FC871223
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC871223 vs. ExPASy Swiss-Prot
Match: AMT2_ARATH (Ammonium transporter 2 OS=Arabidopsis thaliana GN=AMT2 PE=1 SV=2) HSP 1 Score: 229.18 bits (583), Expect = 1.664e-59 Identity = 108/151 (71.52%), Postives = 127/151 (84.11%), Query Frame = 1 Query: 241 YQHDLPEVPDWLNKGDSAWQMTASTLVGIQSMPGLLIIYASIVKKEWAVNSAFMVLYAFAAVLICWVLVCYRMAFGDQLLPFWGKGAPALGQKYLVGRARVPESTHEVDGKTVTTEPFYAMATLVYFQFTFAAITVILVAGSVLGRMNIRA 693 Y LPEVP+WLNKGD+AWQ+TA+TLVG+QSMPGL+I+YASIVKK+WAVNSAFM LYAFAAVL+CWVL+CY+MAFG++LLPFWGKG PA Q YL G+A++P S P++ MATLVYFQFTFAAIT ILVAGSVLGRMNI+A Sbjct: 5 YDPSLPEVPEWLNKGDNAWQLTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLLCWVLLCYKMAFGEELLPFWGKGGPAFDQGYLKGQAKIPNSN--------VAAPYFPMATLVYFQFTFAAITTILVAGSVLGRMNIKA 147
BLAST of FC871223 vs. ExPASy Swiss-Prot
Match: AMT21_ORYSJ (Ammonium transporter 2 member 1 OS=Oryza sativa subsp. japonica GN=AMT2-1 PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 2.938e-56 Identity = 107/151 (70.86%), Postives = 123/151 (81.46%), Query Frame = 1 Query: 241 YQHDLPEVPDWLNKGDSAWQMTASTLVGIQSMPGLLIIYASIVKKEWAVNSAFMVLYAFAAVLICWVLVCYRMAFGDQLLPFWGKGAPALGQKYLVGRARVPESTHEVDGKTVTTEPFYAMATLVYFQFTFAAITVILVAGSVLGRMNIRA 693 Y LP VPDWLNKGD+AWQ+TASTLVGIQSMPGL+++Y SIVKK+WAVNSAFM LYA+A+ L+ WVLV +RMAFGDQLLPFWGK AL Q YLVGRA +P + H G TEPFY ATLV FQF FAAIT++L+AGSVLGRMNI+A Sbjct: 7 YSASLPAVPDWLNKGDNAWQLTASTLVGIQSMPGLVVLYGSIVKKKWAVNSAFMALYAYASSLLVWVLVGFRMAFGDQLLPFWGKAGVALTQSYLVGRATLPATAH---GAIPRTEPFYPEATLVLFQFEFAAITLVLLAGSVLGRMNIKA 154
BLAST of FC871223 vs. ExPASy Swiss-Prot
Match: AMT22_ORYSJ (Ammonium transporter 2 member 2 OS=Oryza sativa subsp. japonica GN=AMT2-2 PE=2 SV=2) HSP 1 Score: 211.46 bits (537), Expect = 3.591e-54 Identity = 106/161 (65.84%), Postives = 126/161 (78.26%), Query Frame = 1 Query: 220 TPPIPKGYQHDLPEVPDWLNKGDSAWQMTASTLVGIQSMPGLLIIYASIVKKEWAVNSAFMVLYAFAAVLICWVLVCYRMAFGDQLLPFWGKGAPALGQKYLVGRARVPESTH-EVDG--KTVTTEPFYAMATLVYFQFTFAAITVILVAGSVLGRMNIRA 693 +PP P Y DLP VP WLNKGD+AWQ+ A+T VGIQSMPGL++IY SIVKK+WAVNSAFM LYA+A+ LI WVLV +RMAFGD+LLPFW K PAL Q +LV RA P + H DG +T TEPFYA A LV F+F FAAIT++L+AGS+LGRMNI+A Sbjct: 7 SPPQPGPYMPDLPAVPAWLNKGDTAWQLVAATFVGIQSMPGLVVIYGSIVKKKWAVNSAFMALYAYASTLIVWVLVGFRMAFGDRLLPFWAKAGPALTQDFLVQRAVFPATAHYGSDGTLETPRTEPFYAEAALVLFEFEFAAITLVLLAGSLLGRMNIKA 167
BLAST of FC871223 vs. ExPASy Swiss-Prot
Match: AMT33_ORYSJ (Ammonium transporter 3 member 3 OS=Oryza sativa subsp. japonica GN=AMT3-3 PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.179e-51 Identity = 96/158 (60.76%), Postives = 122/158 (77.22%), Query Frame = 1 Query: 229 IPKGYQHDLPEVPDWLNKGDSAWQMTASTLVGIQSMPGLLIIYASIVKKEWAVNSAFMVLYAFAAVLICWVLVCYRMAFGDQLLPFWGKGAPALGQKYLVGRARVPEST---HEVDGKTVTTEPFYAMATLVYFQFTFAAITVILVAGSVLGRMNIRA 693 IP YQ P PDWLNKGD+AWQMT++TLVG+QSMPGL+I+Y SIVKK+WA+NSAFM LYAFAAV ICWV+ Y M+FGD+LLPFWGK PALGQ +LV ++ + + H + +P Y +AT+VYFQ FA+IT+I++AGS+LGRMNI+A Sbjct: 6 IPMAYQ-TTPSSPDWLNKGDNAWQMTSATLVGLQSMPGLVILYGSIVKKKWAINSAFMALYAFAAVWICWVVWAYNMSFGDRLLPFWGKARPALGQSFLVAQSELTATAIRYHNGSAEAPMLKPLYPVATMVYFQCMFASITIIILAGSLLGRMNIKA 162
BLAST of FC871223 vs. ExPASy Swiss-Prot
Match: AMT31_ORYSJ (Ammonium transporter 3 member 1 OS=Oryza sativa subsp. japonica GN=AMT3-1 PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.663e-49 Identity = 96/159 (60.38%), Postives = 120/159 (75.47%), Query Frame = 1 Query: 241 YQHDLPEVPDWLNKGDSAWQMTASTLVGIQSMPGLLIIYASIVKKEWAVNSAFMVLYAFAAVLICWVLVCYRMAFGDQLLPFWGKGAPALGQKYLVGRARVPESTHEVDG--------KTVTTEPFYAMATLVYFQFTFAAITVILVAGSVLGRMNIRA 693 YQ VP+WLNKGD+AWQM ++TLVG+QS+PGL+I+Y SIVKK+WAVNSAFM LYAFAAV +CWV Y M+FG +LLPFWGK PALGQ +L+ +A +P++T G +T P Y MAT+VYFQ FAAIT+IL+AGS+LGRMNI+A Sbjct: 12 YQPSGMAVPEWLNKGDNAWQMISATLVGMQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVWLCWVTWGYNMSFGHKLLPFWGKARPALGQSFLLAQAVLPQTTQFYKGGGGADAVVETPWVNPLYPMATMVYFQCVFAAITLILLAGSLLGRMNIKA 170
BLAST of FC871223 vs. ExPASy Swiss-Prot
Match: AMT23_ORYSJ (Ammonium transporter 2 member 3 OS=Oryza sativa subsp. japonica GN=AMT2-3 PE=2 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 3.479e-49 Identity = 96/161 (59.63%), Postives = 122/161 (75.78%), Query Frame = 1 Query: 220 TPPIPKGYQHDLPEVPDWLNKGDSAWQMTASTLVGIQSMPGLLIIYASIVKKEWAVNSAFMVLYAFAAVLICWVLVCYRMAFGDQLLPFWGKGAPALGQKYLVGRARVPESTH-EVDG--KTVTTEPFYAMATLVYFQFTFAAITVILVAGSVLGRMNIRA 693 +P P Y P VP+WLN GD+ WQ+ A+T VG+QSMPGL+++Y SIVKK+WAVNSAFM LYA+A+ LI WVLV +RMAFGD+LLPFWGK AL + +LV RA VP + H DG ++ TEPFY A++V FQF AAIT++L+AGS+LGRMNI+A Sbjct: 3 SPTRPGPYMPRPPAVPEWLNTGDNGWQLAAATFVGLQSMPGLVVLYGSIVKKKWAVNSAFMALYAYASTLIVWVLVGFRMAFGDRLLPFWGKAGAALTEGFLVARASVPATAHYGKDGALESPRTEPFYPEASMVLFQFELAAITLVLLAGSLLGRMNIKA 163
BLAST of FC871223 vs. ExPASy Swiss-Prot
Match: AMT32_ORYSJ (Ammonium transporter 3 member 2 OS=Oryza sativa subsp. japonica GN=AMT3-2 PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 4.543e-49 Identity = 96/159 (60.38%), Postives = 119/159 (74.84%), Query Frame = 1 Query: 229 IPKGYQHDLP-EVPDWLNKGDSAWQMTASTLVGIQSMPGLLIIYASIVKKEWAVNSAFMVLYAFAAVLICWVLVCYRMAFGDQLLPFWGKGAPALGQKYLVGRARVPESTH-EVDG--KTVTTEPFYAMATLVYFQFTFAAITVILVAGSVLGRMNIRA 693 +P YQ + V DWLNKGD+AWQ+ A+T+VG+QS+PGL+++Y +VKK+WAVNSAFM LYAFAAV ICWV Y M+FG++LLP WGK PAL Q LVGRA +P + H DG +T EP Y MAT+VYFQ FAAIT+ILVAGS+LGRM+ A Sbjct: 8 VPLAYQGNTSASVADWLNKGDNAWQLVAATVVGLQSVPGLVVLYGGVVKKKWAVNSAFMALYAFAAVWICWVTWAYNMSFGEKLLPIWGKARPALDQGLLVGRAALPATVHYRADGSVETAAVEPLYPMATVVYFQCVFAAITLILVAGSLLGRMSFLA 166
BLAST of FC871223 vs. ExPASy Swiss-Prot
Match: Y663_METTH (Putative ammonium transporter MTH_663 OS=Methanobacterium thermoautotrophicum GN=MTH_663 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.129e-15 Identity = 49/140 (35.00%), Postives = 70/140 (50.00%), Query Frame = 1 Query: 274 LNKGDSAWQMTASTLVGIQSMPGLLIIYASIVKKEWAVNSAFMVLYAFAAVLICWVLVCYRMAFGDQLLPFWGKGAPALGQKYLVGRARVPESTHEVDGKTVTTEPFYAMATLVYFQFTFAAITVILVAGSVLGRMNIRA 693 LN GD+AW + ++ LV + ++PG+ + Y + KKE +N+ F+ L AFA I WVL Y+ AFG ++ F G L V A P + FQ TFAAITV L++G+V+ RM A Sbjct: 10 LNSGDTAWMLVSTALVMLMTVPGVALFYGGLTKKENVLNTMFLSLIAFAVTSIIWVLYGYQFAFGADIMGFIGSPVNLLMNGVGVNTA-------------AALAPTIPDFLYIAFQLTFAAITVALISGAVVERMKFSA 136
BLAST of FC871223 vs. ExPASy Swiss-Prot
Match: AMT_AQUAE (Ammonia channel OS=Aquifex aeolicus GN=amt PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.745e-14 Identity = 45/140 (32.14%), Postives = 73/140 (52.14%), Query Frame = 1 Query: 274 LNKGDSAWQMTASTLVGIQSMPGLLIIYASIVKKEWAVNSAFMVLYAFAAVLICWVLVCYRMAFGDQLLPFWGKGAPALGQKYLVGRARVPESTHEVDGKTVTTEPFYAMATLVYFQFTFAAITVILVAGSVLGRMNIRA 693 L+ G++AW + AS LV ++PGL + Y + K + +N+ M AFA V + W+ V Y +A+GD + F G +Y++G+ + G + ++ Y + FQ TFA IT L++GS +GRM A Sbjct: 25 LDTGNTAWMLVASALVVFMTVPGLALFYGGLDKSKSILNTIAMSFSAFAVVTLTWIFVGYSVAYGDDIFGFIGNPF-----QYVLGKG--------ISG--INSDTGYPALLDLMFQLTFATITTALISGSFVGRMKFSA 149
BLAST of FC871223 vs. ExPASy Swiss-Prot
Match: AMT_MYCTU (Probable ammonia channel OS=Mycobacterium tuberculosis GN=amt PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.760e-11 Identity = 46/151 (30.46%), Postives = 70/151 (46.36%), Query Frame = 1 Query: 244 QHDLPEVPDWLNKGDSAWQMTASTLVGIQSMPGLLIIYASIVKKEWAVNSAFMVLYAFAAVLICWVLVCYRMAFGDQLLPFWGKGAPALGQKYLVG-RARVPESTHEVDGKTVTTEPFYAMATLVYFQFTFAAITVILVAGSVLGRMNIRA 693 Q + VPD GD+AW + +S LV + + PGL Y +V+ + +N M + A V + W L Y +AFGD + G + G K L+G A + + + + V FQ FA ITV L++G+V R+ A Sbjct: 3 QFPIMGVPDG---GDTAWMLVSSALVLLMT-PGLAFFYGGMVRSKSVLNMIMMSISAMGVVTVLWALYGYSIAFGDDVGNIAGNPSQYWGLKGLIGVNAVAADPSTQTAAVNIPLAGTLPATVFVAFQLMFAIITVALISGAVADRLKFGA 149 The following BLAST results are available for this feature:
BLAST of FC871223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871223 ID=FC871223; Name=FC871223; organism=Citrus sinensis; type=EST; length=698bpback to top |