DR912119

Overview
NameDR912119
Unique NameDR912119
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length174
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR912119 vs. ExPASy Swiss-Prot
Match: VATF_ARATH (V-type proton ATPase subunit F OS=Arabidopsis thaliana GN=VHA-F PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.183e-22
Identity = 46/57 (80.70%), Postives = 56/57 (98.25%), Query Frame = 2
Query:    2 DSKTTIKQIEDAFKEFTSREDIAIVLISQYVANRIRFLVDSHNKPIPAILEIPSKDH 172
            DSKTT++QIEDAFKEF++R+DIAI+L+SQY+AN IRFLVDS+NKP+PAILEIPSKDH
Sbjct:   47 DSKTTVRQIEDAFKEFSARDDIAIILLSQYIANMIRFLVDSYNKPVPAILEIPSKDH 103          
BLAST of DR912119 vs. ExPASy Swiss-Prot
Match: VATF_DICDI (V-type proton ATPase subunit F OS=Dictyostelium discoideum GN=vatF PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.228e-13
Identity = 35/57 (61.40%), Postives = 47/57 (82.46%), Query Frame = 2
Query:    2 DSKTTIKQIEDAFKEFTSREDIAIVLISQYVANRIRFLVDSHNKPIPAILEIPSKDH 172
            DSKT+  +IE AFK FT+R DIAI++I+Q VA+ IR+L+D +++ IP ILEIPSKDH
Sbjct:   44 DSKTSQAKIETAFKSFTTRNDIAIIMITQKVADEIRYLIDEYHQVIPTILEIPSKDH 100          
BLAST of DR912119 vs. ExPASy Swiss-Prot
Match: VATF_RAT (V-type proton ATPase subunit F OS=Rattus norvegicus GN=Atp6v1f PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.573e-13
Identity = 30/57 (52.63%), Postives = 45/57 (78.95%), Query Frame = 2
Query:    2 DSKTTIKQIEDAFKEFTSREDIAIVLISQYVANRIRFLVDSHNKPIPAILEIPSKDH 172
            +  TTI +IED F++F +R+DI I+LI+QY+A  +R  +D+H + IPA+LEIPSK+H
Sbjct:   40 EKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQRSIPAVLEIPSKEH 96          
BLAST of DR912119 vs. ExPASy Swiss-Prot
Match: VATF_MOUSE (V-type proton ATPase subunit F OS=Mus musculus GN=Atp6v1f PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 3.573e-13
Identity = 30/57 (52.63%), Postives = 45/57 (78.95%), Query Frame = 2
Query:    2 DSKTTIKQIEDAFKEFTSREDIAIVLISQYVANRIRFLVDSHNKPIPAILEIPSKDH 172
            +  TTI +IED F++F +R+DI I+LI+QY+A  +R  +D+H + IPA+LEIPSK+H
Sbjct:   40 EKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQRSIPAVLEIPSKEH 96          
BLAST of DR912119 vs. ExPASy Swiss-Prot
Match: VATF_BOVIN (V-type proton ATPase subunit F OS=Bos taurus GN=ATP6V1F PE=3 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 3.573e-13
Identity = 30/57 (52.63%), Postives = 45/57 (78.95%), Query Frame = 2
Query:    2 DSKTTIKQIEDAFKEFTSREDIAIVLISQYVANRIRFLVDSHNKPIPAILEIPSKDH 172
            +  TTI +IED F++F +R+DI I+LI+QY+A  +R  +D+H + IPA+LEIPSK+H
Sbjct:   40 EKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQRSIPAVLEIPSKEH 96          
BLAST of DR912119 vs. ExPASy Swiss-Prot
Match: VATF_HUMAN (V-type proton ATPase subunit F OS=Homo sapiens GN=ATP6V1F PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 4.667e-13
Identity = 30/57 (52.63%), Postives = 45/57 (78.95%), Query Frame = 2
Query:    2 DSKTTIKQIEDAFKEFTSREDIAIVLISQYVANRIRFLVDSHNKPIPAILEIPSKDH 172
            +  TTI +IED F++F +R+DI I+LI+QY+A  +R  +D+H + IPA+LEIPSK+H
Sbjct:   40 EKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEH 96          
BLAST of DR912119 vs. ExPASy Swiss-Prot
Match: VATF_CAEEL (Probable V-type proton ATPase subunit F OS=Caenorhabditis elegans GN=vha-9 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.095e-13
Identity = 31/56 (55.36%), Postives = 47/56 (83.93%), Query Frame = 2
Query:    2 DSKTTIKQIEDAFKEFTSREDIAIVLISQYVANRIRFLVDSHNKPIPAILEIPSKD 169
            D +TT+++IE+AF  F +R+DIAI+LI+Q++A  IR+ VD+H + IPA+LEIPSK+
Sbjct:   42 DKQTTVQEIEEAFNGFCARDDIAIILINQHIAEMIRYAVDNHTQSIPAVLEIPSKE 97          
BLAST of DR912119 vs. ExPASy Swiss-Prot
Match: VATF_ANOGA (V-type proton ATPase subunit F OS=Anopheles gambiae GN=Vha14 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 1.358e-12
Identity = 32/57 (56.14%), Postives = 40/57 (70.18%), Query Frame = 2
Query:    2 DSKTTIKQIEDAFKEFTSREDIAIVLISQYVANRIRFLVDSHNKPIPAILEIPSKDH 172
            D  T + +IED FK F  R+DI I+LI+Q  A  IR ++DSH  P PA+LEIPSKDH
Sbjct:   44 DKNTAVSEIEDCFKRFIKRDDIDIILINQNYAELIRHVIDSHTAPTPAVLEIPSKDH 100          
BLAST of DR912119 vs. ExPASy Swiss-Prot
Match: VATF1_DROME (V-type proton ATPase subunit F 1 OS=Drosophila melanogaster GN=Vha14 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.358e-12
Identity = 30/57 (52.63%), Postives = 41/57 (71.93%), Query Frame = 2
Query:    2 DSKTTIKQIEDAFKEFTSREDIAIVLISQYVANRIRFLVDSHNKPIPAILEIPSKDH 172
            D  T + ++ED FK F  R+DI I+LI+Q  A  IR ++D+H  P+PA+LEIPSKDH
Sbjct:   44 DKNTAVSELEDCFKRFLKRDDIDIILINQNCAELIRHVIDAHTSPVPAVLEIPSKDH 100          
BLAST of DR912119 vs. ExPASy Swiss-Prot
Match: VATF1_DROPS (V-type proton ATPase subunit F 1 OS=Drosophila pseudoobscura pseudoobscura GN=Vha14 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.773e-12
Identity = 30/57 (52.63%), Postives = 41/57 (71.93%), Query Frame = 2
Query:    2 DSKTTIKQIEDAFKEFTSREDIAIVLISQYVANRIRFLVDSHNKPIPAILEIPSKDH 172
            D  T + ++ED FK F  R+DI I+LI+Q  A  IR ++D+H  P+PA+LEIPSKDH
Sbjct:   44 DKNTPVSELEDCFKRFLKRDDIDIILINQNCAELIRHVIDAHTSPVPAVLEIPSKDH 100          
The following BLAST results are available for this feature:
BLAST of DR912119 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
VATF_ARATH7.183e-2280.70V-type proton ATPase subunit F OS=Arabidopsis thal... [more]
VATF_DICDI1.228e-1361.40V-type proton ATPase subunit F OS=Dictyostelium di... [more]
VATF_RAT3.573e-1352.63V-type proton ATPase subunit F OS=Rattus norvegicu... [more]
VATF_MOUSE3.573e-1352.63V-type proton ATPase subunit F OS=Mus musculus GN=... [more]
VATF_BOVIN3.573e-1352.63V-type proton ATPase subunit F OS=Bos taurus GN=AT... [more]
VATF_HUMAN4.667e-1352.63V-type proton ATPase subunit F OS=Homo sapiens GN=... [more]
VATF_CAEEL6.095e-1355.36Probable V-type proton ATPase subunit F OS=Caenorh... [more]
VATF_ANOGA1.358e-1256.14V-type proton ATPase subunit F OS=Anopheles gambia... [more]
VATF1_DROME1.358e-1252.63V-type proton ATPase subunit F 1 OS=Drosophila mel... [more]
VATF1_DROPS1.773e-1252.63V-type proton ATPase subunit F 1 OS=Drosophila pse... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_20247 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-10_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR912119 ID=DR912119; Name=DR912119; organism=Citrus sinensis; type=EST; length=174bp
GGACTCAAAAACAACTATTAAGCAAATTGAAGATGCATTTAAAGAGTTCA
CATCCAGGGAGGATATCGCAATAGTTCTAATTAGCCAATATGTTGCAAAC
AGGATAAGGTTTTTGGTTGATAGCCATAACAAGCCGATCCCTGCAATTTT
GGAGATACCTTCCAAGGATCATCC
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