLGWGPGIAVLILSWIITLYTLWQMVEMH---EMVPGKRFDRYHELGQFAFGERLGLYIIVPQQIIVEVGVCIVYMVTGGQSL----------KKFHEIACQDCSPIRLSFFIMIFASSHFVLSHLPNFNSISGVSLVAAVMSLSYSTIAWTATAAK 213          
The following BLAST results are available for this feature:
BLAST of FC871246 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
AAP6_ARATH5.432e-10476.83Amino acid permease 6 OS=Arabidopsis thaliana GN=A... [more]
AAP1_ARATH8.419e-8970.27Amino acid permease 1 OS=Arabidopsis thaliana GN=A... [more]
AAP8_ARATH4.781e-8468.12Amino acid permease 8 OS=Arabidopsis thaliana GN=A... [more]
AAP4_ARATH5.858e-7461.09Amino acid permease 4 OS=Arabidopsis thaliana GN=A... [more]
AAP2_ARATH9.992e-7461.09Amino acid permease 2 OS=Arabidopsis thaliana GN=A... [more]
AAP3_ARATH2.226e-7360.09Amino acid permease 3 OS=Arabidopsis thaliana GN=A... [more]
AAP5_ARATH2.547e-6955.02Amino acid permease 5 OS=Arabidopsis thaliana GN=A... [more]
AAP7_ARATH9.100e-5147.75Probable amino acid permease 7 OS=Arabidopsis thal... [more]
LHTL2_ARATH2.118e-1530.85Lysine histidine transporter-like 2 OS=Arabidopsis... [more]
LHTL1_ARATH2.766e-1531.91Lysine histidine transporter-like 1 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3DF01FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK3DF01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871246 ID=FC871246; Name=FC871246; organism=Citrus sinensis; type=EST; length=871bp
CAACACTGCCCCACTGACCTTGCAGCATAAGCTGCTGCTACTGCTACTCA
TTTTTAATTAATCATATCTCCTAATTTCTCAACTTCTCAGCAACCCCATT
TCAGCTTCTTCTACTACTCAACAGAGACATGGCGATGGAGATGCAAAAGA
ACAGCATGTATATCGAACAAAATGACCCTGAAGGTGATATCCGCAAAGAC
TTTCTGGATGATGATGGTCGAGCAAAAAGAACTGGGACTTGGGTGACTGC
AAGTGCTCATATTATCACGGCAGTGATTGGCTCTGGAGTACTGTCTCTGG
CATGGGCCATTGCTCAGCTTGGCTGGGTAGCTGGCCCAGCTGTTCTCATG
GCTTTCTCATTCATCACCTATTACACCTCTACTTTGCTTTCCGATTGTTA
CCGGTCTCCTGATCCCGTCACCGGCAAGCGAAACTACACCTACATGGATG
TAGTCAGAGCTAGCCTAGGAGGAAGGAGCGTCCAGCTATGTGGATTGGCT
CAGTATGGAAATCTCATTGGAGTTACGATTGGTTATACTATCACTGCATC
TATTAGCATGGTGGCTGTTAAAAGGTCAAATTGCTTCCACAGACATGGTC
ATCATGTCAAGTGCTACACATCAAACAATCCACTCATGATCATCTTTGCC
TGCATCCAGATTGTTCTTAGCCAAATACCAAACTTTCATAAGCTCTCCTG
GCTCTCAATTCTCGCTGCCGTAATGTCTTTTGCTTATTCCTCCATTGGAA
TTGGCCTCTCCATAGCCAAAGTCATAGGTGATGGGCCGCATGCAACAACC
TTAACGGGGACAACAGTAGGAGTAGACGTGTCAGCATCAGAGAAAGTTTG
GAGAGCATTTCAGGCAATTGG
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