FC871227

Overview
NameFC871227
Unique NameFC871227
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length448
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6900 contig Csv1_Contig6900:1..448. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC871227 vs. ExPASy Swiss-Prot
Match: PHT14_ARATH (Inorganic phosphate transporter 1-4 OS=Arabidopsis thaliana GN=PHT1-4 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.328e-13
Identity = 41/81 (50.62%), Postives = 46/81 (56.79%), Query Frame = 2
Query:    2 EIFPARLRSTCHXXXXXXXXXXXXXXXFGFLYLADTS-------------GVKKALLILGGANFLGMLFTFLVPESKGKSL 205
            EIFPAR RSTCH               FGFLYLA                GV+ +L++LG  NFLG+LFTFLVPESKGKSL
Sbjct:  431 EIFPARFRSTCHGISAASGKLGAMVGAFGFLYLAQNPDKDKTDAGYPPGIGVRNSLIVLGVVNFLGILFTFLVPESKGKSL 511          
BLAST of FC871227 vs. ExPASy Swiss-Prot
Match: PHT12_ARATH (Probable inorganic phosphate transporter 1-2 OS=Arabidopsis thaliana GN=PHT1-2 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 4.347e-13
Identity = 41/81 (50.62%), Postives = 45/81 (55.56%), Query Frame = 2
Query:    2 EIFPARLRSTCHXXXXXXXXXXXXXXXFGFLYLADTS-------------GVKKALLILGGANFLGMLFTFLVPESKGKSL 205
            EIFPARLRSTCH               FGFLY A                GVK +L++LG  NF+GMLFTFLVPE KGKSL
Sbjct:  430 EIFPARLRSTCHGISAAAGKAGAIIGAFGFLYAAQNQDKAKVDAGYPPGIGVKNSLIVLGVLNFIGMLFTFLVPEPKGKSL 510          
BLAST of FC871227 vs. ExPASy Swiss-Prot
Match: PHT11_ARATH (Inorganic phosphate transporter 1-1 OS=Arabidopsis thaliana GN=PHT1-1 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 5.677e-13
Identity = 41/81 (50.62%), Postives = 46/81 (56.79%), Query Frame = 2
Query:    2 EIFPARLRSTCHXXXXXXXXXXXXXXXFGFLYLADTS-------------GVKKALLILGGANFLGMLFTFLVPESKGKSL 205
            EIFPARLRSTCH               FGFLY A +              GVK +L++LG  NF+GMLFTFLVPE KGKSL
Sbjct:  430 EIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSQDKAKVDAGYPPGIGVKNSLIMLGVLNFIGMLFTFLVPEPKGKSL 510          
BLAST of FC871227 vs. ExPASy Swiss-Prot
Match: PHT13_ARATH (Probable inorganic phosphate transporter 1-3 OS=Arabidopsis thaliana GN=PHT1-3 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.265e-12
Identity = 41/81 (50.62%), Postives = 45/81 (55.56%), Query Frame = 2
Query:    2 EIFPARLRSTCHXXXXXXXXXXXXXXXFGFLYLADTS-------------GVKKALLILGGANFLGMLFTFLVPESKGKSL 205
            EIFPARLRSTCH               FGFLY A                GVK +L++LG  NF+GMLFTFLVPE KGKSL
Sbjct:  430 EIFPARLRSTCHGISAATGKAGAIVGAFGFLYAAQPQDKTKTDAGYPPGIGVKNSLIMLGVINFVGMLFTFLVPEPKGKSL 510          
BLAST of FC871227 vs. ExPASy Swiss-Prot
Match: PHT17_ARATH (Probable inorganic phosphate transporter 1-7 OS=Arabidopsis thaliana GN=PHT1-7 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 2.157e-12
Identity = 40/81 (49.38%), Postives = 45/81 (55.56%), Query Frame = 2
Query:    2 EIFPARLRSTCHXXXXXXXXXXXXXXXFGFLYLADTS-------------GVKKALLILGGANFLGMLFTFLVPESKGKSL 205
            EIFPAR RSTCH               FGFLYLA +              GVK +L++LG  N LGM+FT LVPESKGKSL
Sbjct:  427 EIFPARFRSTCHGISAASGKLGAMVGAFGFLYLAQSPDKTKTEHGYPPGIGVKNSLIVLGVVNLLGMVFTLLVPESKGKSL 507          
BLAST of FC871227 vs. ExPASy Swiss-Prot
Match: PHT16_ORYSJ (Inorganic phosphate transporter 1-6 OS=Oryza sativa subsp. japonica GN=PHT1-6 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.680e-12
Identity = 39/81 (48.15%), Postives = 45/81 (55.56%), Query Frame = 2
Query:    2 EIFPARLRSTCHXXXXXXXXXXXXXXXFGFLYLADTS-------------GVKKALLILGGANFLGMLFTFLVPESKGKSL 205
            EIFPARLR+TCH               FGFLYLA +              GV+ +L +L   N LG+LFTFLVPESKGKSL
Sbjct:  433 EIFPARLRATCHGISAASGKLGAIVGSFGFLYLAQSPDRSKTEHGYPPGIGVRNSLFLLAACNLLGLLFTFLVPESKGKSL 513          
BLAST of FC871227 vs. ExPASy Swiss-Prot
Match: PHT15_ORYSJ (Probable inorganic phosphate transporter 1-5 OS=Oryza sativa subsp. japonica GN=PHT1-5 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.680e-12
Identity = 39/81 (48.15%), Postives = 45/81 (55.56%), Query Frame = 2
Query:    2 EIFPARLRSTCHXXXXXXXXXXXXXXXFGFLYLADTS-------------GVKKALLILGGANFLGMLFTFLVPESKGKSL 205
            EIFPARLRSTCH               FGFLY A ++             GV+ +L +L G N +G LFTFLVPESKGKSL
Sbjct:  437 EIFPARLRSTCHGISSAAGKMGAIVGSFGFLYAAQSTDPSKTDAGYPRGIGVRNSLFLLAGCNVVGFLFTFLVPESKGKSL 517          
BLAST of FC871227 vs. ExPASy Swiss-Prot
Match: PHT15_ARATH (Probable inorganic phosphate transporter 1-5 OS=Arabidopsis thaliana GN=PHT1-5 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 4.806e-12
Identity = 40/81 (49.38%), Postives = 46/81 (56.79%), Query Frame = 2
Query:    2 EIFPARLRSTCHXXXXXXXXXXXXXXXFGFLYLADTS-------------GVKKALLILGGANFLGMLFTFLVPESKGKSL 205
            EIFPARLRSTCH               FGFLY A +S             GV+ +LL+L   NFLG++FT LVPESKGKSL
Sbjct:  432 EIFPARLRSTCHGISAASGKAGAIVGAFGFLYAAQSSDSEKTDAGYPPGIGVRNSLLMLACVNFLGIVFTLLVPESKGKSL 512          
BLAST of FC871227 vs. ExPASy Swiss-Prot
Match: PHT12_ORYSJ (Inorganic phosphate transporter 1-2 OS=Oryza sativa subsp. japonica GN=PTH1-2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 6.277e-12
Identity = 39/79 (49.37%), Postives = 42/79 (53.16%), Query Frame = 2
Query:    2 EIFPARLRSTCHXXXXXXXXXXXXXXXFGFLYLADTS-----------GVKKALLILGGANFLGMLFTFLVPESKGKSL 205
            EIFPARLRSTCH               FGFLY A              G++ AL +L G NFLGML T LVPESKG SL
Sbjct:  430 EIFPARLRSTCHGISAASGKAGAIIGAFGFLYAAQDQHNPDAGYSRGIGIRNALFVLAGTNFLGMLMTLLVPESKGLSL 508          
BLAST of FC871227 vs. ExPASy Swiss-Prot
Match: PHT14_ORYSJ (Probable inorganic phosphate transporter 1-4 OS=Oryza sativa subsp. japonica GN=PHT1-4 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.398e-11
Identity = 38/81 (46.91%), Postives = 43/81 (53.09%), Query Frame = 2
Query:    2 EIFPARLRSTCHXXXXXXXXXXXXXXXFGFLYLADTS-------------GVKKALLILGGANFLGMLFTFLVPESKGKSL 205
            EIFPARLRSTCH               FGFLY A ++             GV+ +L  L G N +G  FTFLVPESKGKSL
Sbjct:  428 EIFPARLRSTCHGISAAAGKAGAIVGSFGFLYAAQSTDASKTDAGYPPGIGVRNSLFFLAGCNVIGFFFTFLVPESKGKSL 508          
The following BLAST results are available for this feature:
BLAST of FC871227 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
PHT14_ARATH3.328e-1350.62Inorganic phosphate transporter 1-4 OS=Arabidopsis... [more]
PHT12_ARATH4.347e-1350.62Probable inorganic phosphate transporter 1-2 OS=Ar... [more]
PHT11_ARATH5.677e-1350.62Inorganic phosphate transporter 1-1 OS=Arabidopsis... [more]
PHT13_ARATH1.265e-1250.62Probable inorganic phosphate transporter 1-3 OS=Ar... [more]
PHT17_ARATH2.157e-1249.38Probable inorganic phosphate transporter 1-7 OS=Ar... [more]
PHT16_ORYSJ3.680e-1248.15Inorganic phosphate transporter 1-6 OS=Oryza sativ... [more]
PHT15_ORYSJ3.680e-1248.15Probable inorganic phosphate transporter 1-5 OS=Or... [more]
PHT15_ARATH4.806e-1249.38Probable inorganic phosphate transporter 1-5 OS=Ar... [more]
PHT12_ORYSJ6.277e-1249.37Inorganic phosphate transporter 1-2 OS=Oryza sativ... [more]
PHT14_ORYSJ1.398e-1146.91Probable inorganic phosphate transporter 1-4 OS=Or... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3DE01FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK3DE01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871227 ID=FC871227; Name=FC871227; organism=Citrus sinensis; type=EST; length=448bp
TGAGATTTTCCCGGCGAGGCTAAGGTCAACTTGCCATGGCATATCAGCTG
CATCTGGCAAAGCGGGGGCCATTGTGGGTGCATTCGGGTTCTTGTACTTA
GCAGACACAAGTGGGGTGAAAAAAGCACTCCTAATTCTCGGTGGAGCCAA
CTTCTTAGGCATGTTGTTTACGTTCTTGGTACCGGAATCAAAGGGAAAAT
CATTGGAAGAAATGTCAGGTGAAGCTGAGGAAGAGAAAGGGACAACAGCA
ACAGTTCCAGTTTAAAATTAGGCCTTTGCATAGCTTAGTAGTAATATTTA
TGTTTCCTGTTTTAGCATTTACTTTTTACAGCACTATAAAAAGCTTTTAG
TGCTTGGACTTTGTTCTAAGTTGTACTTACGAGGCTGCCTTAAACTTTTC
ATATTGCAATCGAAGAATAAGGGAGTATTTTGGTTGCATGTTATTTGT
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