DT214547

Overview
NameDT214547
Unique NameDT214547
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3537 contig Csv1_Contig3537:289..1101. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: GLO2O_ARATH (Hydroxyacylglutathione hydrolase 3, mitochondrial OS=Arabidopsis thaliana GN=GLY3 PE=1 SV=2)

HSP 1 Score: 341.658 bits (875), Expect = 2.972e-93
Identity = 164/207 (79.23%), Postives = 184/207 (88.89%), Query Frame = -3
Query:  191 KTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDYKGFTVSTVGEEIQYNPRLTKDEETFKSIMENLNLSYPKMIDIAVPANLVCGMQDLASKA 811
            KTVDRDL +I ELGLKL+YAMNTHVHADHVTGTGL+K+K+PGV           ADL +E GDKVS GD++LEVRATPGHT GCVTYV+GEG DQPQPRMAFTGDA+LIRGCGRTDFQ GSS QLY+SVHSQIFTLPKDTLIYPAHDYKGF VSTVGEE+Q+NPRLTKD+ETFK+IM NLNLSYPKMID+AVPAN+VCG+QD+ S+A
Sbjct:   49 KTVDRDLKLIDELGLKLIYAMNTHVHADHVTGTGLLKTKLPGVKSVISKASGSKADLFLEPGDKVSIGDIYLEVRATPGHTAGCVTYVTGEGADQPQPRMAFTGDAVLIRGCGRTDFQEGSSDQLYESVHSQIFTLPKDTLIYPAHDYKGFEVSTVGEEMQHNPRLTKDKETFKTIMSNLNLSYPKMIDVAVPANMVCGLQDVPSQA 255          
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: ETHE1_HUMAN (Protein ETHE1, mitochondrial OS=Homo sapiens GN=ETHE1 PE=1 SV=2)

HSP 1 Score: 234.958 bits (598), Expect = 3.918e-61
Identity = 120/201 (59.70%), Postives = 140/201 (69.65%), Query Frame = -3
Query:  209 KTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDYKGFTVSTVGEEIQYNPRLTKDEETFKSIMENLNLSYPKMIDIAVPANLVCGMQ 811
            +T  RD  +IKELGL+L+YA+NTH HADH+TG+GL++S +PG            ADLH+E GD + FG   LE RA+PGHT GCVT+V  +        MAFTGDALLIRGCGRTDFQ G +  LY SVH +IFTLP D LIYPAHDY GFTVSTV EE   NPRLT   E F  IM NLNL  P+ ID AVPAN+ CG+Q
Sbjct:   56 ETAPRDAQLIKELGLRLLYAVNTHCHADHITGSGLLRSLLPGCQSVISRLSGAQADLHIEDGDSIRFGRFALETRASPGHTPGCVTFVLNDHS------MAFTGDALLIRGCGRTDFQQGCAKTLYHSVHEKIFTLPGDCLIYPAHDYHGFTVSTVEEERTLNPRLTLSCEEFVKIMGNLNLPKPQQIDFAVPANMRCGVQ 250          
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: ETHE1_MOUSE (Protein ETHE1, mitochondrial OS=Mus musculus GN=Ethe1 PE=1 SV=2)

HSP 1 Score: 232.646 bits (592), Expect = 1.944e-60
Identity = 118/201 (58.71%), Postives = 140/201 (69.65%), Query Frame = -3
Query:  209 KTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDYKGFTVSTVGEEIQYNPRLTKDEETFKSIMENLNLSYPKMIDIAVPANLVCGMQ 811
            +T  RD  +IKELGLKL+YA+NTH HADH+TGTG+++S +PG            ADLH+  GD + FG   LE RA+PGHT GCVT+V  +        MAFTGDALLIRGCGRTDFQ G +  LY SVH +IFTLP + LIYPAHDY G TVSTV EE   NPRLT   E F  +M+NLNL  P+ IDIAVPAN+ CG+Q
Sbjct:   56 ETAHRDAQLIKELGLKLLYAVNTHCHADHITGTGVLRSLLPGCQSVISRLSGAQADLHIGEGDSIRFGRFALETRASPGHTPGCVTFVLND------QSMAFTGDALLIRGCGRTDFQQGCAKTLYHSVHEKIFTLPGNCLIYPAHDYHGLTVSTVEEERTLNPRLTLSCEEFIKVMDNLNLPKPQQIDIAVPANMRCGVQ 250          
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: ETHE1_BOVIN (Protein ETHE1, mitochondrial OS=Bos taurus GN=ETHE1 PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 6.255e-59
Identity = 114/201 (56.72%), Postives = 138/201 (68.66%), Query Frame = -3
Query:  209 KTVDRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDYKGFTVSTVGEEIQYNPRLTKDEETFKSIMENLNLSYPKMIDIAVPANLVCGMQ 811
            +T  RD  ++KELGL+L+YA+NTH HADH+TG+GL++S +PG            AD H+E GD + FG   LE RA+PGHT GCVT+V  +        MAFTGDALLIRGCGRTDFQ G +  LY SVH +IFTLP + LIYPAHDY G TVSTV EE   NPRLT   E F  +M+ LNL  P+ ID AVPAN+ CG+Q
Sbjct:   56 ETAQRDAQLVKELGLRLLYAVNTHCHADHITGSGLLRSLLPGCQSVISRLSGAQADWHIEDGDSIQFGRFALETRASPGHTPGCVTFVLNDHS------MAFTGDALLIRGCGRTDFQQGCAETLYHSVHEKIFTLPGNCLIYPAHDYHGLTVSTVEEERTLNPRLTLSCEEFVKVMDKLNLPKPQQIDFAVPANMRCGIQ 250          
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: BLH_AGRT5 (Beta-lactamase hydrolase-like protein OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=blh PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.559e-17
Identity = 74/221 (33.48%), Postives = 99/221 (44.80%), Query Frame = -3
Query:  224 DRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIK----------SKVPGVXXXXXXXXXXXA--------DLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLI--RGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDYK-----GFTVSTVGEEIQYNPRLT-KDEETFKSIME--NLNLSYPKMIDIAVPANL 802
            D  L+ +K  GL + + ++TH HADH +    +K          +KV GV                    D   E GD+ S G L   V  +PGHTL  VTYV G          AF  D L +   G  R DF GGS+ QL+ S+   I  LP DT ++  HDY+         STVGE+ + NP L    EE F  + E  +  L  PK+I  A+  N+
Sbjct:  192 DAILDYVKRHGLSVEWILDTHPHADHFSAADYLKQKTGAKTAIGAKVTGVQKLWQEKYNWSDFKTDGSQWDQLFEAGDRFSIGSLEARVLFSPGHTLASVTYVVGNA--------AFVHDTLFMPDSGTARADFPGGSAKQLWASI-QDILALPDDTRLFTGHDYQPGGRAPKWESTVGEQTRSNPHLAGMTEEDFVRLREARDRTLPMPKLILHALQVNI 403          
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: GLO2_BOVIN (Hydroxyacylglutathione hydrolase, mitochondrial OS=Bos taurus GN=HAGH PE=2 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 2.751e-14
Identity = 43/135 (31.85%), Postives = 66/135 (48.89%), Query Frame = -3
Query:  368 GLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 772
            G+KL   + TH H DH  G   +    PG+               V H   +  G L ++  +TP HT G + Y   + P+ P+P   FTGD L + GCG+  F  G++ ++YK++   +  LP DT +Y  H+Y
Sbjct:   92 GVKLTTVLTTHHHWDHAGGNEKLVKLEPGLKVYGGDDRIGALTHKVTHLSTLQVGSLHVKCLSTPCHTSGHICYFVTK-PNSPEPPAVFTGDTLFVAGCGK--FYEGTADEMYKALLEVLGRLPADTRVYCGHEY 223          
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: HAGHL_HUMAN (Hydroxyacylglutathione hydrolase-like protein OS=Homo sapiens GN=HAGHL PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.693e-14
Identity = 45/144 (31.25%), Postives = 73/144 (50.69%), Query Frame = -3
Query:  368 RDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 799
            R L ++   G+ L   + TH H DH  G   +    PG+               + HG+++ FG + +    TPGHT G ++Y   E  D P P   F+GDAL + GCG      GS+ Q+Y+S+ +++ TLP +T ++  H++
Sbjct:   35 RLLEIVGREGVSLTAVLTTHHHWDHARGNPELARLRPGLAVLGADERIFSLTRRLAHGEELRFGAIHVRCLLTPGHTAGHMSYFLWE-DDCPDPPALFSGDALSVAGCG--SCLEGSAQQMYQSL-AELGTLPPETKVFCGHEH 174          
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: HAGHL_MOUSE (Hydroxyacylglutathione hydrolase-like protein OS=Mus musculus GN=Haghl PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.129e-14
Identity = 53/204 (25.98%), Postives = 87/204 (42.65%), Query Frame = -3
Query:  287 DRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDYKGFTV--------------------------------STVGEEIQYNPRLTKDEETFKS 802
            +R L +    G+ L   ++TH H DH  G   +   +PG+               +EHG+ + FG + +    TPGHT G ++Y   E  D P     F+GDAL + GCG       ++ Q+Y+S+   + TLP +T ++  H++    +                                ST+GEE+ YNP L   E+  ++
Sbjct:   34 ERLLEIAGREGVSLTMVLSTHHHWDHTRGNAELAHILPGLAVLGADERICALTRRLEHGEGLQFGAIHVRCLLTPGHTSGHMSYFLWE-DDCPDSPALFSGDALSVAGCGW--HLEDTAQQMYQSLAKTLGTLPPETKVFCGHEHTLSNLEFAQKVEPCNEHVQAKLSWAQERDDEDIPTVPSTLGEELMYNPFLRVTEDAVRA 234          
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: BLH_XYLFA (Beta-lactamase hydrolase-like protein OS=Xylella fastidiosa GN=blh PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.365e-13
Identity = 65/224 (29.02%), Postives = 99/224 (44.20%), Query Frame = -3
Query:  215 DRDLNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPG------------------VXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLI--RGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDYKGF-----TVSTVGEEIQYNPRLT-KDEETFKSIME--NLNLSYPKMIDIAVPANLVCG 802
            D  L  +++ GL + + ++TH HADH +    +K +                                  D     GD  + G +   V  +PGHTL  VTYV G+         AF  D + +   G  R DF GGS+  L+ S+ + I +LP +T ++  HDY+         STVGE+ + NP L   DE TF ++ E  +  L  PK+I  A+  N++ G
Sbjct:  192 DAILAHVEQQGLTVEWILDTHPHADHFSAAQYLKQRTGAPTAIGTHVTEVQRLWREIYNWPTLSANGSQWDHLFADGDVFNVGSIKGRVMFSPGHTLASVTYVIGD--------TAFVHDTIFMPDAGTARADFPGGSARALWSSIQT-ILSLPDETRLFTGHDYQPSGRHPRWESTVGEQKKANPHLAGVDETTFVALREARDKTLPMPKLILHALQVNVLGG 406          
BLAST of DT214547 vs. ExPASy Swiss-Prot
Match: GLO2_MOUSE (Hydroxyacylglutathione hydrolase, mitochondrial OS=Mus musculus GN=Hagh PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 6.776e-13
Identity = 42/142 (29.58%), Postives = 66/142 (46.48%), Query Frame = -3
Query:  368 LNVIKELGLKLVYAMNTHVHADHVTGTGLIKSKVPGVXXXXXXXXXXXADLHVEHGDKVSFGDLFLEVRATPGHTLGCVTYVSGEGPDQPQPRMAFTGDALLIRGCGRTDFQGGSSSQLYKSVHSQIFTLPKDTLIYPAHDY 793
            +   K+  +KL   + TH H DH  G   +    PG+               V H   +  G L ++  +TP HT G + Y   + P   +P   FTGD L + GCG+  F  G++ ++YK++   +  LP DT +Y  H+Y
Sbjct:   86 IEAAKKHHVKLTTVLTTHHHWDHAGGNEKLVKLEPGLKVYGGDDRIGALTHKVTHLSTLQVGSLSVKCLSTPCHTSGHICYFVSK-PGSSEPSAVFTGDTLFVAGCGK--FYEGTADEMYKALLEVLGRLPPDTKVYCGHEY 224          
The following BLAST results are available for this feature:
BLAST of DT214547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
GLO2O_ARATH2.972e-9379.23Hydroxyacylglutathione hydrolase 3, mitochondrial ... [more]
ETHE1_HUMAN3.918e-6159.70Protein ETHE1, mitochondrial OS=Homo sapiens GN=ET... [more]
ETHE1_MOUSE1.944e-6058.71Protein ETHE1, mitochondrial OS=Mus musculus GN=Et... [more]
ETHE1_BOVIN6.255e-5956.72Protein ETHE1, mitochondrial OS=Bos taurus GN=ETHE... [more]
BLH_AGRT51.559e-1733.48Beta-lactamase hydrolase-like protein OS=Agrobacte... [more]
GLO2_BOVIN2.751e-1431.85Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
HAGHL_HUMAN4.693e-1431.25Hydroxyacylglutathione hydrolase-like protein OS=H... [more]
HAGHL_MOUSE6.129e-1425.98Hydroxyacylglutathione hydrolase-like protein OS=M... [more]
BLH_XYLFA1.365e-1329.02Beta-lactamase hydrolase-like protein OS=Xylella f... [more]
GLO2_MOUSE6.776e-1329.58Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_45H11_b2 Ruby Orange Developing Seed cDNA Library UCRCS09-2 Citrus sinensis cDNA clone UCRCS09-45H11-O22-1-7.d-polyt, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214547 ID=DT214547; Name=DT214547; organism=Citrus sinensis; type=EST; length=813bp
AGATATTCACTTATATCTTATTTTCATCATTTCACTGATCCATACATTCT
TTAGGGGCTTAACAACTTTTTCTTTGTTATTGTTTTGTACTATACCAATT
AAGAGNCATTATATATNATTTGTACAGAGTAACTTGAACAGCAGGTACCG
AGGTTATCACCATTTGGGCATCGCCCAAGGAAGCTCATCAGGCTTTGGAG
GCCAGATCTTGCATTCCACAAACCAAATTTGCCGGAACTGCTATGTCTAT
CATCTTTGGATATGACAGGTTTAAATTTTCCATTATGGATTTGAATGTTT
CCTCATCTTTCGTTAGGCGAGGATTGTACTGAATCTCCTCTCCCACTGTG
CTTACTGTGAATCCCTTGTAATCATGAGCCGGGTAGATTAATGTGTCCTT
CGGCAAAGTAAATATCTGTGAATGCACTGACTTGTAGAGCTGACTTGAAC
TTCCTCCCTGAAAATCAGTCCTCCCGCATCCACGTATCAGTAAGGCATCT
CCAGTGAATGCCATCCTTGGTTGAGGCTGATCAGGTCCTTCACCAGAAAC
ATAGGTAACACAACCCAACGTATGGCCAGGAGTAGCACGAACCTCAAGGA
AGAGATCACCGAAAGAGACTTTATCCCCATGTTCAACATGAAGATCAGCC
TTGGAACCACTTGCTTTTGATATAATAGATTTCACTCCCGGAACCTTACT
CTTAATCAGACCCGTTCCAGTGACATGATCAGCATGTACATGGGTGTTCA
TGGCATATACAAGCTTCAATCCCAGTTCTTTAATAACATTCAGGTCTCTA
TCAACGGTCTTGT
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