FC871245

Overview
NameFC871245
Unique NameFC871245
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length506
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13486 contig Csv1_Contig13486:1..506. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of FC871245 vs. ExPASy Swiss-Prot
Match: MGAT1_ARATH (Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase OS=Arabidopsis thaliana GN=GNTI PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.083e-17
Identity = 40/52 (76.92%), Postives = 46/52 (88.46%), Query Frame = 2 
Query:    5 FEIIARQFGIFNEWKDGIPRTAYKGVVVFRYQTPRRIFLVGPDSLRQLGIKD 160
            FE IA +FGIF EWKDG+PRTAYKGVVVFR QT RR+FLVGPDS+ QLGI++
Sbjct:  392 FERIAGEFGIFEEWKDGVPRTAYKGVVVFRIQTTRRVFLVGPDSVMQLGIRN 443
The following BLAST results are available for this feature:
BLAST of FC871245 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MGAT1_ARATH3.083e-1776.92Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglu... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAK2AH12FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK2AH12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871245 ID=FC871245; Name=FC871245; organism=Citrus sinensis; type=EST; length=506bp
GCACTTTGAAATCATCGCACGTCAATTCGGAATTTTTAACGAATGGAAGG
ATGGTATACCAAGGACAGCATACAAAGGAGTAGTTGTTTTCCGTTACCAA
ACACCTCGGCGTATATTTCTTGTTGGTCCTGATTCTCTGAGGCAGCTTGG
GATCAAAGATCGTTGATATAGAAAAGTAACAATAAGAGAATAGGACGAGA
AAATACATTCTTGCTAATCAGTGAGGTTCTGGCCAAAGAATTGTTTACTG
AAGCTGGAGGGCATGCTAACATGTCAAACAAATACAATTAAGCGAAAGGA
GCTGGCGCGCTAGTTGCGGTCCAAATTTTCTGTCCACTATATGAACTTTT
ACCTTGTAGAGTAGAAGATACCATACTTTCTTGCTGTCGAAGTCGGCAAT
ATTGCCCATGCAAGCCAGTAAGCAGGTGATAATGCAAATGCGACAGAAGA
AACCATGAAGTTTTAATCTGATTCTTTTTGTTTTGATTAAAAAAAAAAAA
AAAAAA
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