FC871222

Overview
NameFC871222
Unique NameFC871222
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length661
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5917 contig Csv1_Contig5917:444..1104. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of FC871222 vs. ExPASy Swiss-Prot
Match: PLZ12_LUPPO (Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE=2 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 1.880e-78
Identity = 148/174 (85.06%), Postives = 161/174 (92.53%), Query Frame = 2 
Query:    2 EVAKAVLEELEKVMGAYGYSIEHILMVDIIPDPAVRKAMNEINAAQRLQLASVYKGEAEKILQVKRAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSHKVEGASAKEVMDLIMITQYFDTIKDLGNSSNNTTVFLPHGPGHVRDISDQIRNGLMEASAAQVDG*VIFTRYC 523
            EVAK+VLEELEKVMG YGY+IEHILMVDIIPD +VR+AMNEINAAQR+QLAS+YKGEAEKILQVKRAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSHKVEG SAKEVMDLIMITQYFDTIKDLGNSS NTTVF+PHGPGHVRDI +QIRNGLME++ A ++      R+C
Sbjct:   12 EVAKSVLEELEKVMGEYGYNIEHILMVDIIPDDSVRRAMNEINAAQRMQLASLYKGEAEKILQVKRAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSHKVEGTSAKEVMDLIMITQYFDTIKDLGNSSKNTTVFIPHGPGHVRDIGEQIRNGLMESARAGIN----IERFC 181
The following BLAST results are available for this feature:
BLAST of FC871222 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PLZ12_LUPPO1.880e-7885.06Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAK2AG06FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK2AG06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871222 ID=FC871222; Name=FC871222; organism=Citrus sinensis; type=EST; length=661bp
CGAAGTTGCTAAAGCTGTTTTGGAGGAACTTGAGAAGGTGATGGGTGCAT
ATGGATATAGCATTGAGCACATATTGATGGTAGACATTATACCTGATCCT
GCTGTGCGCAAGGCAATGAATGAGATCAATGCGGCTCAAAGGCTTCAGCT
TGCTAGTGTATACAAAGGGGAAGCTGAGAAGATTCTCCAAGTTAAAAGAG
CAGAAGCTGAAGCTGAAGCCAAGTACCTTGGTGGCGTAGGTGTGGCCAGG
CAACGGCAGGCAATAACAGATGGTTTGCGAGAGAACATTTTGAACTTCTC
TCATAAGGTAGAAGGCGCCTCAGCTAAGGAGGTTATGGATCTCATCATGA
TCACTCAGTACTTTGACACGATCAAGGACCTTGGGAACTCATCAAATAAC
ACAACTGTCTTTCTACCCCATGGTCCTGGTCATGTTCGGGATATCAGCGA
TCAGATACGCAACGGGCTGATGGAGGCATCTGCTGCTCAAGTAGATGGTT
GAGTGATTTTTACCCGCTATTGTCAATACTAGTTCTTTCTACAGCATATG
ATTGCTTAAGCTACATTGAATTTACAGAGATGCTAATAATATAGGATGGT
ATTCATACTTCGATGTATAGTTGTTTTTCCCTGCTGCCAAGAGCTACGAA
TAAACAGGATT
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